CuGenDBv2

Gene ID	Lag0035162
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Polyubiquitin
Genome location	chr3:15972540..15972953
RNA-Seq Expression	Lag0035162
Synteny	Lag0035162
Gene Ontology terms	GO:0016567 - protein ubiquitination (biological process) GO:0019941 - modification-dependent protein catabolic process (biological process) GO:0005634 - nucleus (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0031386 - protein tag (molecular function) GO:0031625 - ubiquitin protein ligase binding (molecular function)
InterPro domains	IPR000626 - Ubiquitin-like domain IPR019954 - Ubiquitin conserved site IPR019956 - Ubiquitin domain IPR029071 - Ubiquitin-like domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAB2044267.1 hypothetical protein ES319_D01G076900v1 [Gossypium barbadense]

1.7e-64

97.81

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
        MQIFVKTLTGKTITLEVESSDTI KVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID

Query:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI
        NVKAKIQDKEGIP DQQRLIFAGKQLE+GRTLADYNI
Subjt:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI

NP_001353310.1 polyubiquitin [Solanum lycopersicum]

1.7e-64

97.81

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
        MQIFVKTLTGKTITLEVESSDTI  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID

Query:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI
        NVKAKIQDKEGIPSDQQRLIFAGKQLE+GRTLADYNI
Subjt:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI

VAI55726.1 unnamed protein product [Triticum turgidum subsp. durum]

1.7e-64

97.81

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
        MQIFVKTLTGKTITLEVESSDTI  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID

Query:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI
        NVKAKIQDKEGIPSDQQRLIFAGKQLE+GRTLADYNI
Subjt:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI

VAI55746.1 unnamed protein product [Triticum turgidum subsp. durum]

1.7e-64

97.81

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
        MQIFVKTLTGKTITLEVESSDTI  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID

Query:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI
        NVKAKIQDKEGIPSDQQRLIFAGKQLE+GRTLADYNI
Subjt:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI

XP_039785111.1 polyubiquitin-like [Panicum virgatum]

1.7e-64

97.81

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
        MQIFVKTLTGKTITLEVESSDTI  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID

Query:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI
        NVKAKIQDKEGIP DQQRLIFAGKQLENGRTLADYNI
Subjt:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI

TrEMBL top hits

e value

%identity

Alignment

A0A3Q7IBU5 Uncharacterized protein

8.1e-65

97.81

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
        MQIFVKTLTGKTITLEVESSDTI  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID

Query:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI
        NVKAKIQDKEGIPSDQQRLIFAGKQLE+GRTLADYNI
Subjt:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI

A0A446W6G8 Uncharacterized protein

8.1e-65

97.81

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
        MQIFVKTLTGKTITLEVESSDTI  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID

Query:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI
        NVKAKIQDKEGIPSDQQRLIFAGKQLE+GRTLADYNI
Subjt:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI

A0A446W6J2 Uncharacterized protein

8.1e-65

97.81

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
        MQIFVKTLTGKTITLEVESSDTI  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID

Query:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI
        NVKAKIQDKEGIPSDQQRLIFAGKQLE+GRTLADYNI
Subjt:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI

A0A5D2DMW5 Uncharacterized protein

8.1e-65

97.81

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
        MQIFVKTLTGKTITLEVESSDTI KVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID

Query:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI
        NVKAKIQDKEGIP DQQRLIFAGKQLE+GRTLADYNI
Subjt:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI

A0A5J5SLI5 Uncharacterized protein

8.1e-65

97.81

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
        MQIFVKTLTGKTITLEVESSDTI KVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID

Query:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI
        NVKAKIQDKEGIP DQQRLIFAGKQLE+GRTLADYNI
Subjt:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI

SwissProt top hits

e value

%identity

Alignment

P0CG84 Polyubiquitin (Fragment)

8.3e-67

97.08

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
        MQIFVKTLTGKTITLEVESSDTI  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID

Query:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI
        NVKAKIQDKEGIP DQQRLIFAGKQLE+GRTLADYNI
Subjt:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI

P0CG85 Polyubiquitin

8.3e-67

97.08

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
        MQIFVKTLTGKTITLEVESSDTI  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID

Query:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI
        NVKAKIQDKEGIP DQQRLIFAGKQLE+GRTLADYNI
Subjt:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI

P0CH04 Polyubiquitin

8.3e-67

97.08

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
        MQIFVKTLTGKTITLEVESSDTI  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID

Query:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI
        NVKAKIQDKEGIP DQQRLIFAGKQLE+GRTLADYNI
Subjt:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI

P0CH05 Polyubiquitin

8.3e-67

97.08

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
        MQIFVKTLTGKTITLEVESSDTI  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID

Query:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI
        NVKAKIQDKEGIP DQQRLIFAGKQLE+GRTLADYNI
Subjt:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI

P69309 Polyubiquitin

8.3e-67

97.08

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
        MQIFVKTLTGKTITLEVESSDTI  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID

Query:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI
        NVKAKIQDKEGIP DQQRLIFAGKQLE+GRTLADYNI
Subjt:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI

Arabidopsis top hits

e value

%identity

Alignment

AT4G02890.1 Ubiquitin family protein

5.9e-68

97.08

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
        MQIFVKTLTGKTITLEVESSDTI  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID

Query:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI
        NVKAKIQDKEGIP DQQRLIFAGKQLE+GRTLADYNI
Subjt:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI

AT4G05050.1 ubiquitin 11

5.9e-68

97.08

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
        MQIFVKTLTGKTITLEVESSDTI  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID

Query:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI
        NVKAKIQDKEGIP DQQRLIFAGKQLE+GRTLADYNI
Subjt:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI

AT4G05320.2 polyubiquitin 10

5.9e-68

97.08

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
        MQIFVKTLTGKTITLEVESSDTI  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID

Query:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI
        NVKAKIQDKEGIP DQQRLIFAGKQLE+GRTLADYNI
Subjt:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI

AT4G05320.3 polyubiquitin 10

5.9e-68

97.08

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
        MQIFVKTLTGKTITLEVESSDTI  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID

Query:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI
        NVKAKIQDKEGIP DQQRLIFAGKQLE+GRTLADYNI
Subjt:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI

AT4G05320.4 polyubiquitin 10

5.9e-68

97.08

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
        MQIFVKTLTGKTITLEVESSDTI  VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID

Query:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI
        NVKAKIQDKEGIP DQQRLIFAGKQLE+GRTLADYNI
Subjt:  NVKAKIQDKEGIPSDQQRLIFAGKQLENGRTLADYNI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCAAATCTTCGTCAAAACCCTCACAGGCAAGACCATCACCCTCGAGGTGGAGTCTTCTGATACCATCGTCAAAGTCAAGGCCAAGATCCAGGATAAGGAAGGAATCCC
TCCGGATCAACAACGTTTGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTTGCTGACTACAACATTCAGAAGGAGTCAACTCTCCACCTCGTCCTAAGGCTTC
GTGGTGGCATGCAAATTTTCGTCAAGACCCTTACCGGTAAGACAATCACCCTTGAGGTGGAGTCTTCCGACACCATTGACAACGTAAAGGCCAAGATCCAGGACAAGGAA
GGAATTCCCTCGGACCAGCAACGTCTGATCTTCGCTGGAAAGCAACTTGAGAACGGTCGAACCCTTGCCGACTACAACATCTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MQIFVKTLTGKTITLEVESSDTIVKVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE
GIPSDQQRLIFAGKQLENGRTLADYNI

Lag0035162 (gene) of Sponge gourd (AG-4) v1 genome