; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035111 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035111
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 2-like
Genome locationchr3:15051416..15052718
RNA-Seq ExpressionLag0035111
SyntenyLag0035111
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0032196 - transposition (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025876.1 uncharacterized protein E6C27_scaffold34G001550 [Cucumis melo var. makuwa]3.6e-3635.14Show/hide
Query:  LTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDVQGVDTNIHNGGGAVASLSRGEKNFE---FVNSDGIDALTDIASVIEGCVFSCKEHLK
        LTL+    +N   I + +D+DV W++         D  +V+D     T+I N     + L R E +      ++ +  ++   +  +  G +F  K  LK
Subjt:  LTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDVQGVDTNIHNGGGAVASLSRGEKNFE---FVNSDGIDALTDIASVIEGCVFSCKEHLK

Query:  KVVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQ--------------------------CYDNAWRGREKTLNELRGSPEVSYAQIPLFATKLIERNLG
        K +  LAL  SF+  T++SN   + + C D SC                            YD AW GRE  LN +RG+PE SYA +  F+  LI  N G
Subjt:  KVVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQ--------------------------CYDNAWRGREKTLNELRGSPEVSYAQIPLFATKLIERNLG

Query:  TYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVISVDGTSLKNKFSGTFLTVCTFDGSA
        TYTA+E D   RFKF+FM++AASI+ W +C+PVISVDG ++KNK+ GT ++ CT DG++
Subjt:  TYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVISVDGTSLKNKFSGTFLTVCTFDGSA

KAA0064137.1 MuDRA-like transposase [Cucumis melo var. makuwa]9.7e-3429.13Show/hide
Query:  PCDANLSQLKVCVANYLNLADSSSICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDVQGVDTNIHNGGGAVASLSRGEKNFE---FV
        P  ++  +   C+ + L      S+ RLTL+  + +N   I + +D+DV W++         D  +VVD     T+I N     + L R E +      +
Subjt:  PCDANLSQLKVCVANYLNLADSSSICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDVQGVDTNIHNGGGAVASLSRGEKNFE---FV

Query:  NSDGIDALTDIASVIEGCVFSCKEHLKKVVSSLALKGSFQFKTIKSNSIQYTVACIDDSC----------------------------------------
        + +  ++   +  +  G +F  K  LKK +  LAL  SF+  T++SN   + + C D +C                                        
Subjt:  NSDGIDALTDIASVIEGCVFSCKEHLKKVVSSLALKGSFQFKTIKSNSIQYTVACIDDSC----------------------------------------

Query:  --QC-------------------------------YDNAWRGREKTLNELRGSPEVSYAQIPLFATKLIERNLGTYTAQEVDSNDRFKFFFMSIAASING
          +C                               YD AWRGRE  LN +RG+PE SYA +  F+  LI  N GTYTA+E D    FKF+FM +AASI+ 
Subjt:  --QC-------------------------------YDNAWRGREKTLNELRGSPEVSYAQIPLFATKLIERNLGTYTAQEVDSNDRFKFFFMSIAASING

Query:  WKHCLPVISVDGTSLKNKFSGTFLTVCTFDGSA
        W +C+PVISVDG ++KNK+ GT ++ CT DG++
Subjt:  WKHCLPVISVDGTSLKNKFSGTFLTVCTFDGSA

KAA0067552.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]1.8e-3228.14Show/hide
Query:  MAGHQIMICVRGVWDVAGVYRGFKSDIETCPCDANLSQLKVCVANYLNLADSSSICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDV
        MA  ++     G W  +  Y  ++      P  ++  +   C+ + L      SIC LTL+    +N   I + +D+DV W++         D  +VVD 
Subjt:  MAGHQIMICVRGVWDVAGVYRGFKSDIETCPCDANLSQLKVCVANYLNLADSSSICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDV

Query:  QGVDTNIHNGGGAVASLSRGE----KNFEFVNSDGIDALTDIASVIEGCVFSCKEHLKKVVSSLALKGSFQFKTIKSNSIQYTVACIDDSC---------
            T+I N     + L R E    KN   ++ +  ++   +  +  G +F  K  LKK +  LAL  SF+  T++SN   + + C D SC         
Subjt:  QGVDTNIHNGGGAVASLSRGE----KNFEFVNSDGIDALTDIASVIEGCVFSCKEHLKKVVSSLALKGSFQFKTIKSNSIQYTVACIDDSC---------

Query:  -----------------------------------QC-------------------------------YDNAWRGREKTLNELRGSPEVSYAQIPLFATK
                                           +C                               YD AWRGRE  LN ++G+PE SYA +  F+  
Subjt:  -----------------------------------QC-------------------------------YDNAWRGREKTLNELRGSPEVSYAQIPLFATK

Query:  LIERNLGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVISVDGTSLKNKFSGTFLTVCTFDGSA
        LI  N GTYTA+E D   RFKF+FM++ ASI+ W + +PVISVDG ++KN + GT ++ CT DG++
Subjt:  LIERNLGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVISVDGTSLKNKFSGTFLTVCTFDGSA

TYK22587.1 uncharacterized protein E5676_scaffold195G00040 [Cucumis melo var. makuwa]5.5e-3735.52Show/hide
Query:  LTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDVQGVDTNIHNGGGAVASLSRGEKNFE---FVNSDGIDALTDIASVIEGCVFSCKEHLK
        LTL+    +N   I + +D+DV W++         D  +V+D     T+I N     + L R E +      ++ +  ++   +  +  G +F  K  LK
Subjt:  LTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDVQGVDTNIHNGGGAVASLSRGEKNFE---FVNSDGIDALTDIASVIEGCVFSCKEHLK

Query:  KVVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQ--------------------------CYDNAWRGREKTLNELRGSPEVSYAQIPLFATKLIERNLG
        K +  LAL  SF+  T++SN   + + C D SC                            YD AWRGRE  LN +RG+PE SYA +  F+  LI  N G
Subjt:  KVVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQ--------------------------CYDNAWRGREKTLNELRGSPEVSYAQIPLFATKLIERNLG

Query:  TYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVISVDGTSLKNKFSGTFLTVCTFDGSA
        TYTA+E D   RFKF+FM++AASI+ W +C+PVISVDG ++KNK+ GT ++ CT DG++
Subjt:  TYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVISVDGTSLKNKFSGTFLTVCTFDGSA

XP_038887125.1 uncharacterized protein LOC120077310 [Benincasa hispida]2.6e-3431.69Show/hide
Query:  MAGHQIMICVRGVWDVAGVYRGFKSDIETCPCDANLSQLKVCVANYLNLADSSSICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVD-
        M   ++ +   G WD    Y  F+      P +++  Q    +   L  +   +I RL ++   SSN   I + ED+ + W++    +    D C+VVD 
Subjt:  MAGHQIMICVRGVWDVAGVYRGFKSDIETCPCDANLSQLKVCVANYLNLADSSSICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVD-

Query:  VQGVDTNIHN-------GGGAVASLSRGEKNFEFVNSDGIDALTDIASVIEGCVFSCKEHLKKVVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQCYDN
        V  V  N  N             S      N E V+S   D       +  G  FS K  LKK +  LALK SF+  T +SN   + + C D SC  Y  
Subjt:  VQGVDTNIHN-------GGGAVASLSRGEKNFEFVNSDGIDALTDIASVIEGCVFSCKEHLKKVVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQCYDN

Query:  A--WRG------------------------REKT----LNELRGSPEVSYAQIPLFATKLIERNLGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVI
        A  +RG                        R+ T        +G+ E SY  +P F+T LIE N GTYT QE D   RFK++F+++AASI+ WK C P++
Subjt:  A--WRG------------------------REKT----LNELRGSPEVSYAQIPLFATKLIERNLGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVI

Query:  SVDGTSLKNKFSGTFLTVCTFDGSA
        SVDG  LKN F GT  + CT +G++
Subjt:  SVDGTSLKNKFSGTFLTVCTFDGSA

TrEMBL top hitse value%identityAlignment
A0A5A7SJA0 Uncharacterized protein1.7e-3635.14Show/hide
Query:  LTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDVQGVDTNIHNGGGAVASLSRGEKNFE---FVNSDGIDALTDIASVIEGCVFSCKEHLK
        LTL+    +N   I + +D+DV W++         D  +V+D     T+I N     + L R E +      ++ +  ++   +  +  G +F  K  LK
Subjt:  LTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDVQGVDTNIHNGGGAVASLSRGEKNFE---FVNSDGIDALTDIASVIEGCVFSCKEHLK

Query:  KVVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQ--------------------------CYDNAWRGREKTLNELRGSPEVSYAQIPLFATKLIERNLG
        K +  LAL  SF+  T++SN   + + C D SC                            YD AW GRE  LN +RG+PE SYA +  F+  LI  N G
Subjt:  KVVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQ--------------------------CYDNAWRGREKTLNELRGSPEVSYAQIPLFATKLIERNLG

Query:  TYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVISVDGTSLKNKFSGTFLTVCTFDGSA
        TYTA+E D   RFKF+FM++AASI+ W +C+PVISVDG ++KNK+ GT ++ CT DG++
Subjt:  TYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVISVDGTSLKNKFSGTFLTVCTFDGSA

A0A5A7VAU3 MuDRA-like transposase4.7e-3429.13Show/hide
Query:  PCDANLSQLKVCVANYLNLADSSSICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDVQGVDTNIHNGGGAVASLSRGEKNFE---FV
        P  ++  +   C+ + L      S+ RLTL+  + +N   I + +D+DV W++         D  +VVD     T+I N     + L R E +      +
Subjt:  PCDANLSQLKVCVANYLNLADSSSICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDVQGVDTNIHNGGGAVASLSRGEKNFE---FV

Query:  NSDGIDALTDIASVIEGCVFSCKEHLKKVVSSLALKGSFQFKTIKSNSIQYTVACIDDSC----------------------------------------
        + +  ++   +  +  G +F  K  LKK +  LAL  SF+  T++SN   + + C D +C                                        
Subjt:  NSDGIDALTDIASVIEGCVFSCKEHLKKVVSSLALKGSFQFKTIKSNSIQYTVACIDDSC----------------------------------------

Query:  --QC-------------------------------YDNAWRGREKTLNELRGSPEVSYAQIPLFATKLIERNLGTYTAQEVDSNDRFKFFFMSIAASING
          +C                               YD AWRGRE  LN +RG+PE SYA +  F+  LI  N GTYTA+E D    FKF+FM +AASI+ 
Subjt:  --QC-------------------------------YDNAWRGREKTLNELRGSPEVSYAQIPLFATKLIERNLGTYTAQEVDSNDRFKFFFMSIAASING

Query:  WKHCLPVISVDGTSLKNKFSGTFLTVCTFDGSA
        W +C+PVISVDG ++KNK+ GT ++ CT DG++
Subjt:  WKHCLPVISVDGTSLKNKFSGTFLTVCTFDGSA

A0A5A7VGR4 Protein FAR1-RELATED SEQUENCE 2-like8.9e-3328.14Show/hide
Query:  MAGHQIMICVRGVWDVAGVYRGFKSDIETCPCDANLSQLKVCVANYLNLADSSSICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDV
        MA  ++     G W  +  Y  ++      P  ++  +   C+ + L      SIC LTL+    +N   I + +D+DV W++         D  +VVD 
Subjt:  MAGHQIMICVRGVWDVAGVYRGFKSDIETCPCDANLSQLKVCVANYLNLADSSSICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDV

Query:  QGVDTNIHNGGGAVASLSRGE----KNFEFVNSDGIDALTDIASVIEGCVFSCKEHLKKVVSSLALKGSFQFKTIKSNSIQYTVACIDDSC---------
            T+I N     + L R E    KN   ++ +  ++   +  +  G +F  K  LKK +  LAL  SF+  T++SN   + + C D SC         
Subjt:  QGVDTNIHNGGGAVASLSRGE----KNFEFVNSDGIDALTDIASVIEGCVFSCKEHLKKVVSSLALKGSFQFKTIKSNSIQYTVACIDDSC---------

Query:  -----------------------------------QC-------------------------------YDNAWRGREKTLNELRGSPEVSYAQIPLFATK
                                           +C                               YD AWRGRE  LN ++G+PE SYA +  F+  
Subjt:  -----------------------------------QC-------------------------------YDNAWRGREKTLNELRGSPEVSYAQIPLFATK

Query:  LIERNLGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVISVDGTSLKNKFSGTFLTVCTFDGSA
        LI  N GTYTA+E D   RFKF+FM++ ASI+ W + +PVISVDG ++KN + GT ++ CT DG++
Subjt:  LIERNLGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVISVDGTSLKNKFSGTFLTVCTFDGSA

A0A5D3BH73 DBD_Tnp_Mut domain-containing protein2.6e-3237.9Show/hide
Query:  DCCLVVDVQGVDTNIHNGGGAVASLSRGEKNFE---FVNSDGIDALTDIASVIEGCVFSCKEHLKKVVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQ-
        D  +VVD     TNI N     + L R E +      ++ D  ++     S+  G +F     LKK +  LAL  SF+  T+ SN   + + C D SC  
Subjt:  DCCLVVDVQGVDTNIHNGGGAVASLSRGEKNFE---FVNSDGIDALTDIASVIEGCVFSCKEHLKKVVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQ-

Query:  --------------------CYDNAWRGREKTLNELRGSPEVSYAQIPLFATKLIERNLGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVISVDGTS
                             YD AWRGRE  LN +RG+ E SYA +  F  KLI  NLGTYTA+EVD   RFKF+F+++AAS + W +C+PVI VDG +
Subjt:  --------------------CYDNAWRGREKTLNELRGSPEVSYAQIPLFATKLIERNLGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVISVDGTS

Query:  LKNKFSGTFLTVCTFDGSA
        +KNK+ G  ++ CT D ++
Subjt:  LKNKFSGTFLTVCTFDGSA

A0A5D3DFW1 Uncharacterized protein2.7e-3735.52Show/hide
Query:  LTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDVQGVDTNIHNGGGAVASLSRGEKNFE---FVNSDGIDALTDIASVIEGCVFSCKEHLK
        LTL+    +N   I + +D+DV W++         D  +V+D     T+I N     + L R E +      ++ +  ++   +  +  G +F  K  LK
Subjt:  LTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDVQGVDTNIHNGGGAVASLSRGEKNFE---FVNSDGIDALTDIASVIEGCVFSCKEHLK

Query:  KVVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQ--------------------------CYDNAWRGREKTLNELRGSPEVSYAQIPLFATKLIERNLG
        K +  LAL  SF+  T++SN   + + C D SC                            YD AWRGRE  LN +RG+PE SYA +  F+  LI  N G
Subjt:  KVVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQ--------------------------CYDNAWRGREKTLNELRGSPEVSYAQIPLFATKLIERNLG

Query:  TYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVISVDGTSLKNKFSGTFLTVCTFDGSA
        TYTA+E D   RFKF+FM++AASI+ W +C+PVISVDG ++KNK+ GT ++ CT DG++
Subjt:  TYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVISVDGTSLKNKFSGTFLTVCTFDGSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGACATCAAATTATGATTTGTGTTCGGGGTGTTTGGGATGTGGCGGGAGTCTACAGAGGGTTCAAGTCCGACATTGAGACATGCCCATGTGATGCTAACCTCTC
CCAACTAAAGGTATGTGTTGCGAACTACCTCAATTTGGCGGACAGTAGTAGTATCTGCAGGTTGACACTCTTTAGGAATTGGTCAAGCAACCCGATAAATATAGTCCTCT
CAGAAGACAGGGATGTCTTTTGGATGGTAAACGGGTTTCAGAATGGCACGTATAGGGACTGTTGCTTAGTTGTCGACGTGCAGGGGGTAGATACTAATATACACAACGGG
GGAGGGGCAGTTGCAAGTTTATCCCGGGGGGAGAAAAATTTTGAGTTTGTCAACTCAGATGGGATTGATGCATTGACCGACATAGCATCCGTAATAGAGGGGTGCGTATT
TTCATGCAAAGAACATCTCAAGAAGGTAGTCTCTTCACTGGCTCTGAAAGGGAGTTTCCAATTCAAGACAATTAAATCCAATAGCATACAGTATACAGTGGCATGCATAG
ACGACTCATGCCAATGTTATGACAATGCATGGAGGGGTAGAGAAAAGACGTTAAATGAGTTGAGAGGATCTCCTGAAGTGTCTTATGCGCAAATTCCGTTGTTTGCTACC
AAGTTGATCGAAAGGAATTTAGGTACGTACACCGCCCAGGAAGTTGATTCAAATGACAGGTTCAAGTTCTTCTTCATGAGTATTGCAGCATCCATAAACGGGTGGAAACA
CTGTCTCCCAGTTATTTCGGTAGATGGTACATCTTTGAAGAATAAATTCAGTGGCACCTTTTTGACGGTCTGCACATTTGATGGGTCGGCGGGAGGAGGTCTACACGAAG
GCGATGGCTGGAGGTTGGATCGGCGGGAGGTGGGGGTCGGCGGTCTGTACGAAGAAGGACTGGCGTTTGTGGGAAGATGGAGGGTTTTGCTTGTCTTGAAGAGGGCTGTT
TGTGGGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGGACATCAAATTATGATTTGTGTTCGGGGTGTTTGGGATGTGGCGGGAGTCTACAGAGGGTTCAAGTCCGACATTGAGACATGCCCATGTGATGCTAACCTCTC
CCAACTAAAGGTATGTGTTGCGAACTACCTCAATTTGGCGGACAGTAGTAGTATCTGCAGGTTGACACTCTTTAGGAATTGGTCAAGCAACCCGATAAATATAGTCCTCT
CAGAAGACAGGGATGTCTTTTGGATGGTAAACGGGTTTCAGAATGGCACGTATAGGGACTGTTGCTTAGTTGTCGACGTGCAGGGGGTAGATACTAATATACACAACGGG
GGAGGGGCAGTTGCAAGTTTATCCCGGGGGGAGAAAAATTTTGAGTTTGTCAACTCAGATGGGATTGATGCATTGACCGACATAGCATCCGTAATAGAGGGGTGCGTATT
TTCATGCAAAGAACATCTCAAGAAGGTAGTCTCTTCACTGGCTCTGAAAGGGAGTTTCCAATTCAAGACAATTAAATCCAATAGCATACAGTATACAGTGGCATGCATAG
ACGACTCATGCCAATGTTATGACAATGCATGGAGGGGTAGAGAAAAGACGTTAAATGAGTTGAGAGGATCTCCTGAAGTGTCTTATGCGCAAATTCCGTTGTTTGCTACC
AAGTTGATCGAAAGGAATTTAGGTACGTACACCGCCCAGGAAGTTGATTCAAATGACAGGTTCAAGTTCTTCTTCATGAGTATTGCAGCATCCATAAACGGGTGGAAACA
CTGTCTCCCAGTTATTTCGGTAGATGGTACATCTTTGAAGAATAAATTCAGTGGCACCTTTTTGACGGTCTGCACATTTGATGGGTCGGCGGGAGGAGGTCTACACGAAG
GCGATGGCTGGAGGTTGGATCGGCGGGAGGTGGGGGTCGGCGGTCTGTACGAAGAAGGACTGGCGTTTGTGGGAAGATGGAGGGTTTTGCTTGTCTTGAAGAGGGCTGTT
TGTGGGAGATGA
Protein sequenceShow/hide protein sequence
MAGHQIMICVRGVWDVAGVYRGFKSDIETCPCDANLSQLKVCVANYLNLADSSSICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDVQGVDTNIHNG
GGAVASLSRGEKNFEFVNSDGIDALTDIASVIEGCVFSCKEHLKKVVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQCYDNAWRGREKTLNELRGSPEVSYAQIPLFAT
KLIERNLGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVISVDGTSLKNKFSGTFLTVCTFDGSAGGGLHEGDGWRLDRREVGVGGLYEEGLAFVGRWRVLLVLKRAV
CGR