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Lag0035165 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035165
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:16018467..16019920
RNA-Seq ExpressionLag0035165
SyntenyLag0035165
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN69768.1 hypothetical protein VITISV_022063 [Vitis vinifera]8.2e-1137.38Show/hide
Query:  LLMERLFWNFLWKEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKKALFVKWIWCYNNERDAIWRKLIKVGDDATTPVWIALWL--FPLASQFPLLYR
        L +E++  +FLW+ GA     H+VNW+ + L   KG L +  L    K L  KWIW +  ERDA+WR++I VG+      W   W    PL    P L+ 
Subjt:  LLMERLFWNFLWKEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKKALFVKWIWCYNNERDAIWRKLIKVGDDATTPVWIALWL--FPLASQFPLLYR

Query:  NLKDEEA
            EEA
Subjt:  NLKDEEA

KAE8691187.1 hypothetical protein F3Y22_tig00110890pilonHSYRG00015 [Hibiscus syriacus]2.6e-0940Show/hide
Query:  NFLWKEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKKALFVKWIWCYNNERDAIWRKLIKVGDDATT
        NFLW EG+S++ IH VNW ++ LS+++G L +  L    + L  KW+W + NE+D++W+ +I    +A+T
Subjt:  NFLWKEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKKALFVKWIWCYNNERDAIWRKLIKVGDDATT

KAE8714051.1 Myosin-15 [Hibiscus syriacus]2.0e-0940Show/hide
Query:  NFLWKEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKKALFVKWIWCYNNERDAIWRKLIKVGDDATT
        NFLW EG+S++ IH VNW ++ LS+++G L +  L    + L  KW+W + NE+D++W+ +I    +A+T
Subjt:  NFLWKEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKKALFVKWIWCYNNERDAIWRKLIKVGDDATT

KAF5460976.1 hypothetical protein F2P56_020808 [Juglans regia]1.8e-1029.75Show/hide
Query:  WSNQGGPPLETQSKIELFFGI--SLEKGTTGVLTFSFPLLMERLFWNFLWKEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKKALFVKWIWCYNNER
        WS+ GGP         ++ GI   +E+   GV        +E+ F +FLW         HL+ W  +   L  G L LC+L+   KAL  KW+W Y+ ER
Subjt:  WSNQGGPPLETQSKIELFFGI--SLEKGTTGVLTFSFPLLMERLFWNFLWKEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKKALFVKWIWCYNNER

Query:  DAIWRKLI------------KVGDDATTPVWIALWLFPLASQ--FPLLYRNLKDEEAI
         A+WR+++             VG       W   W   +A +  FP  +R   D++AI
Subjt:  DAIWRKLI------------KVGDDATTPVWIALWLFPLASQ--FPLLYRNLKDEEAI

RVW80570.1 putative ribonuclease H protein [Vitis vinifera]1.5e-0935.54Show/hide
Query:  LLMERLFWNFLWKEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKKALFVKWIWCYNNERDAIWRKLI--KVGDDATTPVWIALWL------FPLASQ
        L +ER+   FLW  GA    IHLV W  + L  D G L + SL    KAL  KW W +  ER+A W ++I  K G++     WI  W        PL   
Subjt:  LLMERLFWNFLWKEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKKALFVKWIWCYNNERDAIWRKLI--KVGDDATTPVWIALWL------FPLASQ

Query:  FPLLYRNLKDEEAIEWEEPVF
        FP L+     ++A  W + V+
Subjt:  FPLLYRNLKDEEAIEWEEPVF

TrEMBL top hitse value%identityAlignment
A0A2N9FJQ0 Uncharacterized protein1.5e-1034.19Show/hide
Query:  MERLFWNFLWKEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKKALFVKWIWCYNNERDAIWRKLIKVGDDATTPVW----------IALWLF----P
        +E +  NFLW++    T  HLVNW+ I      G LN+ SL+   +AL  KW+W +  ER+ +WR+++ V   A    W          + LW F    P
Subjt:  MERLFWNFLWKEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKKALFVKWIWCYNNERDAIWRKLIKVGDDATTPVW----------IALWLF----P

Query:  LASQFPLLYRNLKDEEA
        L S +P LYR  + ++A
Subjt:  LASQFPLLYRNLKDEEA

A0A438H7P3 Putative ribonuclease H protein7.5e-1035.54Show/hide
Query:  LLMERLFWNFLWKEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKKALFVKWIWCYNNERDAIWRKLI--KVGDDATTPVWIALWL------FPLASQ
        L +ER+   FLW  GA    IHLV W  + L  D G L + SL    KAL  KW W +  ER+A W ++I  K G++     WI  W        PL   
Subjt:  LLMERLFWNFLWKEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKKALFVKWIWCYNNERDAIWRKLI--KVGDDATTPVWIALWL------FPLASQ

Query:  FPLLYRNLKDEEAIEWEEPVF
        FP L+     ++A  W + V+
Subjt:  FPLLYRNLKDEEAIEWEEPVF

A0A6A3BDL8 Myosin-159.8e-1040Show/hide
Query:  NFLWKEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKKALFVKWIWCYNNERDAIWRKLIKVGDDATT
        NFLW EG+S++ IH VNW ++ LS+++G L +  L    + L  KW+W + NE+D++W+ +I    +A+T
Subjt:  NFLWKEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKKALFVKWIWCYNNERDAIWRKLIKVGDDATT

A0A7N2LZJ6 Uncharacterized protein9.8e-1033.33Show/hide
Query:  MERLFWNFLWKEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKKALFVKWIWCYNNERDAIWRKLIKVGDDATTPVWIALWLFPLASQFPLLYRNLKD
        +E+L  +FLW        IHLVNW+K+   +  G L +  LK    AL  KW+W Y  E DA WR++I   D             PL  +FP LY   + 
Subjt:  MERLFWNFLWKEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKKALFVKWIWCYNNERDAIWRKLIKVGDDATTPVWIALWLFPLASQFPLLYRNLKD

Query:  EEA-IEWEEPVFALSRVSLIKGRFLDMDN
         EA +    P  A    +   G+ L +DN
Subjt:  EEA-IEWEEPVFALSRVSLIKGRFLDMDN

A5B747 Uncharacterized protein4.0e-1137.38Show/hide
Query:  LLMERLFWNFLWKEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKKALFVKWIWCYNNERDAIWRKLIKVGDDATTPVWIALWL--FPLASQFPLLYR
        L +E++  +FLW+ GA     H+VNW+ + L   KG L +  L    K L  KWIW +  ERDA+WR++I VG+      W   W    PL    P L+ 
Subjt:  LLMERLFWNFLWKEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKKALFVKWIWCYNNERDAIWRKLIKVGDDATTPVWIALWL--FPLASQFPLLYR

Query:  NLKDEEA
            EEA
Subjt:  NLKDEEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAAGATCCTCCACTGCTGTCCTGCAATGAATACAACAAAGTGGTCCAACCAAGGTGGACCACCTCTCGAGACCCAATCCAAGATAGAGCTTTTCTTTGGAATCTC
TTTGGAGAAAGGAACAACGGGGGTTTTAACTTTTAGTTTTCCTCTTTTGATGGAGAGATTATTTTGGAACTTTTTATGGAAGGAGGGAGCATCTAGAACAGGCATCCATC
TTGTGAATTGGAACAAAATTCTTCTCTCCTTGGACAAGGGAAGTCTCAATCTATGTTCCTTGAAAGATGAGAAAAAAGCACTCTTTGTAAAATGGATATGGTGTTACAAC
AATGAAAGAGATGCTATATGGAGGAAACTTATCAAAGTGGGAGATGATGCAACGACCCCTGTTTGGATCGCCCTTTGGTTATTTCCACTGGCTTCCCAATTCCCCTTGTT
ATACAGGAACTTGAAGGATGAAGAGGCAATTGAATGGGAAGAACCTGTATTTGCCCTCTCTCGAGTTTCTCTCATAAAGGGAAGATTCTTGGATATGGACAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCAAGATCCTCCACTGCTGTCCTGCAATGAATACAACAAAGTGGTCCAACCAAGGTGGACCACCTCTCGAGACCCAATCCAAGATAGAGCTTTTCTTTGGAATCTC
TTTGGAGAAAGGAACAACGGGGGTTTTAACTTTTAGTTTTCCTCTTTTGATGGAGAGATTATTTTGGAACTTTTTATGGAAGGAGGGAGCATCTAGAACAGGCATCCATC
TTGTGAATTGGAACAAAATTCTTCTCTCCTTGGACAAGGGAAGTCTCAATCTATGTTCCTTGAAAGATGAGAAAAAAGCACTCTTTGTAAAATGGATATGGTGTTACAAC
AATGAAAGAGATGCTATATGGAGGAAACTTATCAAAGTGGGAGATGATGCAACGACCCCTGTTTGGATCGCCCTTTGGTTATTTCCACTGGCTTCCCAATTCCCCTTGTT
ATACAGGAACTTGAAGGATGAAGAGGCAATTGAATGGGAAGAACCTGTATTTGCCCTCTCTCGAGTTTCTCTCATAAAGGGAAGATTCTTGGATATGGACAACTAG
Protein sequenceShow/hide protein sequence
MFKILHCCPAMNTTKWSNQGGPPLETQSKIELFFGISLEKGTTGVLTFSFPLLMERLFWNFLWKEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKKALFVKWIWCYN
NERDAIWRKLIKVGDDATTPVWIALWLFPLASQFPLLYRNLKDEEAIEWEEPVFALSRVSLIKGRFLDMDN