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Lag0035055 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035055
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr3:14224042..14230192
RNA-Seq ExpressionLag0035055
SyntenyLag0035055
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG55322.1 hypothetical protein EZV62_020578 [Acer yangbiense]6.6e-0537.5Show/hide
Query:  MGLVPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHRERNQAAHRLARLAIAQWSDEVWMETCP
        +GL+P +LE+D   V + ++ +   +SE+G++I D L  F S      +FV R  N+ AH LARLA+      VW+  CP
Subjt:  MGLVPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHRERNQAAHRLARLAIAQWSDEVWMETCP

XP_022135942.1 uncharacterized protein LOC111007775 [Momordica charantia]7.8e-0643.59Show/hide
Query:  GLVPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQV--LFQFVHRERNQAAHRLARLAIAQWSDEVWME
        GL+P  +ETDSS+VF +L  + ED SE+G ++A ++    S+L +   F FV+RE N  AH LAR+ +   S  VW+E
Subjt:  GLVPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQV--LFQFVHRERNQAAHRLARLAIAQWSDEVWME

XP_022140628.1 uncharacterized protein LOC111011237 [Momordica charantia]1.3e-0845Show/hide
Query:  MGLVPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHRERNQAAHRLARLAIAQWSDEVWMETCP
        +G+ P ILETDSSR+F + ++  ED+SE G I+  A   +  +L   F FV RE N+AAH LAR A+      +WME  P
Subjt:  MGLVPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHRERNQAAHRLARLAIAQWSDEVWMETCP

XP_042939569.1 uncharacterized protein LOC122274612 [Carya illinoinensis]2.0e-0642.11Show/hide
Query:  ILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHRERNQAAHRLARLAIAQWSDEVWMETCPRF
        I E D+  V   +NRE ED+S +G +I D  + F  N     QF HRE N  AH LAR A+     +VW+E  P F
Subjt:  ILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHRERNQAAHRLARLAIAQWSDEVWMETCPRF

XP_042969149.1 uncharacterized protein LOC122301849 [Carya illinoinensis]6.6e-0541.46Show/hide
Query:  ILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHRERNQAAHRLARLAIAQWSDEVWMETCPRF--EGLD
        I E D+  V   + RE ED+S LG +I DA   F        QF HRE+N  AH LA+ A+      VW+E  P F  +GLD
Subjt:  ILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHRERNQAAHRLARLAIAQWSDEVWMETCPRF--EGLD

TrEMBL top hitse value%identityAlignment
A0A2P6S796 Putative ribonuclease H-like domain-containing protein3.2e-0542.68Show/hide
Query:  GLVPTILETDSSRVFQILNREREDISELGMIIADA---LMAFPSNLQVLFQFVHRERNQAAHRLARLAIAQWSDEVWMETCP
        G++   +ETD + V   L  + ED+SE+G II D    L A PS   V  Q ++RE N  AHRLA LA + + DE W+E  P
Subjt:  GLVPTILETDSSRVFQILNREREDISELGMIIADA---LMAFPSNLQVLFQFVHRERNQAAHRLARLAIAQWSDEVWMETCP

A0A5C7HFZ0 Uncharacterized protein3.2e-0537.5Show/hide
Query:  MGLVPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHRERNQAAHRLARLAIAQWSDEVWMETCP
        +GL+P +LE+D   V + ++ +   +SE+G++I D L  F S      +FV R  N+ AH LARLA+      VW+  CP
Subjt:  MGLVPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHRERNQAAHRLARLAIAQWSDEVWMETCP

A0A5C7ITL2 RNase H domain-containing protein7.1e-0537.5Show/hide
Query:  MGLVPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHRERNQAAHRLARLAIAQWSDEVWMETCP
        +GL+PT+LE+D+  V + +  +   +SE+G++I D L  F S       FV R  N+  H LARLA+      VW+  CP
Subjt:  MGLVPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHRERNQAAHRLARLAIAQWSDEVWMETCP

A0A6J1C467 uncharacterized protein LOC1110077753.8e-0643.59Show/hide
Query:  GLVPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQV--LFQFVHRERNQAAHRLARLAIAQWSDEVWME
        GL+P  +ETDSS+VF +L  + ED SE+G ++A ++    S+L +   F FV+RE N  AH LAR+ +   S  VW+E
Subjt:  GLVPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQV--LFQFVHRERNQAAHRLARLAIAQWSDEVWME

A0A6J1CIF1 uncharacterized protein LOC1110112376.2e-0945Show/hide
Query:  MGLVPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHRERNQAAHRLARLAIAQWSDEVWMETCP
        +G+ P ILETDSSR+F + ++  ED+SE G I+  A   +  +L   F FV RE N+AAH LAR A+      +WME  P
Subjt:  MGLVPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHRERNQAAHRLARLAIAQWSDEVWMETCP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTGGTTCCAACAATTCTTGAGACGGATTCGAGTAGAGTTTTCCAGATCCTTAATCGAGAACGTGAGGATATTTCTGAGCTAGGTATGATTATTGCAGATGCACT
AATGGCTTTTCCCTCTAATTTGCAGGTACTGTTTCAGTTCGTTCACCGTGAAAGGAATCAGGCGGCGCACCGATTGGCGAGGTTAGCAATAGCCCAGTGGAGTGATGAGG
TTTGGATGGAGACTTGTCCTAGGTTTGAAGGCCTAGATCGACGTTATGGGGTTCATAAGTCTGTTGTCACTCCGATAGGGGTAAGTCGGTCTCCCTTGCGAAACCTTAGT
TGCCAGTGTAGGGGGAAGATAGGTGGAGGATCCCATAAATCTGTTGCTGGGCCATTAGAGACTCCTTTAGGTGGTGAGCCTAAGGCCACAAGCCTACATGGAACATTTCA
TATTTATCTAGGACGCAAAAGGATGGAGCCGCCGAAAGTCGCCGCCGCCGCAGCTCCTCCACCACCGCCCGACGCCGCCGGTATTTTCTCTCTCTCTCTCTCTCTCACTA
CAGCCCGCCGCCCTCGCCGCCGCTCGCCTCCTGTCGCCGTGAACCGCCCTCGCCGCTGCTGTACGTCAAGCCAACATCGCTCCGCCGCCGTCGCACGAATCTGTCTGCCG
CGCCACCATCACCTCTTTCCGCCGTCGATTTCTTCAGTTGTGCCGTTGCCGTCTTCAGCCAAACAGCTGTACGCCGCCTCAAGTCGTTTGAGATCGAATATGGATGTGGT
CTGCTTGTGCTATGTAATGGGTGAAAGTGCTGGACTGTTGTATATTATATGTTGTCTGGTGTTGTTGGTGGTCGACGGGGAGTTGTGTTTTATCTCTGTTAGGAGTGTTG
TTGCCGCCTTCGTTTCTTGTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTGGTTCCAACAATTCTTGAGACGGATTCGAGTAGAGTTTTCCAGATCCTTAATCGAGAACGTGAGGATATTTCTGAGCTAGGTATGATTATTGCAGATGCACT
AATGGCTTTTCCCTCTAATTTGCAGGTACTGTTTCAGTTCGTTCACCGTGAAAGGAATCAGGCGGCGCACCGATTGGCGAGGTTAGCAATAGCCCAGTGGAGTGATGAGG
TTTGGATGGAGACTTGTCCTAGGTTTGAAGGCCTAGATCGACGTTATGGGGTTCATAAGTCTGTTGTCACTCCGATAGGGGTAAGTCGGTCTCCCTTGCGAAACCTTAGT
TGCCAGTGTAGGGGGAAGATAGGTGGAGGATCCCATAAATCTGTTGCTGGGCCATTAGAGACTCCTTTAGGTGGTGAGCCTAAGGCCACAAGCCTACATGGAACATTTCA
TATTTATCTAGGACGCAAAAGGATGGAGCCGCCGAAAGTCGCCGCCGCCGCAGCTCCTCCACCACCGCCCGACGCCGCCGGTATTTTCTCTCTCTCTCTCTCTCTCACTA
CAGCCCGCCGCCCTCGCCGCCGCTCGCCTCCTGTCGCCGTGAACCGCCCTCGCCGCTGCTGTACGTCAAGCCAACATCGCTCCGCCGCCGTCGCACGAATCTGTCTGCCG
CGCCACCATCACCTCTTTCCGCCGTCGATTTCTTCAGTTGTGCCGTTGCCGTCTTCAGCCAAACAGCTGTACGCCGCCTCAAGTCGTTTGAGATCGAATATGGATGTGGT
CTGCTTGTGCTATGTAATGGGTGAAAGTGCTGGACTGTTGTATATTATATGTTGTCTGGTGTTGTTGGTGGTCGACGGGGAGTTGTGTTTTATCTCTGTTAGGAGTGTTG
TTGCCGCCTTCGTTTCTTGTTCTTGA
Protein sequenceShow/hide protein sequence
MGLVPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHRERNQAAHRLARLAIAQWSDEVWMETCPRFEGLDRRYGVHKSVVTPIGVSRSPLRNLS
CQCRGKIGGGSHKSVAGPLETPLGGEPKATSLHGTFHIYLGRKRMEPPKVAAAAAPPPPPDAAGIFSLSLSLTTARRPRRRSPPVAVNRPRRCCTSSQHRSAAVARICLP
RHHHLFPPSISSVVPLPSSAKQLYAASSRLRSNMDVVCLCYVMGESAGLLYIICCLVLLVVDGELCFISVRSVVAAFVSCS