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Lag0035151 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035151
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr3:15771068..15771596
RNA-Seq ExpressionLag0035151
SyntenyLag0035151
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]4.3e-0836.27Show/hide
Query:  FVNDLARAKYQEVLKRDFLFERGFGSDLSRFLESGIVNLG-----------WRQFCAKPEPVNSNIVREFYANLDVKDVFEVIVRGVPVQWSPEAINNLF
        FV++ A+  YQ +  R   FE GF      F E+   NLG           W++F   P PVN+ IV+EFY+N+   +   V+VRG+ ++++P AIN  F
Subjt:  FVNDLARAKYQEVLKRDFLFERGFGSDLSRFLESGIVNLG-----------WRQFCAKPEPVNSNIVREFYANLDVKDVFEVIVRGVPVQWSPEAINNLF

Query:  NL
         L
Subjt:  NL

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]5.6e-0840Show/hide
Query:  IRFVNDLARAKYQ-EVLKRDFLFERGFGSDLSR------FLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKDVFEVIVRGVPVQWSPEAINNLFNL
        ++F  + A  +Y+  +  R    E+GF  D S       F+   I    W+QFCA PE     +VREFYANL       V VRGV V WS EAIN +F L
Subjt:  IRFVNDLARAKYQ-EVLKRDFLFERGFGSDLSR------FLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKDVFEVIVRGVPVQWSPEAINNLFNL

PON42276.1 hypothetical protein PanWU01x14_283280 [Parasponia andersonii]4.3e-0838Show/hide
Query:  IRFVNDLARAKYQE-VLKRDFLFERGFGSDLSR------FLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKDVFEVIVRGVPVQWSPEAINNLFNL
        ++  ++ A  +Y+E +  R    E+GF  D S+      F+E  I    W+ FCA PE + + +VREFYAN+   D   V VRGV V  S EAIN ++ L
Subjt:  IRFVNDLARAKYQE-VLKRDFLFERGFGSDLSR------FLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKDVFEVIVRGVPVQWSPEAINNLFNL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.9e-0840Show/hide
Query:  IRFVNDLARAKYQ-EVLKRDFLFERGFGSDLSR------FLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKDVFEVIVRGVPVQWSPEAINNLFNL
        ++F  + A  +Y+  +  R    E+GF  D S       F+   I    W+QFCA PE     +VREFYANL   +   V VRGV V WS EAIN +F L
Subjt:  IRFVNDLARAKYQ-EVLKRDFLFERGFGSDLSR------FLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKDVFEVIVRGVPVQWSPEAINNLFNL

PON85987.1 hypothetical protein TorRG33x02_181920, partial [Trema orientale]4.3e-0840Show/hide
Query:  IRFVNDLARAKYQE-VLKRDFLFERGFGSDLSR------FLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKDVFEVIVRGVPVQWSPEAINNLFNL
        ++F  + A  +Y+E + K+    E+GF  + S       F+   I    WRQFCA PE     +VREFYANL   +   V VRGV V W+ EAIN +F L
Subjt:  IRFVNDLARAKYQE-VLKRDFLFERGFGSDLSR------FLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKDVFEVIVRGVPVQWSPEAINNLFNL

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.7e-0840Show/hide
Query:  IRFVNDLARAKYQ-EVLKRDFLFERGFGSDLSR------FLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKDVFEVIVRGVPVQWSPEAINNLFNL
        ++F  + A  +Y+  +  R    E+GF  D S       F+   I    W+QFCA PE     +VREFYANL       V VRGV V WS EAIN +F L
Subjt:  IRFVNDLARAKYQ-EVLKRDFLFERGFGSDLSR------FLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKDVFEVIVRGVPVQWSPEAINNLFNL

A0A2P5B0K0 Uncharacterized protein2.1e-0838Show/hide
Query:  IRFVNDLARAKYQE-VLKRDFLFERGFGSDLSR------FLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKDVFEVIVRGVPVQWSPEAINNLFNL
        ++  ++ A  +Y+E +  R    E+GF  D S+      F+E  I    W+ FCA PE + + +VREFYAN+   D   V VRGV V  S EAIN ++ L
Subjt:  IRFVNDLARAKYQE-VLKRDFLFERGFGSDLSR------FLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKDVFEVIVRGVPVQWSPEAINNLFNL

A0A2P5BCG4 Uncharacterized protein (Fragment)9.3e-0940Show/hide
Query:  IRFVNDLARAKYQ-EVLKRDFLFERGFGSDLSR------FLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKDVFEVIVRGVPVQWSPEAINNLFNL
        ++F  + A  +Y+  +  R    E+GF  D S       F+   I    W+QFCA PE     +VREFYANL   +   V VRGV V WS EAIN +F L
Subjt:  IRFVNDLARAKYQ-EVLKRDFLFERGFGSDLSR------FLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKDVFEVIVRGVPVQWSPEAINNLFNL

A0A2P5EK98 Uncharacterized protein (Fragment)2.1e-0840Show/hide
Query:  IRFVNDLARAKYQE-VLKRDFLFERGFGSDLSR------FLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKDVFEVIVRGVPVQWSPEAINNLFNL
        ++F  + A  +Y+E + K+    E+GF  + S       F+   I    WRQFCA PE     +VREFYANL   +   V VRGV V W+ EAIN +F L
Subjt:  IRFVNDLARAKYQE-VLKRDFLFERGFGSDLSR------FLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKDVFEVIVRGVPVQWSPEAINNLFNL

A0A6A2ZUE4 Uncharacterized protein2.1e-0836.27Show/hide
Query:  FVNDLARAKYQEVLKRDFLFERGFGSDLSRFLESGIVNLG-----------WRQFCAKPEPVNSNIVREFYANLDVKDVFEVIVRGVPVQWSPEAINNLF
        FV++ A+  YQ +  R   FE GF      F E+   NLG           W++F   P PVN+ IV+EFY+N+   +   V+VRG+ ++++P AIN  F
Subjt:  FVNDLARAKYQEVLKRDFLFERGFGSDLSRFLESGIVNLG-----------WRQFCAKPEPVNSNIVREFYANLDVKDVFEVIVRGVPVQWSPEAINNLF

Query:  NL
         L
Subjt:  NL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGCTATCAGCCGTATTCAGAGAGAGAGGAACAAGAGAAGAAGGAAGCTGAAGAGAAGACGAGAGAAGAAGAAGCAAAAAAGGGCTGAGGAAGAGATTCTGTCCAA
GCGAAGAGAAGACAAGGGCAAAGGAATTGTTGAGGCATCGGGTGAGACTGGCGAGATTGAGGAACCAAGGTTGCCTTTTATTCGCTTCGTCAACGACCTTGCTCGAGCAA
AATACCAAGAGGTGCTGAAACGTGACTTCTTGTTCGAACGAGGATTTGGCAGTGATTTGTCCAGGTTCTTAGAGTCTGGAATAGTGAACCTTGGGTGGAGGCAGTTTTGT
GCGAAACCAGAACCTGTCAATTCCAACATTGTTCGGGAATTTTACGCTAATCTTGACGTTAAGGATGTCTTTGAGGTTATAGTTCGAGGAGTGCCTGTACAGTGGAGCCC
AGAAGCCATTAATAATTTATTTAATCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCGCTATCAGCCGTATTCAGAGAGAGAGGAACAAGAGAAGAAGGAAGCTGAAGAGAAGACGAGAGAAGAAGAAGCAAAAAAGGGCTGAGGAAGAGATTCTGTCCAA
GCGAAGAGAAGACAAGGGCAAAGGAATTGTTGAGGCATCGGGTGAGACTGGCGAGATTGAGGAACCAAGGTTGCCTTTTATTCGCTTCGTCAACGACCTTGCTCGAGCAA
AATACCAAGAGGTGCTGAAACGTGACTTCTTGTTCGAACGAGGATTTGGCAGTGATTTGTCCAGGTTCTTAGAGTCTGGAATAGTGAACCTTGGGTGGAGGCAGTTTTGT
GCGAAACCAGAACCTGTCAATTCCAACATTGTTCGGGAATTTTACGCTAATCTTGACGTTAAGGATGTCTTTGAGGTTATAGTTCGAGGAGTGCCTGTACAGTGGAGCCC
AGAAGCCATTAATAATTTATTTAATCTCTAG
Protein sequenceShow/hide protein sequence
MIAISRIQRERNKRRRKLKRRREKKKQKRAEEEILSKRREDKGKGIVEASGETGEIEEPRLPFIRFVNDLARAKYQEVLKRDFLFERGFGSDLSRFLESGIVNLGWRQFC
AKPEPVNSNIVREFYANLDVKDVFEVIVRGVPVQWSPEAINNLFNL