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Lag0035130 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035130
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:15404028..15404351
RNA-Seq ExpressionLag0035130
SyntenyLag0035130
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]9.1e-1844.55Show/hide
Query:  MVEFRNAIHSCCLLDPGYVGPQFTWSNNHFNSDMIWERLDRFLINPEMQAKCSRLKVQHLPRLTSDHMPLLAEW---WEEIIRINEDRLSRPRRFEKAWT
        M  F++ +  C LLDPG+VG  FTW + H     IWERLDRFLIN  +      L+++HL  L SDH P+LAEW    E  +   + R  RP RFE+ W 
Subjt:  MVEFRNAIHSCCLLDPGYVGPQFTWSNNHFNSDMIWERLDRFLINPEMQAKCSRLKVQHLPRLTSDHMPLLAEW---WEEIIRINEDRLSRPRRFEKAWT

Query:  KYGECRDIVQ
         + EC++IV+
Subjt:  KYGECRDIVQ

XP_038971595.1 uncharacterized protein LOC120104467 [Phoenix dactylifera]1.2e-1443.81Show/hide
Query:  EFRNAIHSCCLLDPGYVGPQFTWSNNHFNSDMIWERLDRFLINPEMQAKCSRLKVQHLPRLTSDHMPLLAEWWEEIIRINEDRLSRPRRFEKAWTKYGEC
        EFR+ +    L+D GY GPQFTW NN   S  +WERLDR   +P+        +V HLPR+ SDH PLL      I      R   P RFEK W  Y + 
Subjt:  EFRNAIHSCCLLDPGYVGPQFTWSNNHFNSDMIWERLDRFLINPEMQAKCSRLKVQHLPRLTSDHMPLLAEWWEEIIRINEDRLSRPRRFEKAWTKYGEC

Query:  RDIVQ
         DIV+
Subjt:  RDIVQ

XP_038974091.1 uncharacterized protein LOC120105576 [Phoenix dactylifera]2.7e-1440.95Show/hide
Query:  EFRNAIHSCCLLDPGYVGPQFTWSNNHFNSDMIWERLDRFLINPEMQAKCSRLKVQHLPRLTSDHMPLLAEWWEEIIRINEDRLSRPRRFEKAWTKYGEC
        EFR+ +    L+D G+ GPQFTW NN   +  +WERLDR L +P+   +    +V HLPR+ SDH PLL      +   +      P RFEK W  Y + 
Subjt:  EFRNAIHSCCLLDPGYVGPQFTWSNNHFNSDMIWERLDRFLINPEMQAKCSRLKVQHLPRLTSDHMPLLAEWWEEIIRINEDRLSRPRRFEKAWTKYGEC

Query:  RDIVQ
         DIV+
Subjt:  RDIVQ

XP_038976453.1 uncharacterized protein LOC120107308 [Phoenix dactylifera]4.2e-1542.86Show/hide
Query:  EFRNAIHSCCLLDPGYVGPQFTWSNNHFNSDMIWERLDRFLINPEMQAKCSRLKVQHLPRLTSDHMPLLAEWWEEIIRINEDRLSRPRRFEKAWTKYGEC
        EFR+ +    L+D G+ GPQFTW NN   S  +WERLDR   +P+   + S  +V HLPR+ SDH PLL      I   +      P RFEK W  Y + 
Subjt:  EFRNAIHSCCLLDPGYVGPQFTWSNNHFNSDMIWERLDRFLINPEMQAKCSRLKVQHLPRLTSDHMPLLAEWWEEIIRINEDRLSRPRRFEKAWTKYGEC

Query:  RDIVQ
         DIV+
Subjt:  RDIVQ

XP_038984358.1 uncharacterized protein LOC120111388 [Phoenix dactylifera]4.2e-1543.81Show/hide
Query:  EFRNAIHSCCLLDPGYVGPQFTWSNNHFNSDMIWERLDRFLINPEMQAKCSRLKVQHLPRLTSDHMPLLAEWWEEIIRINEDRLSR-PRRFEKAWTKYGE
        EFR+ +    L+D G+ GPQFTW NN   S  +WERLDR L +P+   +    +V HLPR+ SDH PLL       + I+     R P RFEK W  Y +
Subjt:  EFRNAIHSCCLLDPGYVGPQFTWSNNHFNSDMIWERLDRFLINPEMQAKCSRLKVQHLPRLTSDHMPLLAEWWEEIIRINEDRLSR-PRRFEKAWTKYGE

Query:  CRDIV
          DIV
Subjt:  CRDIV

TrEMBL top hitse value%identityAlignment
A0A2N9EK24 CCHC-type domain-containing protein1.0e-1438.32Show/hide
Query:  MVEFRNAIHSCCLLDPGYVGPQFTWSNNHFNSDMIWERLDRFLINPEMQAKCSRLKVQHLPRLTSDHMPLLAEWWEEIIRINEDRLSRPRRFEKAWTKYG
        M  FR+A+  C L D G+ GP+FTW N     + + +RLDR L   E ++    ++V HL   +SDHM L       ++R N  +  RP RFE+ WTK+ 
Subjt:  MVEFRNAIHSCCLLDPGYVGPQFTWSNNHFNSDMIWERLDRFLINPEMQAKCSRLKVQHLPRLTSDHMPLLAEWWEEIIRINEDRLSRPRRFEKAWTKYG

Query:  ECRDIVQ
        EC  I++
Subjt:  ECRDIVQ

A0A2N9I0P4 Reverse transcriptase domain-containing protein4.6e-1542.59Show/hide
Query:  MVEFRNAIHSCCLLDPGYVGPQFTWSNNHFNSDMIWERLDRFLINPEMQAKCSRLKVQHLPRLTSDHMPLLAEWWEEIIRINEDRLS--RPRRFEKAWTK
        M +FR+AI SC  +D G+VG  FTW NN   S  IWERLDR L   E  +      + H+   TSDH PL    W  ++  N    S  RP RFE+ W  
Subjt:  MVEFRNAIHSCCLLDPGYVGPQFTWSNNHFNSDMIWERLDRFLINPEMQAKCSRLKVQHLPRLTSDHMPLLAEWWEEIIRINEDRLS--RPRRFEKAWTK

Query:  YGECRDIV
           CRD+V
Subjt:  YGECRDIV

A0A2N9IBL8 Reverse transcriptase domain-containing protein7.8e-1541.51Show/hide
Query:  MVEFRNAIHSCCLLDPGYVGPQFTWSNNHFNSDMIWERLDRFLINPEMQAKCSRLKVQHLPRLTSDHMPLLAEWWEEIIRINEDRLSRPRRFEKAWTKYG
        M EF+N +++C ++D G+ GP+FTWSN H  S +I ERLDR L NP+ +       V HL R+ SDH P L      I  +    L RP RFE  W  + 
Subjt:  MVEFRNAIHSCCLLDPGYVGPQFTWSNNHFNSDMIWERLDRFLINPEMQAKCSRLKVQHLPRLTSDHMPLLAEWWEEIIRINEDRLSRPRRFEKAWTKYG

Query:  ECRDIV
        +  +IV
Subjt:  ECRDIV

A0A2N9IMU2 Reverse transcriptase domain-containing protein4.6e-1542.59Show/hide
Query:  MVEFRNAIHSCCLLDPGYVGPQFTWSNNHFNSDMIWERLDRFLINPEMQAKCSRLKVQHLPRLTSDHMPLLAEWWEEIIRINEDRLS--RPRRFEKAWTK
        M +FR+AI SC  +D G+VG  FTW NN   S  IWERLDR L   E  +      + H+   TSDH PL    W  ++  N    S  RP RFE+ W  
Subjt:  MVEFRNAIHSCCLLDPGYVGPQFTWSNNHFNSDMIWERLDRFLINPEMQAKCSRLKVQHLPRLTSDHMPLLAEWWEEIIRINEDRLS--RPRRFEKAWTK

Query:  YGECRDIV
           CRD+V
Subjt:  YGECRDIV

A0A6J1DRA0 uncharacterized protein LOC1110224234.4e-1844.55Show/hide
Query:  MVEFRNAIHSCCLLDPGYVGPQFTWSNNHFNSDMIWERLDRFLINPEMQAKCSRLKVQHLPRLTSDHMPLLAEW---WEEIIRINEDRLSRPRRFEKAWT
        M  F++ +  C LLDPG+VG  FTW + H     IWERLDRFLIN  +      L+++HL  L SDH P+LAEW    E  +   + R  RP RFE+ W 
Subjt:  MVEFRNAIHSCCLLDPGYVGPQFTWSNNHFNSDMIWERLDRFLINPEMQAKCSRLKVQHLPRLTSDHMPLLAEW---WEEIIRINEDRLSRPRRFEKAWT

Query:  KYGECRDIVQ
         + EC++IV+
Subjt:  KYGECRDIVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAGTTCAGAAATGCTATTCATAGTTGTTGTCTGTTGGATCCTGGATATGTAGGGCCGCAGTTTACGTGGAGTAATAACCATTTCAATAGTGATATGATCTGGGA
AAGGCTTGATCGATTCTTAATAAATCCTGAGATGCAAGCTAAGTGTAGCAGGCTCAAAGTTCAGCACCTTCCTCGATTGACGTCTGATCACATGCCTCTTTTGGCTGAAT
GGTGGGAGGAGATTATAAGAATCAATGAGGATCGGTTAAGTCGACCCAGACGTTTTGAAAAGGCGTGGACGAAGTATGGTGAATGCAGGGACATAGTTCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAGTTCAGAAATGCTATTCATAGTTGTTGTCTGTTGGATCCTGGATATGTAGGGCCGCAGTTTACGTGGAGTAATAACCATTTCAATAGTGATATGATCTGGGA
AAGGCTTGATCGATTCTTAATAAATCCTGAGATGCAAGCTAAGTGTAGCAGGCTCAAAGTTCAGCACCTTCCTCGATTGACGTCTGATCACATGCCTCTTTTGGCTGAAT
GGTGGGAGGAGATTATAAGAATCAATGAGGATCGGTTAAGTCGACCCAGACGTTTTGAAAAGGCGTGGACGAAGTATGGTGAATGCAGGGACATAGTTCAGTAG
Protein sequenceShow/hide protein sequence
MVEFRNAIHSCCLLDPGYVGPQFTWSNNHFNSDMIWERLDRFLINPEMQAKCSRLKVQHLPRLTSDHMPLLAEWWEEIIRINEDRLSRPRRFEKAWTKYGECRDIVQ