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Lag0035159 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035159
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein of unknown function (DUF1162)
Genome locationchr3:15950985..15954545
RNA-Seq ExpressionLag0035159
SyntenyLag0035159
Gene Ontology termsNA
InterPro domainsIPR031642 - VPS13, repeated coiled region


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149963.1 uncharacterized protein LOC111018256 isoform X1 [Momordica charantia]7.6e-5180Show/hide
Query:  LEDVVLISNILPLCDKDVEETGSASCHFQVEVSPKHEVNLSVKVMLNPLEVTYDAKFFLCLLEFFDGFKSFESLHRR----VLSTLNGIENAKARLLSKA
        L   VLI   +PLC+KDVEETG  SC FQV+VSPK EVNLSVKVML+PLEVTYDAKF LCLLEFFDGFKSF+SLHRR    VLSTLNGIENA+ARLLSKA
Subjt:  LEDVVLISNILPLCDKDVEETGSASCHFQVEVSPKHEVNLSVKVMLNPLEVTYDAKFFLCLLEFFDGFKSFESLHRR----VLSTLNGIENAKARLLSKA

Query:  QCIMSGYKKVMWDITVNGIAVRVPWNTPSGQNNLV
        +CIMS YK+VMWDITVNGI V VPWNTPS QNNLV
Subjt:  QCIMSGYKKVMWDITVNGIAVRVPWNTPSGQNNLV
XP_022149964.1 uncharacterized protein LOC111018256 isoform X2 [Momordica charantia]1.4e-5282.44Show/hide
Query:  LEDVVLISNILPLCDKDVEETGSASCHFQVEVSPKHEVNLSVKVMLNPLEVTYDAKFFLCLLEFFDGFKSFESLHRRVLSTLNGIENAKARLLSKAQCIM
        L   VLI   +PLC+KDVEETG  SC FQV+VSPK EVNLSVKVML+PLEVTYDAKF LCLLEFFDGFKSF+SLHRRVLSTLNGIENA+ARLLSKA+CIM
Subjt:  LEDVVLISNILPLCDKDVEETGSASCHFQVEVSPKHEVNLSVKVMLNPLEVTYDAKFFLCLLEFFDGFKSFESLHRRVLSTLNGIENAKARLLSKAQCIM

Query:  SGYKKVMWDITVNGIAVRVPWNTPSGQNNLV
        S YK+VMWDITVNGI V VPWNTPS QNNLV
Subjt:  SGYKKVMWDITVNGIAVRVPWNTPSGQNNLV
XP_022149965.1 uncharacterized protein LOC111018256 isoform X3 [Momordica charantia]7.6e-5180Show/hide
Query:  LEDVVLISNILPLCDKDVEETGSASCHFQVEVSPKHEVNLSVKVMLNPLEVTYDAKFFLCLLEFFDGFKSFESLHRR----VLSTLNGIENAKARLLSKA
        L   VLI   +PLC+KDVEETG  SC FQV+VSPK EVNLSVKVML+PLEVTYDAKF LCLLEFFDGFKSF+SLHRR    VLSTLNGIENA+ARLLSKA
Subjt:  LEDVVLISNILPLCDKDVEETGSASCHFQVEVSPKHEVNLSVKVMLNPLEVTYDAKFFLCLLEFFDGFKSFESLHRR----VLSTLNGIENAKARLLSKA

Query:  QCIMSGYKKVMWDITVNGIAVRVPWNTPSGQNNLV
        +CIMS YK+VMWDITVNGI V VPWNTPS QNNLV
Subjt:  QCIMSGYKKVMWDITVNGIAVRVPWNTPSGQNNLV
XP_022988633.1 uncharacterized protein LOC111485823 isoform X1 [Cucurbita maxima]3.2e-4980.92Show/hide
Query:  LEDVVLISNILPLCDKDVEETGSASCHFQVEVSPKHEVNLSVKVMLNPLEVTYDAKFFLCLLEFFDGFKSFESLHRRVLSTLNGIENAKARLLSKAQCIM
        L   VLI   +P C+K V ETG+ SC FQV+VSPKHEVNLSVKV LNPL+VTYDAKFFL L EFFDGFKSFESLH R LSTLNGIENAKARLLSKAQCIM
Subjt:  LEDVVLISNILPLCDKDVEETGSASCHFQVEVSPKHEVNLSVKVMLNPLEVTYDAKFFLCLLEFFDGFKSFESLHRRVLSTLNGIENAKARLLSKAQCIM

Query:  SGYKKVMWDITVNGIAVRVPWNTPSGQNNLV
        S YKKVMWDITVNGI V VPWNTPS QNNLV
Subjt:  SGYKKVMWDITVNGIAVRVPWNTPSGQNNLV
XP_023516585.1 uncharacterized protein LOC111780422 isoform X2 [Cucurbita pepo subsp. pepo]3.2e-4980.92Show/hide
Query:  LEDVVLISNILPLCDKDVEETGSASCHFQVEVSPKHEVNLSVKVMLNPLEVTYDAKFFLCLLEFFDGFKSFESLHRRVLSTLNGIENAKARLLSKAQCIM
        L   VLI   +P C+K V ETG+ SC FQV+VSPKHEVNLSVKV LNPL+VTYDAKFFL L EFFDGFKSFESLH R LSTLNGIENAKARLLSKAQCIM
Subjt:  LEDVVLISNILPLCDKDVEETGSASCHFQVEVSPKHEVNLSVKVMLNPLEVTYDAKFFLCLLEFFDGFKSFESLHRRVLSTLNGIENAKARLLSKAQCIM

Query:  SGYKKVMWDITVNGIAVRVPWNTPSGQNNLV
        S YKKVMWDITVNGI V VPWNTPS QNNLV
Subjt:  SGYKKVMWDITVNGIAVRVPWNTPSGQNNLV
TrEMBL top hitse value%identityAlignment
A0A6J1D861 uncharacterized protein LOC111018256 isoform X13.7e-5180Show/hide
Query:  LEDVVLISNILPLCDKDVEETGSASCHFQVEVSPKHEVNLSVKVMLNPLEVTYDAKFFLCLLEFFDGFKSFESLHRR----VLSTLNGIENAKARLLSKA
        L   VLI   +PLC+KDVEETG  SC FQV+VSPK EVNLSVKVML+PLEVTYDAKF LCLLEFFDGFKSF+SLHRR    VLSTLNGIENA+ARLLSKA
Subjt:  LEDVVLISNILPLCDKDVEETGSASCHFQVEVSPKHEVNLSVKVMLNPLEVTYDAKFFLCLLEFFDGFKSFESLHRR----VLSTLNGIENAKARLLSKA

Query:  QCIMSGYKKVMWDITVNGIAVRVPWNTPSGQNNLV
        +CIMS YK+VMWDITVNGI V VPWNTPS QNNLV
Subjt:  QCIMSGYKKVMWDITVNGIAVRVPWNTPSGQNNLV
A0A6J1D8L0 uncharacterized protein LOC111018256 isoform X26.7e-5382.44Show/hide
Query:  LEDVVLISNILPLCDKDVEETGSASCHFQVEVSPKHEVNLSVKVMLNPLEVTYDAKFFLCLLEFFDGFKSFESLHRRVLSTLNGIENAKARLLSKAQCIM
        L   VLI   +PLC+KDVEETG  SC FQV+VSPK EVNLSVKVML+PLEVTYDAKF LCLLEFFDGFKSF+SLHRRVLSTLNGIENA+ARLLSKA+CIM
Subjt:  LEDVVLISNILPLCDKDVEETGSASCHFQVEVSPKHEVNLSVKVMLNPLEVTYDAKFFLCLLEFFDGFKSFESLHRRVLSTLNGIENAKARLLSKAQCIM

Query:  SGYKKVMWDITVNGIAVRVPWNTPSGQNNLV
        S YK+VMWDITVNGI V VPWNTPS QNNLV
Subjt:  SGYKKVMWDITVNGIAVRVPWNTPSGQNNLV
A0A6J1DA10 uncharacterized protein LOC111018256 isoform X33.7e-5180Show/hide
Query:  LEDVVLISNILPLCDKDVEETGSASCHFQVEVSPKHEVNLSVKVMLNPLEVTYDAKFFLCLLEFFDGFKSFESLHRR----VLSTLNGIENAKARLLSKA
        L   VLI   +PLC+KDVEETG  SC FQV+VSPK EVNLSVKVML+PLEVTYDAKF LCLLEFFDGFKSF+SLHRR    VLSTLNGIENA+ARLLSKA
Subjt:  LEDVVLISNILPLCDKDVEETGSASCHFQVEVSPKHEVNLSVKVMLNPLEVTYDAKFFLCLLEFFDGFKSFESLHRR----VLSTLNGIENAKARLLSKA

Query:  QCIMSGYKKVMWDITVNGIAVRVPWNTPSGQNNLV
        +CIMS YK+VMWDITVNGI V VPWNTPS QNNLV
Subjt:  QCIMSGYKKVMWDITVNGIAVRVPWNTPSGQNNLV
A0A6J1JM44 uncharacterized protein LOC111485823 isoform X21.6e-4980.92Show/hide
Query:  LEDVVLISNILPLCDKDVEETGSASCHFQVEVSPKHEVNLSVKVMLNPLEVTYDAKFFLCLLEFFDGFKSFESLHRRVLSTLNGIENAKARLLSKAQCIM
        L   VLI   +P C+K V ETG+ SC FQV+VSPKHEVNLSVKV LNPL+VTYDAKFFL L EFFDGFKSFESLH R LSTLNGIENAKARLLSKAQCIM
Subjt:  LEDVVLISNILPLCDKDVEETGSASCHFQVEVSPKHEVNLSVKVMLNPLEVTYDAKFFLCLLEFFDGFKSFESLHRRVLSTLNGIENAKARLLSKAQCIM

Query:  SGYKKVMWDITVNGIAVRVPWNTPSGQNNLV
        S YKKVMWDITVNGI V VPWNTPS QNNLV
Subjt:  SGYKKVMWDITVNGIAVRVPWNTPSGQNNLV
A0A6J1JMV4 uncharacterized protein LOC111485823 isoform X11.6e-4980.92Show/hide
Query:  LEDVVLISNILPLCDKDVEETGSASCHFQVEVSPKHEVNLSVKVMLNPLEVTYDAKFFLCLLEFFDGFKSFESLHRRVLSTLNGIENAKARLLSKAQCIM
        L   VLI   +P C+K V ETG+ SC FQV+VSPKHEVNLSVKV LNPL+VTYDAKFFL L EFFDGFKSFESLH R LSTLNGIENAKARLLSKAQCIM
Subjt:  LEDVVLISNILPLCDKDVEETGSASCHFQVEVSPKHEVNLSVKVMLNPLEVTYDAKFFLCLLEFFDGFKSFESLHRRVLSTLNGIENAKARLLSKAQCIM

Query:  SGYKKVMWDITVNGIAVRVPWNTPSGQNNLV
        S YKKVMWDITVNGI V VPWNTPS QNNLV
Subjt:  SGYKKVMWDITVNGIAVRVPWNTPSGQNNLV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G24740.1 Protein of unknown function (DUF1162)5.5e-1538.32Show/hide
Query:  QVEVSPKHEVNLSVKVMLNPLEVTYDAKFFLCLLEFFDGFKSFESLHRRVLSTLNGIENAKARLLSKAQCIMSGYKKVMWDITVNGIAVRVPWNTPSGQN
        ++E+S  H+V LS+K  L PLE  YD  F L +  FF G + F+  H R+LS+LNG+E ++ RL +KA+ ++S   KV WD+ +  + +  P      ++
Subjt:  QVEVSPKHEVNLSVKVMLNPLEVTYDAKFFLCLLEFFDGFKSFESLHRRVLSTLNGIENAKARLLSKAQCIMSGYKKVMWDITVNGIAVRVPWNTPSGQN

Query:  -NLVNAL
         NLV  L
Subjt:  -NLVNAL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTGGAAGATGTTGTTCTAATTAGCAACATTCTGCCTCTATGTGACAAAGATGTTGAAGAGACTGGTTCTGCTTCCTGTCATTTCCAAGTTGAGGTTTCACCCAA
ACATGAGGTTAACCTGTCAGTAAAGGTGATGCTGAATCCATTAGAAGTTACTTACGATGCCAAGTTTTTTCTTTGTTTGTTAGAGTTTTTTGATGGATTTAAGTCCTTTG
AATCTCTTCACAGAAGGGTTCTTTCAACCCTGAATGGAATTGAAAATGCCAAAGCTCGATTGCTATCCAAAGCTCAATGCATAATGTCAGGGTATAAGAAAGTGATGTGG
GACATTACTGTCAATGGCATTGCTGTCCGTGTTCCTTGGAATACACCTTCGGGACAAAATAACTTGGTAAATGCCCTTGTTTTTGCTGCAAGAATATGTACATTTTGTGG
GAATGCACTCTTAGATAGTGGCTTACCTGGTACCAGCAATAAGAACTTGGCTTTACCACTTGCACTCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATTGGAAGATGTTGTTCTAATTAGCAACATTCTGCCTCTATGTGACAAAGATGTTGAAGAGACTGGTTCTGCTTCCTGTCATTTCCAAGTTGAGGTTTCACCCAA
ACATGAGGTTAACCTGTCAGTAAAGGTGATGCTGAATCCATTAGAAGTTACTTACGATGCCAAGTTTTTTCTTTGTTTGTTAGAGTTTTTTGATGGATTTAAGTCCTTTG
AATCTCTTCACAGAAGGGTTCTTTCAACCCTGAATGGAATTGAAAATGCCAAAGCTCGATTGCTATCCAAAGCTCAATGCATAATGTCAGGGTATAAGAAAGTGATGTGG
GACATTACTGTCAATGGCATTGCTGTCCGTGTTCCTTGGAATACACCTTCGGGACAAAATAACTTGGTAAATGCCCTTGTTTTTGCTGCAAGAATATGTACATTTTGTGG
GAATGCACTCTTAGATAGTGGCTTACCTGGTACCAGCAATAAGAACTTGGCTTTACCACTTGCACTCTTCTAG
Protein sequenceShow/hide protein sequence
MELEDVVLISNILPLCDKDVEETGSASCHFQVEVSPKHEVNLSVKVMLNPLEVTYDAKFFLCLLEFFDGFKSFESLHRRVLSTLNGIENAKARLLSKAQCIMSGYKKVMW
DITVNGIAVRVPWNTPSGQNNLVNALVFAARICTFCGNALLDSGLPGTSNKNLALPLALF