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Lag0035120 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035120
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr3:15289574..15290091
RNA-Seq ExpressionLag0035120
SyntenyLag0035120
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAE1322405.1 unnamed protein product [Sepia pharaonis]4.0e-0533.86Show/hide
Query:  SGNDQPLIQAEFRMVSRPSHLVSDSDQSLIQAEFKMVSRPSHLVSSSDQPLIQAKFRMVSRPSHLASVE------FRMV--SRPSHLASGIDQPLIQAKF
        S +  P I         P+HL+S S    I         PSHL+SSS  P I  +      P+HL S+       FR+     PSHL S  D P I  + 
Subjt:  SGNDQPLIQAEFRMVSRPSHLVSDSDQSLIQAEFKMVSRPSHLVSSSDQPLIQAKFRMVSRPSHLASVE------FRMV--SRPSHLASGIDQPLIQAKF

Query:  RMVSRPSHLASGSDQPLIQAEFRMITC
             P+HL S SD P I   F  +TC
Subjt:  RMVSRPSHLASGSDQPLIQAEFRMITC
TrEMBL top hitse value%identityAlignment
A0A7S4AVG6 Hypothetical protein8.8e-0633.91Show/hide
Query:  SGNDQPLIQAEFRMVS--RPSHLVSDSDQSLIQAEFKMVS--RPSHLVSSSDQPLIQAKFRMVSRPSHLASVEFRMVSRPSHLASGIDQPLIQAKFRMVS
        SG D PL++ EF  VS   PSH  +     L++ EF  VS   PSH  +    PL++ +F  V+ P+            PS+   G   PL++ +F  VS
Subjt:  SGNDQPLIQAEFRMVS--RPSHLVSDSDQSLIQAEFKMVS--RPSHLVSSSDQPLIQAKFRMVSRPSHLASVEFRMVSRPSHLASGIDQPLIQAKFRMVS

Query:  --RPSHLASGSDQPL
           PSH  +G   PL
Subjt:  --RPSHLASGSDQPL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGTAGTTTCGTGCAGAGGTGGTCATTCTTTCACTTCTCTTGCCTCAGGCAATGATCAACCCCTGATTCAGGCGGAATTCAGGATGGTCTCTCGCCCTTCACATCT
TGTCTCAGACAGTGATCAATCCCTGATTCAGGCGGAATTCAAGATGGTATCTCGCCCTTCACATCTTGTCTCAAGCAGTGATCAACCCCTGATTCAGGCGAAATTCAGGA
TGGTCTCTCGCCCTTCTCATCTTGCCTCAGTGGAATTCAGGATGGTCTCTCGCCCTTCTCATCTTGCCTCAGGCATTGATCAACCCCTGATTCAGGCGAAATTCAGGATG
GTCTCTCGCCCTTCACATCTTGCCTCAGGCAGTGATCAACCCTTGATTCAGGCAGAATTCAGGATGATCACTTGCCCTTCACAATCTTGTCTCAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTGTAGTTTCGTGCAGAGGTGGTCATTCTTTCACTTCTCTTGCCTCAGGCAATGATCAACCCCTGATTCAGGCGGAATTCAGGATGGTCTCTCGCCCTTCACATCT
TGTCTCAGACAGTGATCAATCCCTGATTCAGGCGGAATTCAAGATGGTATCTCGCCCTTCACATCTTGTCTCAAGCAGTGATCAACCCCTGATTCAGGCGAAATTCAGGA
TGGTCTCTCGCCCTTCTCATCTTGCCTCAGTGGAATTCAGGATGGTCTCTCGCCCTTCTCATCTTGCCTCAGGCATTGATCAACCCCTGATTCAGGCGAAATTCAGGATG
GTCTCTCGCCCTTCACATCTTGCCTCAGGCAGTGATCAACCCTTGATTCAGGCAGAATTCAGGATGATCACTTGCCCTTCACAATCTTGTCTCAGGTAG
Protein sequenceShow/hide protein sequence
MTVVSCRGGHSFTSLASGNDQPLIQAEFRMVSRPSHLVSDSDQSLIQAEFKMVSRPSHLVSSSDQPLIQAKFRMVSRPSHLASVEFRMVSRPSHLASGIDQPLIQAKFRM
VSRPSHLASGSDQPLIQAEFRMITCPSQSCLR