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Lag0035095 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035095
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr3:14778178..14778918
RNA-Seq ExpressionLag0035095
SyntenyLag0035095
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]2.1e-2540.97Show/hide
Query:  RPSDHPFDYVSFWIHVFELSLDWFNHIMAERIGSAIGVFEDVDNRNNFLFWGSSLRIRIKIDDLSRPLPRGIRIYPDGPLSALWVPFRYERLPEVCSFCG
        +P D  F  VS W+H F+LSL   N  MA R+G+AIG+FEDV++  N   WGS LR+R++  D+ +PL RGI++  DGP+   W+P +YERLP+    CG
Subjt:  RPSDHPFDYVSFWIHVFELSLDWFNHIMAERIGSAIGVFEDVDNRNNFLFWGSSLRIRIKIDDLSRPLPRGIRIYPDGPLSALWVPFRYERLPEVCSFCG

Query:  IIRHLSRGCT--LMNSEDREFGSPSQYGDWLRYTGRGMDPHVAS
         + H+ + C+   ++S  +      QYG WLR+ G     ++ S
Subjt:  IIRHLSRGCT--LMNSEDREFGSPSQYGDWLRYTGRGMDPHVAS

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.5e-2847.37Show/hide
Query:  SDHPFDYVSFWIHVFELSLDWFNHIMAERIGSAIGVFEDVDNRNNFLFWGSSLRIRIKIDDLSRPLPRGIRIYPDGPLSALWVPFRYERLPEVCSFCGII
        S+  F+ V+FWIH+F+L + W N  MA R+G+AIG F DVD       WG+SLRIR+ I D+++PL RGI+I  DGP+   W+P +YERLP+ C FCG+I
Subjt:  SDHPFDYVSFWIHVFELSLDWFNHIMAERIGSAIGVFEDVDNRNNFLFWGSSLRIRIKIDDLSRPLPRGIRIYPDGPLSALWVPFRYERLPEVCSFCGII

Query:  RHLSRGC--TLMNSEDREFGSPSQYGDWLRYTG
         H S  C    + ++D +  + S+YG WLR+ G
Subjt:  RHLSRGC--TLMNSEDREFGSPSQYGDWLRYTG

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]3.8e-1930.8Show/hide
Query:  PSDHPFDYVSFWIHVFELSLDWFNHIMAERIGSAIGVFEDVDNRNNFLFWGSSLRIRIKIDDLSRPLPRGIRIYPDGPLSALWVPFRYERLPEVCSFCGI
        PS+  F  +  W+  F+L L      MA R+G+A+G FE+ D  +    WGS+LR+R+ + D+S+PL RGI++  DGP+   W+P +YERLP+ C  CG+
Subjt:  PSDHPFDYVSFWIHVFELSLDWFNHIMAERIGSAIGVFEDVDNRNNFLFWGSSLRIRIKIDDLSRPLPRGIRIYPDGPLSALWVPFRYERLPEVCSFCGI

Query:  IRHLSRGCTLMNSEDREFGSPSQYGDWLRYTG-------------------RGMDPHVASDGVHGRGVVQVHPVSQRLPMAV------------GPSASQ
                    S  R+     QYG WLRY G                    G +   +S    G G   V       P+A+            G   SQ
Subjt:  IRHLSRGCTLMNSEDREFGSPSQYGDWLRYTG-------------------RGMDPHVASDGVHGRGVVQVHPVSQRLPMAV------------GPSASQ

Query:  EGPTPVVPRHAQRGIRISEPSGEN
        +G +PV+    ++ I + E S  N
Subjt:  EGPTPVVPRHAQRGIRISEPSGEN

XP_028071384.1 uncharacterized protein LOC114273772 [Camellia sinensis]8.5e-1933Show/hide
Query:  MRPSDHPFDYVSFWIHVFELSLDWFNHIMAERIGSAIGVFEDVDNRNNFLFWGSSLRIRIKIDDLSRPLPRGIRIYPDGPLSALWVPFRYERLPEVCSFC
        ++PSD    +V FW+HV  L L   N  + + +G+A+G F D+D  +  + WG ++ IR+ + D+ +PL RG+++     +  +WV F+YERLP  C FC
Subjt:  MRPSDHPFDYVSFWIHVFELSLDWFNHIMAERIGSAIGVFEDVDNRNNFLFWGSSLRIRIKIDDLSRPLPRGIRIYPDGPLSALWVPFRYERLPEVCSFC

Query:  GIIRHLSRGC-TLMNSEDREFGSPSQYGDWLRYTG-RGMDPHVASDGVHGRGVVQVHPVSQRLPMAVG-PSASQEGPTPV------VPRHAQRGIRISEP
        G + H  R C   ++S D       QYG WLR    +   P  A  G   +GV   HP  Q +P+       +QE   P+      VP  + R     E 
Subjt:  GIIRHLSRGC-TLMNSEDREFGSPSQYGDWLRYTG-RGMDPHVASDGVHGRGVVQVHPVSQRLPMAVG-PSASQEGPTPV------VPRHAQRGIRISEP

Query:  SGE
        SG+
Subjt:  SGE

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]6.5e-1933.82Show/hide
Query:  MRPSDHPFDYVSFWIHVFELSLDWFNHIMAERIGSAIGVFEDVDNRNNFLFWGSSLRIRIKIDDLSRPLPRGIRIYPDGPLSALWVPFRYERLPEVCSFC
        ++PSD     V FW+HV  L L   N  + E +G+A+G F D+D  +  + WG ++RIR+ + D+ +PL RG+++        +WV F+YERLP  C FC
Subjt:  MRPSDHPFDYVSFWIHVFELSLDWFNHIMAERIGSAIGVFEDVDNRNNFLFWGSSLRIRIKIDDLSRPLPRGIRIYPDGPLSALWVPFRYERLPEVCSFC

Query:  GIIRHLSRGC-TLMNSEDREFGSPSQYGDWLRYTGRGMDPHVASDGVH-----GRGVVQVHPVSQRLPMAVG-PSASQEGPTPV------VPRHAQRGIR
        G + H  R C   ++S D       QYG WLR     MD ++ S G        +GV   HP  Q +P+       +QE   P+      VP  + R   
Subjt:  GIIRHLSRGC-TLMNSEDREFGSPSQYGDWLRYTGRGMDPHVASDGVH-----GRGVVQVHPVSQRLPMAVG-PSASQEGPTPV------VPRHAQRGIR

Query:  ISEPSGE
          E SG+
Subjt:  ISEPSGE

TrEMBL top hitse value%identityAlignment
A0A2N9GWE9 Uncharacterized protein2.0e-1836.6Show/hide
Query:  FDYVSFWIHVFELSLDWFNHIMAERIGSAIGVFEDVDNRNNFLFWGSSLRIRIKIDDLSRPLPRGIRIYPDGPLSALWVPFRYERLPEVCSFCGIIRHLS
        F +  FW+  + + L +      E++GS  G  E+VD   + + WG+ LR+RI + D+++P+PRG R+     L  +WV F+YERLP +C  CG+I HL 
Subjt:  FDYVSFWIHVFELSLDWFNHIMAERIGSAIGVFEDVDNRNNFLFWGSSLRIRIKIDDLSRPLPRGIRIYPDGPLSALWVPFRYERLPEVCSFCGIIRHLS

Query:  RGCTLMNSEDREF-GSPSQYGDWLRYT-----GRGMD----PHVASDGVHGRG
        R C      +    G   QYG WLR +      RGMD      V S  V  RG
Subjt:  RGCTLMNSEDREF-GSPSQYGDWLRYT-----GRGMD----PHVASDGVHGRG

A0A2N9HMC6 Reverse transcriptase domain-containing protein1.2e-1838.93Show/hide
Query:  MRPSDHPFDYVSFWIHVFELSLDWFNHIMAERIGSAIGVFEDVDNRNNFLFWGSSLRIRIKIDDLSRPLPRGIRIYPDGPLSALWVPFRYERLPEVCSFC
        ++PS    + V FW+ + +L L + N  + E +G  +G    VD   N + WG SLR+R+++ D+S+PL RG +I   G   +LW+ F+YERLP  C  C
Subjt:  MRPSDHPFDYVSFWIHVFELSLDWFNHIMAERIGSAIGVFEDVDNRNNFLFWGSSLRIRIKIDDLSRPLPRGIRIYPDGPLSALWVPFRYERLPEVCSFC

Query:  GIIRHLSRGCTLMNSEDREFGSPSQYGDWLR
        G + H   GC +  S  R+F    QYG WLR
Subjt:  GIIRHLSRGCTLMNSEDREFGSPSQYGDWLR

A0A6J1BSZ1 uncharacterized protein LOC1110054811.0e-2540.97Show/hide
Query:  RPSDHPFDYVSFWIHVFELSLDWFNHIMAERIGSAIGVFEDVDNRNNFLFWGSSLRIRIKIDDLSRPLPRGIRIYPDGPLSALWVPFRYERLPEVCSFCG
        +P D  F  VS W+H F+LSL   N  MA R+G+AIG+FEDV++  N   WGS LR+R++  D+ +PL RGI++  DGP+   W+P +YERLP+    CG
Subjt:  RPSDHPFDYVSFWIHVFELSLDWFNHIMAERIGSAIGVFEDVDNRNNFLFWGSSLRIRIKIDDLSRPLPRGIRIYPDGPLSALWVPFRYERLPEVCSFCG

Query:  IIRHLSRGCT--LMNSEDREFGSPSQYGDWLRYTGRGMDPHVAS
         + H+ + C+   ++S  +      QYG WLR+ G     ++ S
Subjt:  IIRHLSRGCT--LMNSEDREFGSPSQYGDWLRYTGRGMDPHVAS

A0A6J1DU55 uncharacterized protein LOC1110231357.5e-2947.37Show/hide
Query:  SDHPFDYVSFWIHVFELSLDWFNHIMAERIGSAIGVFEDVDNRNNFLFWGSSLRIRIKIDDLSRPLPRGIRIYPDGPLSALWVPFRYERLPEVCSFCGII
        S+  F+ V+FWIH+F+L + W N  MA R+G+AIG F DVD       WG+SLRIR+ I D+++PL RGI+I  DGP+   W+P +YERLP+ C FCG+I
Subjt:  SDHPFDYVSFWIHVFELSLDWFNHIMAERIGSAIGVFEDVDNRNNFLFWGSSLRIRIKIDDLSRPLPRGIRIYPDGPLSALWVPFRYERLPEVCSFCGII

Query:  RHLSRGC--TLMNSEDREFGSPSQYGDWLRYTG
         H S  C    + ++D +  + S+YG WLR+ G
Subjt:  RHLSRGC--TLMNSEDREFGSPSQYGDWLRYTG

A0A6J1DX30 uncharacterized protein LOC1110248741.9e-1930.8Show/hide
Query:  PSDHPFDYVSFWIHVFELSLDWFNHIMAERIGSAIGVFEDVDNRNNFLFWGSSLRIRIKIDDLSRPLPRGIRIYPDGPLSALWVPFRYERLPEVCSFCGI
        PS+  F  +  W+  F+L L      MA R+G+A+G FE+ D  +    WGS+LR+R+ + D+S+PL RGI++  DGP+   W+P +YERLP+ C  CG+
Subjt:  PSDHPFDYVSFWIHVFELSLDWFNHIMAERIGSAIGVFEDVDNRNNFLFWGSSLRIRIKIDDLSRPLPRGIRIYPDGPLSALWVPFRYERLPEVCSFCGI

Query:  IRHLSRGCTLMNSEDREFGSPSQYGDWLRYTG-------------------RGMDPHVASDGVHGRGVVQVHPVSQRLPMAV------------GPSASQ
                    S  R+     QYG WLRY G                    G +   +S    G G   V       P+A+            G   SQ
Subjt:  IRHLSRGCTLMNSEDREFGSPSQYGDWLRYTG-------------------RGMDPHVASDGVHGRGVVQVHPVSQRLPMAV------------GPSASQ

Query:  EGPTPVVPRHAQRGIRISEPSGEN
        +G +PV+    ++ I + E S  N
Subjt:  EGPTPVVPRHAQRGIRISEPSGEN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCCTTCTGATCACCCGTTTGATTATGTATCCTTTTGGATTCATGTTTTCGAGTTGTCGTTGGATTGGTTTAACCATATAATGGCTGAACGTATCGGAAGCGCAAT
TGGAGTTTTTGAAGATGTTGACAATCGAAACAACTTCCTTTTCTGGGGATCGAGCTTACGCATTCGAATTAAAATTGATGATCTCAGTCGACCTCTCCCCCGTGGCATCA
GAATTTATCCGGATGGTCCCTTAAGTGCCTTATGGGTCCCTTTTCGTTATGAACGATTACCGGAGGTGTGTTCATTCTGCGGGATTATCAGGCATCTTTCTCGTGGCTGT
ACTCTTATGAACAGCGAGGATCGAGAATTTGGTTCTCCATCTCAGTATGGGGATTGGCTTCGTTACACTGGAAGAGGGATGGATCCGCATGTTGCTTCTGACGGTGTGCA
TGGAAGGGGTGTTGTTCAAGTCCATCCGGTGAGCCAACGGCTGCCTATGGCGGTGGGTCCATCGGCTTCGCAAGAGGGTCCGACTCCTGTGGTTCCAAGACATGCTCAAC
GTGGAATTCGTATATCTGAACCGAGCGGGGAGAACCAGCAGAGGGTCAATCCTCAAAAGCATATGTTAATTTACTCTTTGTCTAATGGACCTCAGATCTCGTCTAAAGGG
AAAGAGAAGATGCCATATTTACTATCTTCGCTTAGAGAAGAATTCCCTTCACTAGCGGCTAGTTGGAAGCAAGAATGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCCTTCTGATCACCCGTTTGATTATGTATCCTTTTGGATTCATGTTTTCGAGTTGTCGTTGGATTGGTTTAACCATATAATGGCTGAACGTATCGGAAGCGCAAT
TGGAGTTTTTGAAGATGTTGACAATCGAAACAACTTCCTTTTCTGGGGATCGAGCTTACGCATTCGAATTAAAATTGATGATCTCAGTCGACCTCTCCCCCGTGGCATCA
GAATTTATCCGGATGGTCCCTTAAGTGCCTTATGGGTCCCTTTTCGTTATGAACGATTACCGGAGGTGTGTTCATTCTGCGGGATTATCAGGCATCTTTCTCGTGGCTGT
ACTCTTATGAACAGCGAGGATCGAGAATTTGGTTCTCCATCTCAGTATGGGGATTGGCTTCGTTACACTGGAAGAGGGATGGATCCGCATGTTGCTTCTGACGGTGTGCA
TGGAAGGGGTGTTGTTCAAGTCCATCCGGTGAGCCAACGGCTGCCTATGGCGGTGGGTCCATCGGCTTCGCAAGAGGGTCCGACTCCTGTGGTTCCAAGACATGCTCAAC
GTGGAATTCGTATATCTGAACCGAGCGGGGAGAACCAGCAGAGGGTCAATCCTCAAAAGCATATGTTAATTTACTCTTTGTCTAATGGACCTCAGATCTCGTCTAAAGGG
AAAGAGAAGATGCCATATTTACTATCTTCGCTTAGAGAAGAATTCCCTTCACTAGCGGCTAGTTGGAAGCAAGAATGTTAA
Protein sequenceShow/hide protein sequence
MRPSDHPFDYVSFWIHVFELSLDWFNHIMAERIGSAIGVFEDVDNRNNFLFWGSSLRIRIKIDDLSRPLPRGIRIYPDGPLSALWVPFRYERLPEVCSFCGIIRHLSRGC
TLMNSEDREFGSPSQYGDWLRYTGRGMDPHVASDGVHGRGVVQVHPVSQRLPMAVGPSASQEGPTPVVPRHAQRGIRISEPSGENQQRVNPQKHMLIYSLSNGPQISSKG
KEKMPYLLSSLREEFPSLAASWKQEC