; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035148 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035148
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPectin lyase-like superfamily protein
Genome locationchr3:15753750..15758252
RNA-Seq ExpressionLag0035148
SyntenyLag0035148
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR006626 - Parallel beta-helix repeat
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038201.1 polygalacturonase [Cucumis melo var. makuwa]7.3e-12789.43Show/hide
Query:  QSLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIG
        ++LSFR S+NIRIRGL+SRNSQLFHIVINGCKNVLVE VNV+AA +SPNTDGIHVE STHVTI+DS IQTGDDCISIGPGS+N+WIQRIRCGPGHGISIG
Subjt:  QSLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIG

Query:  SLAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKF
        SLAHNMNEPGVGNVTV  AIF GTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCP+N+NCPGQESGIKISNIIYKDI+GTSATPIAIKF
Subjt:  SLAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKF

Query:  DCSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDCF
        DCSSKNPCN I+LE+VRLTYQNEEAKSSCEYA+GKTLGLVQP  CF
Subjt:  DCSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDCF

XP_008443656.2 PREDICTED: polygalacturonase [Cucumis melo]7.3e-12789.43Show/hide
Query:  QSLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIG
        ++LSFR S+NIRIRGL+SRNSQLFHIVINGCKNVLVE VNV+AA +SPNTDGIHVE STHVTI+DS IQTGDDCISIGPGS+N+WIQRIRCGPGHGISIG
Subjt:  QSLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIG

Query:  SLAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKF
        SLAHNMNEPGVGNVTV  AIF GTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCP+N+NCPGQESGIKISNIIYKDI+GTSATPIAIKF
Subjt:  SLAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKF

Query:  DCSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDCF
        DCSSKNPCN I+LE+VRLTYQNEEAKSSCEYA+GKTLGLVQP  CF
Subjt:  DCSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDCF

XP_022960566.1 polygalacturonase-like [Cucurbita moschata]2.2e-12386.18Show/hide
Query:  SLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGS
        +L+FR+S+NIRIRG++S+NSQLFHI+I+GCKNVLVEGVN++A   SPNTDGIHVE STHVTIVDS+IQTGDDCISIGPGS NLWIQRIRCGPGHGISIGS
Subjt:  SLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGS

Query:  LAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFD
        LAHN NEPGV NVTV +AIFSGTQNGLRIKSWARPS+GFV+GVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDI+GTSATPIAIKFD
Subjt:  LAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFD

Query:  CSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDCFA
        CSS+NPCN I+LE++RLTYQNEEAKSSCE A GK LGLVQPN CF+
Subjt:  CSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDCFA

XP_022987940.1 polygalacturonase-like [Cucurbita maxima]2.2e-12385.77Show/hide
Query:  SLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGS
        +L+FR+S+NIRIRG++S+NSQLFHI+I+GCKNVL+EGVN++A   SPNTDGIH+E STHVTIV+S+IQTGDDCISIGPGS NLWIQRIRCGPGHGISIGS
Subjt:  SLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGS

Query:  LAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFD
        LAHN NEPGV NVTV +AIFSGTQNGLRIKSWARPS+GFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDI+GTSATPIAIKFD
Subjt:  LAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFD

Query:  CSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDCFA
        CSS+NPCN I+LE+VRLTYQNE AKSSCEYA GK LGLVQPN CF+
Subjt:  CSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDCFA

XP_023515405.1 polygalacturonase-like [Cucurbita pepo subsp. pepo]1.2e-12486.99Show/hide
Query:  SLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGS
        +L+FR+S+NIRIRG++S+NSQLFHI+I+GCKNVLVEGVN++A   SPNTDGIHVE STHVTIV+S+IQTGDDCISIGPGS NLWIQRIRCGPGHGISIGS
Subjt:  SLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGS

Query:  LAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFD
        LAHN NEPGV NVTV +AIFSGTQNGLRIKSWARPS+GFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDI+GTSATPIAIKFD
Subjt:  LAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFD

Query:  CSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDCFA
        CSS+NPCN I+LE+VRLTYQNEEAKSSCEYA GK LGLVQPN CF+
Subjt:  CSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDCFA

TrEMBL top hitse value%identityAlignment
A0A1S3B8I8 polygalacturonase3.5e-12789.43Show/hide
Query:  QSLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIG
        ++LSFR S+NIRIRGL+SRNSQLFHIVINGCKNVLVE VNV+AA +SPNTDGIHVE STHVTI+DS IQTGDDCISIGPGS+N+WIQRIRCGPGHGISIG
Subjt:  QSLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIG

Query:  SLAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKF
        SLAHNMNEPGVGNVTV  AIF GTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCP+N+NCPGQESGIKISNIIYKDI+GTSATPIAIKF
Subjt:  SLAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKF

Query:  DCSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDCF
        DCSSKNPCN I+LE+VRLTYQNEEAKSSCEYA+GKTLGLVQP  CF
Subjt:  DCSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDCF

A0A5A7T989 Polygalacturonase3.5e-12789.43Show/hide
Query:  QSLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIG
        ++LSFR S+NIRIRGL+SRNSQLFHIVINGCKNVLVE VNV+AA +SPNTDGIHVE STHVTI+DS IQTGDDCISIGPGS+N+WIQRIRCGPGHGISIG
Subjt:  QSLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIG

Query:  SLAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKF
        SLAHNMNEPGVGNVTV  AIF GTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCP+N+NCPGQESGIKISNIIYKDI+GTSATPIAIKF
Subjt:  SLAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKF

Query:  DCSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDCF
        DCSSKNPCN I+LE+VRLTYQNEEAKSSCEYA+GKTLGLVQP  CF
Subjt:  DCSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDCF

A0A6J1D9I8 polygalacturonase-like1.8e-12385.77Show/hide
Query:  SLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGS
        +LSFR+S NIRI+GLVSRNSQLFHI+I+GC+NVL+EGVN+IA G+SPNTDGIHVE S+HVTI+ S IQTGDDCISIGPGS NLWIQ IRCGPGHGISIGS
Subjt:  SLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGS

Query:  LAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFD
        LAH+MNE GVGNVTV DAIFSGT+NGLRIK+WARPS+GFVYGVQFLGATMHNVQNPI+IDQHYCPHN++CPGQESGIKISN+IYKDIIGTSATPIAIKFD
Subjt:  LAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFD

Query:  CSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDCFA
        CSSKNPCN I+LENVRLTYQNEEAKSSCEY +GKTLGLV P+DCF+
Subjt:  CSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDCFA

A0A6J1H7Y9 polygalacturonase-like1.1e-12386.18Show/hide
Query:  SLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGS
        +L+FR+S+NIRIRG++S+NSQLFHI+I+GCKNVLVEGVN++A   SPNTDGIHVE STHVTIVDS+IQTGDDCISIGPGS NLWIQRIRCGPGHGISIGS
Subjt:  SLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGS

Query:  LAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFD
        LAHN NEPGV NVTV +AIFSGTQNGLRIKSWARPS+GFV+GVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDI+GTSATPIAIKFD
Subjt:  LAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFD

Query:  CSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDCFA
        CSS+NPCN I+LE++RLTYQNEEAKSSCE A GK LGLVQPN CF+
Subjt:  CSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDCFA

A0A6J1JI71 polygalacturonase-like1.1e-12385.77Show/hide
Query:  SLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGS
        +L+FR+S+NIRIRG++S+NSQLFHI+I+GCKNVL+EGVN++A   SPNTDGIH+E STHVTIV+S+IQTGDDCISIGPGS NLWIQRIRCGPGHGISIGS
Subjt:  SLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGS

Query:  LAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFD
        LAHN NEPGV NVTV +AIFSGTQNGLRIKSWARPS+GFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDI+GTSATPIAIKFD
Subjt:  LAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFD

Query:  CSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDCFA
        CSS+NPCN I+LE+VRLTYQNE AKSSCEYA GK LGLVQPN CF+
Subjt:  CSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDCFA

SwissProt top hitse value%identityAlignment
O22818 Probable polygalacturonase At2g438604.0e-6753.47Show/hide
Query:  QSLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIG
        +SL F  S+NI+I GL S NSQ FHIVI+   NV ++GV V A  +SPNTDGIHVE S  V I +S I TGDDCISIGPGS N++IQ IRCGPGHGISIG
Subjt:  QSLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIG

Query:  SLAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKF
        SL     E GV NVTV +  F GT NG+RIK+W + S  F   + F    M  V+NPI+IDQHYC H   CP QESG+K+SN+ Y+DI GTS T +A+  
Subjt:  SLAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKF

Query:  DCSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDC
        DCS + PC  I +++V L   +  A++SC+ A G    +V    C
Subjt:  DCSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDC

P48979 Polygalacturonase1.4e-8862.7Show/hide
Query:  SLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGS
        +L F  S+NI + GL S NSQ+FHIVIN  +NV ++GV V  +G+SPNTDGIHV++S+ VTI++S I TGDDC+SIGPG+ NLWI+ + CGPGHGISIGS
Subjt:  SLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGS

Query:  LAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFD
        L     E GV NVTV    FSGTQNGLRIKSW RPSTGF   + F  ATM NV+NPI+IDQHYCP N  CPGQ SG++IS++ Y+DI GTSAT +A+KFD
Subjt:  LAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFD

Query:  CSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDC
        CS K+PC +IKLE+V+LTY+N+ A+SSC +A G T G+VQP  C
Subjt:  CSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDC

Q39766 Polygalacturonase2.2e-5444.49Show/hide
Query:  SLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGS
        ++ F   +N  I+ + S++S+LFHI +  CKN+ +E + + A  +SPNTDGIH+  S  V I+ S I+TGDDCISIG G+ N+ I+ I CGPGHGISIGS
Subjt:  SLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGS

Query:  LAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFD
        L    NE  V  + + +   + T NG RIK+W     G V  + F   TM+NV +PILIDQ YCP N     +ES +K+SNI +K+I GTSA P AIKF 
Subjt:  LAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFD

Query:  CSSKNPCNDIKLENVRLTYQN-EEAKSSCEYARGKTLGLVQPNDC
        CS  +PC +++L ++ + +   E A S C   +  T+G + P  C
Subjt:  CSSKNPCNDIKLENVRLTYQN-EEAKSSCEYARGKTLGLVQPNDC

Q39786 Polygalacturonase6.5e-5444.49Show/hide
Query:  SLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGS
        ++ F   +N  I+ + S++S+LFHI +  CKN+ +E + + A  +SPNTDGIH+  S  V I+ S I+TGDDCISIG G+ N+ I+ I CGPGHGISIGS
Subjt:  SLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGS

Query:  LAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFD
        L    NE  V  + + +   + T NG RIK+W     G V  + F   TM+NV +PILIDQ YCP N     +ES +K+SNI +K+I GTSA P AIKF 
Subjt:  LAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFD

Query:  CSSKNPCNDIKLENVRLTYQN-EEAKSSCEYARGKTLGLVQPNDC
        CS  +PC +++L ++ + +   E A S C   +  T G + P  C
Subjt:  CSSKNPCNDIKLENVRLTYQN-EEAKSSCEYARGKTLGLVQPNDC

Q9SFB7 Polygalacturonase QRT21.9e-5344.03Show/hide
Query:  SLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGS
        +++F   +N+R+  +   N+Q  H+    CKNV    + V +  DSPNTDGIHV  + ++ I DS+++TGDDCISI  GS N+    I CGPGHGISIGS
Subjt:  SLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGS

Query:  LAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFD
        L  + +E  V NV V  A   GT NG+RIK+W +   G    + F    M NV NPI+I+Q YC     CP Q+S +++SN++YK+I GTS+ PIA+KF 
Subjt:  LAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFD

Query:  CSSKNPCNDIKLENVRLTYQNEE--AKSSCEYARGKTLGLVQP
        CS   PC  I ++NV+L  Q ++  +K+SC   +  T G V P
Subjt:  CSSKNPCNDIKLENVRLTYQNEE--AKSSCEYARGKTLGLVQP

Arabidopsis top hitse value%identityAlignment
AT1G05650.1 Pectin lyase-like superfamily protein1.1e-7754.25Show/hide
Query:  MQSLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISI
        ++S+SF S+ ++ I G+ S NSQ+ H+ +NGC NV V  + ++A GDSPNTDG  V+ ST VT+  S +QTGDDC++IG G+ N  I ++ CGPGHG+SI
Subjt:  MQSLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISI

Query:  GSLAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIK
        GSLA  +NE GV NVTV  ++F+G+QNG+RIKSWARPSTGFV  V F    M NVQNPI+IDQ+YCP N  CP + SG+KI+ + YK+I GTSAT  A+K
Subjt:  GSLAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIK

Query:  FDCSSKNPCNDIKLENVRLTY-QNEEAKSSCEYARGKTLGLVQPNDC
          CS  NPC  I L++++LTY +   A S C  A GK LG++QP  C
Subjt:  FDCSSKNPCNDIKLENVRLTY-QNEEAKSSCEYARGKTLGLVQPNDC

AT1G05660.1 Pectin lyase-like superfamily protein2.1e-7653.85Show/hide
Query:  MQSLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISI
        ++S+SF S+ ++ I G+ S NSQ+ H+ +NGC NV+V  V ++A G+SPNTDG HV+ ST VT   S +QTGDDC++IGPG+ NL I ++ CGPGHG+SI
Subjt:  MQSLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISI

Query:  GSLAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIK
        GSLA  + E GV NVTV  ++F+G+QNG+RIKSWARPS GFV  V F    M NV+NPI+IDQ+YCP +  CP + SG+KIS + YK+I GTSAT  A+K
Subjt:  GSLAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIK

Query:  FDCSSKNPCNDIKLENVRLTY-QNEEAKSSCEYARGKTLGLVQPNDC
          CS  +PC  I L++++LTY +   A S C  A GK+LG++QP  C
Subjt:  FDCSSKNPCNDIKLENVRLTY-QNEEAKSSCEYARGKTLGLVQPNDC

AT1G65570.1 Pectin lyase-like superfamily protein5.8e-8259.02Show/hide
Query:  SLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGS
        +L F  S+N++I+G++S NSQLFHI IN C+N+ +E V +IA  +SPNTDGIH++LST + + ++ I+TGDDCISIGPG+ NL +  I CGPGHGISIGS
Subjt:  SLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGS

Query:  LAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFD
        LA ++ E GV NVTV +A+F  T NGLRIKSW R S GFV  V+FLGA M NV  PILIDQ+YCP + +CP QESGIKI+++IY  I+GTSAT IAIK D
Subjt:  LAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFD

Query:  CSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDC
        CS K PC  I+++ + LT   E AK+SC    GK LGLV P+ C
Subjt:  CSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDC

AT2G43870.1 Pectin lyase-like superfamily protein1.1e-8358.68Show/hide
Query:  SLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGS
        ++ F+SSSN+ + GL S NSQ+FH+VINGC NV ++GV V+AAG+SPNTDGIHV+ S+ V+I ++ I TGDDC+SIGPG++ LWI+ + CGPGHGISIGS
Subjt:  SLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGS

Query:  LAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFD
        L  +  E GV NVTV    F+GT NG+RIKSWARPS+GF   ++F    M+NV+NPI+IDQ+YCP + +CP Q SGIKIS++++ DI GTSAT + +K D
Subjt:  LAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFD

Query:  CSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPN
        CSSK PC  I+LE+V+LTYQN+ A S+C +A G   G  QPN
Subjt:  CSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPN

AT3G59850.1 Pectin lyase-like superfamily protein2.1e-8457.79Show/hide
Query:  SLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGS
        S+ F+SS N+ I GL S NSQ+FH+ INGC NV ++GV V A G+SPNTDGIHV+ S+ V+I++S I TGDDC+SIGPG++ LWI+ + CGPGHGISIGS
Subjt:  SLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGS

Query:  LAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFD
        L     E GV N+TV  A F+GT+NG+RIKSWARPS GF   ++F    M+NVQNPI+IDQ+YCP N NCP Q SGIKIS++++ DI GTSAT + +K D
Subjt:  LAHNMNEPGVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFD

Query:  CSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDC
        CSSK PC  I++++V+LTY+N+ A + C +A G   G  +PN C
Subjt:  CSSKNPCNDIKLENVRLTYQNEEAKSSCEYARGKTLGLVQPNDC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCGCTAAGTTTTAGAAGCTCAAGCAATATAAGGATCAGAGGATTGGTTTCGAGAAACAGCCAATTGTTCCATATAGTGATCAATGGATGTAAGAATGTATTAGT
GGAAGGAGTGAATGTTATCGCTGCAGGCGATAGTCCTAACACAGATGGAATTCACGTGGAATTGTCCACGCACGTGACCATTGTTGACTCCGTCATCCAAACGGGAGATG
ATTGCATTTCCATTGGCCCTGGATCTCATAACCTTTGGATTCAACGCATTCGATGTGGACCTGGTCATGGTATTAGCATAGGAAGCTTAGCACACAATATGAACGAGCCA
GGGGTAGGAAACGTCACCGTTTTGGATGCAATTTTCTCAGGCACTCAGAATGGGCTGAGAATAAAATCATGGGCCAGGCCCAGCACTGGATTTGTCTACGGAGTCCAATT
CCTTGGCGCCACCATGCATAATGTCCAAAACCCAATTCTCATTGACCAACACTACTGCCCGCACAACCTAAACTGCCCCGGTCAGGAATCGGGTATCAAGATAAGCAATA
TAATATATAAAGACATTATAGGAACTTCAGCAACACCAATTGCTATAAAATTTGATTGCAGTTCAAAGAACCCTTGCAATGACATAAAGCTTGAGAATGTTCGCTTGACT
TACCAAAATGAAGAAGCTAAATCCTCATGTGAATATGCTAGGGGAAAAACATTGGGTTTAGTTCAACCAAATGATTGTTTCGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCGCTAAGTTTTAGAAGCTCAAGCAATATAAGGATCAGAGGATTGGTTTCGAGAAACAGCCAATTGTTCCATATAGTGATCAATGGATGTAAGAATGTATTAGT
GGAAGGAGTGAATGTTATCGCTGCAGGCGATAGTCCTAACACAGATGGAATTCACGTGGAATTGTCCACGCACGTGACCATTGTTGACTCCGTCATCCAAACGGGAGATG
ATTGCATTTCCATTGGCCCTGGATCTCATAACCTTTGGATTCAACGCATTCGATGTGGACCTGGTCATGGTATTAGCATAGGAAGCTTAGCACACAATATGAACGAGCCA
GGGGTAGGAAACGTCACCGTTTTGGATGCAATTTTCTCAGGCACTCAGAATGGGCTGAGAATAAAATCATGGGCCAGGCCCAGCACTGGATTTGTCTACGGAGTCCAATT
CCTTGGCGCCACCATGCATAATGTCCAAAACCCAATTCTCATTGACCAACACTACTGCCCGCACAACCTAAACTGCCCCGGTCAGGAATCGGGTATCAAGATAAGCAATA
TAATATATAAAGACATTATAGGAACTTCAGCAACACCAATTGCTATAAAATTTGATTGCAGTTCAAAGAACCCTTGCAATGACATAAAGCTTGAGAATGTTCGCTTGACT
TACCAAAATGAAGAAGCTAAATCCTCATGTGAATATGCTAGGGGAAAAACATTGGGTTTAGTTCAACCAAATGATTGTTTCGCTTAA
Protein sequenceShow/hide protein sequence
MQSLSFRSSSNIRIRGLVSRNSQLFHIVINGCKNVLVEGVNVIAAGDSPNTDGIHVELSTHVTIVDSVIQTGDDCISIGPGSHNLWIQRIRCGPGHGISIGSLAHNMNEP
GVGNVTVLDAIFSGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPHNLNCPGQESGIKISNIIYKDIIGTSATPIAIKFDCSSKNPCNDIKLENVRLT
YQNEEAKSSCEYARGKTLGLVQPNDCFA