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Lag0035038 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035038
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr3:13932909..13933211
RNA-Seq ExpressionLag0035038
SyntenyLag0035038
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]2.6e-0634.69Show/hide
Query:  SFSFVDINRVYQVKTPLNLRGNDAINDPTTKQLKEALKIVARKGVQWKESQTKVKSLVPSDLKPEPAVWFHFTKNRLMPTTHDNTISVGRLMLFSTVL
        S+S   IN V+ +  P++   ++ I + T + L   L+ VA  G +W  S     + + S L P   VW+HF K+RL+PTTH  T+S  R++L  ++L
Subjt:  SFSFVDINRVYQVKTPLNLRGNDAINDPTTKQLKEALKIVARKGVQWKESQTKVKSLVPSDLKPEPAVWFHFTKNRLMPTTHDNTISVGRLMLFSTVL

XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]2.3e-1040.22Show/hide
Query:  SFSFVDINRVYQVKTPLNLRGNDAINDPTTKQLKEALKIVARKGVQWKESQTKVKSLVPSDLKPEPAVWFHFTKNRLMPTTHDNTISVGRLM
        SFS  DIN +YQ+K      GN  I+DPT +Q+++AL+++ + G++W  S   V +L    L  E  +W +  K RL+ TTHD T+S  R+M
Subjt:  SFSFVDINRVYQVKTPLNLRGNDAINDPTTKQLKEALKIVARKGVQWKESQTKVKSLVPSDLKPEPAVWFHFTKNRLMPTTHDNTISVGRLM

XP_038888747.1 vicilin-like seed storage protein At2g18540 [Benincasa hispida]3.8e-1035.87Show/hide
Query:  FSFVDINRVYQVKTPLNLRGNDAINDPTTKQLKEALKIVARKGVQWKESQTKVKSLVPSDLKPEPAVWFHFTKNRLMPTTHDNTISVGRLML
        FS  DIN +Y++K  L+  GN  I+DP    +++ L+++ + G QW  S   +K+L  + L PE  +W +  K RL+PT+H+ T+S   L++
Subjt:  FSFVDINRVYQVKTPLNLRGNDAINDPTTKQLKEALKIVARKGVQWKESQTKVKSLVPSDLKPEPAVWFHFTKNRLMPTTHDNTISVGRLML

XP_038898613.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120086174 [Benincasa hispida]2.8e-0836.05Show/hide
Query:  FSFVDINRVYQVKTPLNLRGNDAINDPTTKQLKEALKIVARKGVQWKESQTKVKSLVPSDLKPEPAVWFHFTKNRLMPTTHDNTIS
        FS  +IN +YQ++   +  GN  I+DPT + ++ ALK++A+ G +W  S   +++L    L  +  +W +  K +L+PTTHD T+S
Subjt:  FSFVDINRVYQVKTPLNLRGNDAINDPTTKQLKEALKIVARKGVQWKESQTKVKSLVPSDLKPEPAVWFHFTKNRLMPTTHDNTIS

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]5.9e-1138.46Show/hide
Query:  FSFVDINRVYQVKTPLNLRGNDAINDPTTKQLKEALKIVARKGVQWKESQTKVKSLVPSDLKPEPAVWFHFTKNRLMPTTHDNTISVGRLM
        FS  DIN +Y++K   +  GN  I+DP  +++++AL+ + + G QW  S   +K+L  S L PE  +W +  K R++PT+HD T+S  R+M
Subjt:  FSFVDINRVYQVKTPLNLRGNDAINDPTTKQLKEALKIVARKGVQWKESQTKVKSLVPSDLKPEPAVWFHFTKNRLMPTTHDNTISVGRLM

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)6.2e-0634.69Show/hide
Query:  SFSFVDINRVYQVKTPLNLRGNDAINDPTTKQLKEALKIVARKGVQWKESQTKVKSLVPSDLKPEPAVWFHFTKNRLMPTTHDNTISVGRLMLFSTVL
        S+S   IN V+ +  P++   ++ I + T   L   L+ VA  G +W  S     + + S L P   VWFHF K+ L+PTTH  T+S  R++L  ++L
Subjt:  SFSFVDINRVYQVKTPLNLRGNDAINDPTTKQLKEALKIVARKGVQWKESQTKVKSLVPSDLKPEPAVWFHFTKNRLMPTTHDNTISVGRLMLFSTVL

A0A2P5BCG4 Uncharacterized protein (Fragment)1.2e-0634.69Show/hide
Query:  SFSFVDINRVYQVKTPLNLRGNDAINDPTTKQLKEALKIVARKGVQWKESQTKVKSLVPSDLKPEPAVWFHFTKNRLMPTTHDNTISVGRLMLFSTVL
        S+S   IN V+ +  P++   ++ I + T + L   L+ VA  G +W  S     + + S L P   VW+HF K+RL+PTTH  T+S  R++L  ++L
Subjt:  SFSFVDINRVYQVKTPLNLRGNDAINDPTTKQLKEALKIVARKGVQWKESQTKVKSLVPSDLKPEPAVWFHFTKNRLMPTTHDNTISVGRLMLFSTVL

A0A2P5CPE8 Uncharacterized protein2.8e-0635.11Show/hide
Query:  INRVYQVKTPLNLRGN--DAINDPTTKQLKEALKIVARKGVQWKESQTKVKSLVPSDLKPEPAVWFHFTKNRLMPTTHDNTISVGRLMLFSTVL
        IN +Y +  P++      +AI +P   +L   L+ VA  G +W  S     + + S L P   VW+HF K+RL+PTTH  T+S  R++L  ++L
Subjt:  INRVYQVKTPLNLRGN--DAINDPTTKQLKEALKIVARKGVQWKESQTKVKSLVPSDLKPEPAVWFHFTKNRLMPTTHDNTISVGRLMLFSTVL

A0A5A7U0U4 Uncharacterized protein1.6e-0635.87Show/hide
Query:  INRVYQVKTPLNLRGNDAINDPTTKQLKEALKIVARKGVQWKESQTKVKSLVPSDLKPEPAVWFHFTKNRLMPTTHDNTISVGRLMLFSTVL
        IN +Y +K   N  G+    +P  + L+EAL+     G +W +  T +  L P +L  E +VW  F K  +MPT HDN IS+ R+ML   ++
Subjt:  INRVYQVKTPLNLRGNDAINDPTTKQLKEALKIVARKGVQWKESQTKVKSLVPSDLKPEPAVWFHFTKNRLMPTTHDNTISVGRLMLFSTVL

A0A5D3CW17 Uncharacterized protein3.6e-0636.78Show/hide
Query:  INRVYQVKTPLNLRGNDAINDPTTKQLKEALKIVARKGVQWKESQTKVKSLVPSDLKPEPAVWFHFTKNRLMPTTHDNTISVGRLML
        IN +Y +K   N  G+    +P  + L++AL+ +   G +W    T+   L P+DL  E +VW  F K  +MPT HD+TIS+  +ML
Subjt:  INRVYQVKTPLNLRGNDAINDPTTKQLKEALKIVARKGVQWKESQTKVKSLVPSDLKPEPAVWFHFTKNRLMPTTHDNTISVGRLML

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAGTTTCTCTTTTGTGGATATTAATAGAGTGTATCAGGTCAAAACACCTTTGAATCTGAGGGGCAATGATGCAATCAATGACCCCACGACCAAGCAGCTGAAGGA
AGCACTCAAAATAGTGGCCAGGAAAGGAGTGCAATGGAAAGAGTCACAAACGAAAGTGAAGTCCTTGGTGCCAAGTGACTTAAAACCCGAACCGGCAGTGTGGTTTCACT
TCACCAAGAATCGTCTTATGCCGACTACCCATGACAACACCATTTCTGTGGGGAGGCTCATGCTTTTCTCTACAGTATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAGTTTCTCTTTTGTGGATATTAATAGAGTGTATCAGGTCAAAACACCTTTGAATCTGAGGGGCAATGATGCAATCAATGACCCCACGACCAAGCAGCTGAAGGA
AGCACTCAAAATAGTGGCCAGGAAAGGAGTGCAATGGAAAGAGTCACAAACGAAAGTGAAGTCCTTGGTGCCAAGTGACTTAAAACCCGAACCGGCAGTGTGGTTTCACT
TCACCAAGAATCGTCTTATGCCGACTACCCATGACAACACCATTTCTGTGGGGAGGCTCATGCTTTTCTCTACAGTATTATGA
Protein sequenceShow/hide protein sequence
MDSFSFVDINRVYQVKTPLNLRGNDAINDPTTKQLKEALKIVARKGVQWKESQTKVKSLVPSDLKPEPAVWFHFTKNRLMPTTHDNTISVGRLMLFSTVL