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Lag0035089 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035089
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr3:14745006..14745437
RNA-Seq ExpressionLag0035089
SyntenyLag0035089
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PQQ10307.1 uncharacterized protein Pyn_17609 [Prunus yedoensis var. nudiflora]2.7e-0740.85Show/hide
Query:  TFKSAWNIPNGLIVERLGTNLFLFTLRSEDEIARVLRQGTWLFDKYLLVLSRPISMVKPTTMEFKFSTFWV
        T    WN    ++V+ LG NLFLF   +E +  +VLR G W FDK L++L  P   V P+ M  K++ FW+
Subjt:  TFKSAWNIPNGLIVERLGTNLFLFTLRSEDEIARVLRQGTWLFDKYLLVLSRPISMVKPTTMEFKFSTFWV

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.8e-1130.15Show/hide
Query:  MALEDMMSKWENFNLTNDEESTAV--------------------RWIDRR-------RWTFKSAWNIP-NGLIVERLGTNLFLFTLRSEDEIARVLRQGT
        MA  +++ +W+NF LT++E+  AV                    + + +R       + T K AW +      V+ +G N+FLF      +  R+LR G 
Subjt:  MALEDMMSKWENFNLTNDEESTAV--------------------RWIDRR-------RWTFKSAWNIP-NGLIVERLGTNLFLFTLRSEDEIARVLRQGT

Query:  WLFDKYLLVLSRPISMVKPTTMEFKFSTFWVHFCDL
        W FD+ L+++  P+S+ KP  M+F+  + WVHF DL
Subjt:  WLFDKYLLVLSRPISMVKPTTMEFKFSTFWVHFCDL

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.4e-0829.55Show/hide
Query:  EDMMSKWENFNLTNDEESTA---------------------------VRWIDRRRWTFKSAWNIPNGLIVERLGTNLFLFTLRSEDEIARVLRQGTWLFD
        E++++ W+ F LT++E+  A                           +   D        AW + + L VE +G NLFLF    E ++ RV++ G W FD
Subjt:  EDMMSKWENFNLTNDEESTA---------------------------VRWIDRRRWTFKSAWNIPNGLIVERLGTNLFLFTLRSEDEIARVLRQGTWLFD

Query:  KYLLVLSRPISMVKPTTMEFKFSTFWVHFCDL
        K L+VL +P S    + +EF    FW+H  DL
Subjt:  KYLLVLSRPISMVKPTTMEFKFSTFWVHFCDL

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]1.9e-0829.46Show/hide
Query:  LEDMMSKWENFNLTNDEESTAVRWIDRRR----------------------------WTFKSAWNIPNGLIVERLGTNLFLFTLRSEDEIARVLRQGTWL
        ++++   WENFNLTN+EE T +  +D ++                               K  W I     +E  G N+++   ++  E  RVL  G W 
Subjt:  LEDMMSKWENFNLTNDEESTAVRWIDRRR----------------------------WTFKSAWNIPNGLIVERLGTNLFLFTLRSEDEIARVLRQGTWL

Query:  FDKYLLVLSRPISMVKPTTMEFKFSTFWV
        FDK L VL  P +  KP  ++F+F  FWV
Subjt:  FDKYLLVLSRPISMVKPTTMEFKFSTFWV

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.3e-0928.68Show/hide
Query:  MALEDMMSKWENFNLTNDEESTAV---------------------RWIDR------RRWTFKSAWNIPNGLI-VERLGTNLFLFTLRSEDEIARVLRQGT
        MA  D++ +W+NF LT++EE TA+                      +I R       + T ++AW + N    V+ LG NLFLF+     +  ++ + G 
Subjt:  MALEDMMSKWENFNLTNDEESTAV---------------------RWIDR------RRWTFKSAWNIPNGLI-VERLGTNLFLFTLRSEDEIARVLRQGT

Query:  WLFDKYLLVLSRPISMVKPTTMEFKFSTFWVHFCDL
        W FD+ L+++++P++++ P+ ++F     WV F DL
Subjt:  WLFDKYLLVLSRPISMVKPTTMEFKFSTFWVHFCDL

TrEMBL top hitse value%identityAlignment
A0A2N9EEH0 Uncharacterized protein1.0e-0729.13Show/hide
Query:  LEDMMSKWENFNLTNDEE--------------STAVRWIDRRR-------WTFKSAWNIPNGLIVERLGTNLFLFTLRSEDEIARVLRQGTWLFDKYLLV
        +ED+  +WENF L+  E                 A +++ RR         TFK  W    G  +  +G N  LFT + E ++ RVL+ G W +D+ L+V
Subjt:  LEDMMSKWENFNLTNDEE--------------STAVRWIDRRR-------WTFKSAWNIPNGLIVERLGTNLFLFTLRSEDEIARVLRQGTWLFDKYLLV

Query:  LSRPISMVKPTTMEFKFSTFWVHFCDL
          R    +    + F    FWV   DL
Subjt:  LSRPISMVKPTTMEFKFSTFWVHFCDL

A0A2N9F3Z3 Uncharacterized protein1.0e-0729.13Show/hide
Query:  LEDMMSKWENFNLTNDEE--------------STAVRWIDRRR-------WTFKSAWNIPNGLIVERLGTNLFLFTLRSEDEIARVLRQGTWLFDKYLLV
        +ED+  +WENF L+  E                 A +++ RR         TFK  W    G  +  +G N  LFT + E ++ RVL+ G W +D+ L+V
Subjt:  LEDMMSKWENFNLTNDEE--------------STAVRWIDRRR-------WTFKSAWNIPNGLIVERLGTNLFLFTLRSEDEIARVLRQGTWLFDKYLLV

Query:  LSRPISMVKPTTMEFKFSTFWVHFCDL
          R    +    + F    FWV   DL
Subjt:  LSRPISMVKPTTMEFKFSTFWVHFCDL

A0A6J1BSZ1 uncharacterized protein LOC1110054818.8e-1230.15Show/hide
Query:  MALEDMMSKWENFNLTNDEESTAV--------------------RWIDRR-------RWTFKSAWNIP-NGLIVERLGTNLFLFTLRSEDEIARVLRQGT
        MA  +++ +W+NF LT++E+  AV                    + + +R       + T K AW +      V+ +G N+FLF      +  R+LR G 
Subjt:  MALEDMMSKWENFNLTNDEESTAV--------------------RWIDRR-------RWTFKSAWNIP-NGLIVERLGTNLFLFTLRSEDEIARVLRQGT

Query:  WLFDKYLLVLSRPISMVKPTTMEFKFSTFWVHFCDL
        W FD+ L+++  P+S+ KP  M+F+  + WVHF DL
Subjt:  WLFDKYLLVLSRPISMVKPTTMEFKFSTFWVHFCDL

A0A6J1DU55 uncharacterized protein LOC1110231356.9e-0929.55Show/hide
Query:  EDMMSKWENFNLTNDEESTA---------------------------VRWIDRRRWTFKSAWNIPNGLIVERLGTNLFLFTLRSEDEIARVLRQGTWLFD
        E++++ W+ F LT++E+  A                           +   D        AW + + L VE +G NLFLF    E ++ RV++ G W FD
Subjt:  EDMMSKWENFNLTNDEESTA---------------------------VRWIDRRRWTFKSAWNIPNGLIVERLGTNLFLFTLRSEDEIARVLRQGTWLFD

Query:  KYLLVLSRPISMVKPTTMEFKFSTFWVHFCDL
        K L+VL +P S    + +EF    FW+H  DL
Subjt:  KYLLVLSRPISMVKPTTMEFKFSTFWVHFCDL

A0A6J1DX30 uncharacterized protein LOC1110248746.3e-1028.68Show/hide
Query:  MALEDMMSKWENFNLTNDEESTAV---------------------RWIDR------RRWTFKSAWNIPNGLI-VERLGTNLFLFTLRSEDEIARVLRQGT
        MA  D++ +W+NF LT++EE TA+                      +I R       + T ++AW + N    V+ LG NLFLF+     +  ++ + G 
Subjt:  MALEDMMSKWENFNLTNDEESTAV---------------------RWIDR------RRWTFKSAWNIPNGLI-VERLGTNLFLFTLRSEDEIARVLRQGT

Query:  WLFDKYLLVLSRPISMVKPTTMEFKFSTFWVHFCDL
        W FD+ L+++++P++++ P+ ++F     WV F DL
Subjt:  WLFDKYLLVLSRPISMVKPTTMEFKFSTFWVHFCDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCTTGAAGATATGATGAGCAAGTGGGAGAACTTCAATCTCACCAATGATGAAGAGAGCACAGCCGTGAGGTGGATCGACAGGCGGCGATGGACCTTCAAATCCGC
ATGGAACATCCCTAATGGTCTTATTGTGGAAAGACTTGGGACCAACCTGTTTTTGTTCACTCTCCGTTCAGAGGATGAAATAGCACGGGTACTCCGGCAAGGGACGTGGT
TGTTCGATAAGTATCTACTTGTCCTGTCAAGACCAATTTCTATGGTGAAACCAACAACCATGGAGTTTAAATTCTCAACATTTTGGGTGCATTTCTGTGACCTTGACACG
CCCTACCCTAGATTATCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCTTGAAGATATGATGAGCAAGTGGGAGAACTTCAATCTCACCAATGATGAAGAGAGCACAGCCGTGAGGTGGATCGACAGGCGGCGATGGACCTTCAAATCCGC
ATGGAACATCCCTAATGGTCTTATTGTGGAAAGACTTGGGACCAACCTGTTTTTGTTCACTCTCCGTTCAGAGGATGAAATAGCACGGGTACTCCGGCAAGGGACGTGGT
TGTTCGATAAGTATCTACTTGTCCTGTCAAGACCAATTTCTATGGTGAAACCAACAACCATGGAGTTTAAATTCTCAACATTTTGGGTGCATTTCTGTGACCTTGACACG
CCCTACCCTAGATTATCCTAA
Protein sequenceShow/hide protein sequence
MALEDMMSKWENFNLTNDEESTAVRWIDRRRWTFKSAWNIPNGLIVERLGTNLFLFTLRSEDEIARVLRQGTWLFDKYLLVLSRPISMVKPTTMEFKFSTFWVHFCDLDT
PYPRLS