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Lag0035186 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035186
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Genome locationchr3:16270181..16270723
RNA-Seq ExpressionLag0035186
SyntenyLag0035186
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145141.1 uncharacterized protein LOC111014656 [Momordica charantia]2.0e-4150Show/hide
Query:  MNHIRGWLQAKYYKRKNKHSSNLSQWSKFAMEILEKAEEKSRRHVVKPIARYEFDVEDEHLGGRVNLHARTCTCREFEYYKLSCSHVIAACTYRQIDYHT
        ++HIRG LQ  +Y+R+   SS  S  S +A E++ +A + +RRH+V  I ++ F+V D +L   V+L  +TCT REF+Y+K+ CSH IA  + R I+ +T
Subjt:  MNHIRGWLQAKYYKRKNKHSSNLSQWSKFAMEILEKAEEKSRRHVVKPIARYEFDVEDEHLGGRVNLHARTCTCREFEYYKLSCSHVIAACTYRQIDYHT

Query:  LCSKVYHVDSLIDAYAQPIQPLGHESEWKRPPQFVDVEVLPLRRVPRVGRRPTLRIPSTGEVRHVRKCSRCGNRDHNRKT
        LC + Y V+S + AYA+PI P+G  S WK  P FV+++V P ++V RVGRR T+RIPSTGEVR  RKCSRCG   HNRKT
Subjt:  LCSKVYHVDSLIDAYAQPIQPLGHESEWKRPPQFVDVEVLPLRRVPRVGRRPTLRIPSTGEVRHVRKCSRCGNRDHNRKT
XP_022154610.1 uncharacterized protein LOC111021833 [Momordica charantia]6.4e-4048.89Show/hide
Query:  MNHIRGWLQAKYYKRKNKHSSNLSQWSKFAMEILEKAEEKSRRHVVKPIARYEFDVEDEHLGGRVNLHARTCTCREFEYYKLSCSHVIAACTYRQIDYHT
        ++HIRG L   +Y R+   +S  +  S +A  +  +  + +RRHVV  I ++ F V D +  G V+L+A TC+CREF+Y+K+ CSHVIAA   R I+ ++
Subjt:  MNHIRGWLQAKYYKRKNKHSSNLSQWSKFAMEILEKAEEKSRRHVVKPIARYEFDVEDEHLGGRVNLHARTCTCREFEYYKLSCSHVIAACTYRQIDYHT

Query:  LCSKVYHVDSLIDAYAQPIQPLGHESEWKRPPQFVDVEVLPLRRVPRVGRRPTLRIPSTGEVRHVRKCSRCGNRDHNRKT
        LC + Y  +S I AYA+PI P+GH S W   P+FV++ V P + VPRVGRR T RIPSTGEVR  RKC RCG   HNRKT
Subjt:  LCSKVYHVDSLIDAYAQPIQPLGHESEWKRPPQFVDVEVLPLRRVPRVGRRPTLRIPSTGEVRHVRKCSRCGNRDHNRKT
XP_022154963.1 uncharacterized protein LOC111022107 [Momordica charantia]4.9e-4048.89Show/hide
Query:  MNHIRGWLQAKYYKRKNKHSSNLSQWSKFAMEILEKAEEKSRRHVVKPIARYEFDVEDEHLGGRVNLHARTCTCREFEYYKLSCSHVIAACTYRQIDYHT
        ++HIRG LQ  +Y+R+   SS  S  S +A E++ +A + +R H+V  I  + F+V D +L G V+L ++TCTCREF+Y+K+ CSH IAA   R I+ +T
Subjt:  MNHIRGWLQAKYYKRKNKHSSNLSQWSKFAMEILEKAEEKSRRHVVKPIARYEFDVEDEHLGGRVNLHARTCTCREFEYYKLSCSHVIAACTYRQIDYHT

Query:  LCSKVYHVDSLIDAYAQPIQPLGHESEWKRPPQFVDVEVLPLRRVPRVGRRPTLRIPSTGEVRHVRKCSRCGNRDHNRKT
        LC + Y V+S +   A+PI P+G  S WK  P FV+++V P ++V RVGRR T+RIP TGEVR  RKCSRCG   HN KT
Subjt:  LCSKVYHVDSLIDAYAQPIQPLGHESEWKRPPQFVDVEVLPLRRVPRVGRRPTLRIPSTGEVRHVRKCSRCGNRDHNRKT
XP_022158655.1 uncharacterized protein LOC111025117 [Momordica charantia]3.2e-3950.3Show/hide
Query:  YYKRKNKHSSNLSQWSKFAMEILEKAEEKSRRHVVKPIARYEFDVEDEHLGGRVNLHARTCTCREFEYYKLSCSHVIAACTYRQIDYHTLCSKVYHVDSL
        +Y+R+   SS  S  S +A E++ +A + SRRH+V  I ++ F+V D +L G V+L ++TCTCREF+Y+K+ CSH IAA   R I+ +TLC + Y V+S 
Subjt:  YYKRKNKHSSNLSQWSKFAMEILEKAEEKSRRHVVKPIARYEFDVEDEHLGGRVNLHARTCTCREFEYYKLSCSHVIAACTYRQIDYHTLCSKVYHVDSL

Query:  IDAYAQPIQPLGHESEWKRPPQFVDVEVLPLRRVPRVGRRPTLRIPSTGEVRHVRKCSRCGNRDHNRKT
        + A+A+PI  +G  + WK  P FV+++V P ++V RVGRR T+RIPSTGEVR  RKCSRCG   HNRKT
Subjt:  IDAYAQPIQPLGHESEWKRPPQFVDVEVLPLRRVPRVGRRPTLRIPSTGEVRHVRKCSRCGNRDHNRKT
XP_022159268.1 uncharacterized protein LOC111025678 [Momordica charantia]5.8e-4149.44Show/hide
Query:  MNHIRGWLQAKYYKRKNKHSSNLSQWSKFAMEILEKAEEKSRRHVVKPIARYEFDVEDEHLGGRVNLHARTCTCREFEYYKLSCSHVIAACTYRQIDYHT
        ++HIRG LQ  +Y R+   +S  +  S +A  +  +  + +RRHVV  I ++ F V D +L G V+L+A  C+CREF+Y+K+ CSH IAA T R I+ ++
Subjt:  MNHIRGWLQAKYYKRKNKHSSNLSQWSKFAMEILEKAEEKSRRHVVKPIARYEFDVEDEHLGGRVNLHARTCTCREFEYYKLSCSHVIAACTYRQIDYHT

Query:  LCSKVYHVDSLIDAYAQPIQPLGHESEWKRPPQFVDVEVLPLRRVPRVGRRPTLRIPSTGEVRHVRKCSRCGNRDHNRKT
        LC + Y  +S I AYA+PI P+GH S W   P+FV++ V P + VPRVGRR T+RIPSTGEVR  RKC RCG   HNRKT
Subjt:  LCSKVYHVDSLIDAYAQPIQPLGHESEWKRPPQFVDVEVLPLRRVPRVGRRPTLRIPSTGEVRHVRKCSRCGNRDHNRKT
TrEMBL top hitse value%identityAlignment
A0A6J1CVG8 uncharacterized protein LOC1110146569.6e-4250Show/hide
Query:  MNHIRGWLQAKYYKRKNKHSSNLSQWSKFAMEILEKAEEKSRRHVVKPIARYEFDVEDEHLGGRVNLHARTCTCREFEYYKLSCSHVIAACTYRQIDYHT
        ++HIRG LQ  +Y+R+   SS  S  S +A E++ +A + +RRH+V  I ++ F+V D +L   V+L  +TCT REF+Y+K+ CSH IA  + R I+ +T
Subjt:  MNHIRGWLQAKYYKRKNKHSSNLSQWSKFAMEILEKAEEKSRRHVVKPIARYEFDVEDEHLGGRVNLHARTCTCREFEYYKLSCSHVIAACTYRQIDYHT

Query:  LCSKVYHVDSLIDAYAQPIQPLGHESEWKRPPQFVDVEVLPLRRVPRVGRRPTLRIPSTGEVRHVRKCSRCGNRDHNRKT
        LC + Y V+S + AYA+PI P+G  S WK  P FV+++V P ++V RVGRR T+RIPSTGEVR  RKCSRCG   HNRKT
Subjt:  LCSKVYHVDSLIDAYAQPIQPLGHESEWKRPPQFVDVEVLPLRRVPRVGRRPTLRIPSTGEVRHVRKCSRCGNRDHNRKT
A0A6J1DK35 uncharacterized protein LOC1110218333.1e-4048.89Show/hide
Query:  MNHIRGWLQAKYYKRKNKHSSNLSQWSKFAMEILEKAEEKSRRHVVKPIARYEFDVEDEHLGGRVNLHARTCTCREFEYYKLSCSHVIAACTYRQIDYHT
        ++HIRG L   +Y R+   +S  +  S +A  +  +  + +RRHVV  I ++ F V D +  G V+L+A TC+CREF+Y+K+ CSHVIAA   R I+ ++
Subjt:  MNHIRGWLQAKYYKRKNKHSSNLSQWSKFAMEILEKAEEKSRRHVVKPIARYEFDVEDEHLGGRVNLHARTCTCREFEYYKLSCSHVIAACTYRQIDYHT

Query:  LCSKVYHVDSLIDAYAQPIQPLGHESEWKRPPQFVDVEVLPLRRVPRVGRRPTLRIPSTGEVRHVRKCSRCGNRDHNRKT
        LC + Y  +S I AYA+PI P+GH S W   P+FV++ V P + VPRVGRR T RIPSTGEVR  RKC RCG   HNRKT
Subjt:  LCSKVYHVDSLIDAYAQPIQPLGHESEWKRPPQFVDVEVLPLRRVPRVGRRPTLRIPSTGEVRHVRKCSRCGNRDHNRKT
A0A6J1DLQ2 uncharacterized protein LOC1110221072.4e-4048.89Show/hide
Query:  MNHIRGWLQAKYYKRKNKHSSNLSQWSKFAMEILEKAEEKSRRHVVKPIARYEFDVEDEHLGGRVNLHARTCTCREFEYYKLSCSHVIAACTYRQIDYHT
        ++HIRG LQ  +Y+R+   SS  S  S +A E++ +A + +R H+V  I  + F+V D +L G V+L ++TCTCREF+Y+K+ CSH IAA   R I+ +T
Subjt:  MNHIRGWLQAKYYKRKNKHSSNLSQWSKFAMEILEKAEEKSRRHVVKPIARYEFDVEDEHLGGRVNLHARTCTCREFEYYKLSCSHVIAACTYRQIDYHT

Query:  LCSKVYHVDSLIDAYAQPIQPLGHESEWKRPPQFVDVEVLPLRRVPRVGRRPTLRIPSTGEVRHVRKCSRCGNRDHNRKT
        LC + Y V+S +   A+PI P+G  S WK  P FV+++V P ++V RVGRR T+RIP TGEVR  RKCSRCG   HN KT
Subjt:  LCSKVYHVDSLIDAYAQPIQPLGHESEWKRPPQFVDVEVLPLRRVPRVGRRPTLRIPSTGEVRHVRKCSRCGNRDHNRKT
A0A6J1DWF8 uncharacterized protein LOC1110251171.5e-3950.3Show/hide
Query:  YYKRKNKHSSNLSQWSKFAMEILEKAEEKSRRHVVKPIARYEFDVEDEHLGGRVNLHARTCTCREFEYYKLSCSHVIAACTYRQIDYHTLCSKVYHVDSL
        +Y+R+   SS  S  S +A E++ +A + SRRH+V  I ++ F+V D +L G V+L ++TCTCREF+Y+K+ CSH IAA   R I+ +TLC + Y V+S 
Subjt:  YYKRKNKHSSNLSQWSKFAMEILEKAEEKSRRHVVKPIARYEFDVEDEHLGGRVNLHARTCTCREFEYYKLSCSHVIAACTYRQIDYHTLCSKVYHVDSL

Query:  IDAYAQPIQPLGHESEWKRPPQFVDVEVLPLRRVPRVGRRPTLRIPSTGEVRHVRKCSRCGNRDHNRKT
        + A+A+PI  +G  + WK  P FV+++V P ++V RVGRR T+RIPSTGEVR  RKCSRCG   HNRKT
Subjt:  IDAYAQPIQPLGHESEWKRPPQFVDVEVLPLRRVPRVGRRPTLRIPSTGEVRHVRKCSRCGNRDHNRKT
A0A6J1DYC4 uncharacterized protein LOC1110256782.8e-4149.44Show/hide
Query:  MNHIRGWLQAKYYKRKNKHSSNLSQWSKFAMEILEKAEEKSRRHVVKPIARYEFDVEDEHLGGRVNLHARTCTCREFEYYKLSCSHVIAACTYRQIDYHT
        ++HIRG LQ  +Y R+   +S  +  S +A  +  +  + +RRHVV  I ++ F V D +L G V+L+A  C+CREF+Y+K+ CSH IAA T R I+ ++
Subjt:  MNHIRGWLQAKYYKRKNKHSSNLSQWSKFAMEILEKAEEKSRRHVVKPIARYEFDVEDEHLGGRVNLHARTCTCREFEYYKLSCSHVIAACTYRQIDYHT

Query:  LCSKVYHVDSLIDAYAQPIQPLGHESEWKRPPQFVDVEVLPLRRVPRVGRRPTLRIPSTGEVRHVRKCSRCGNRDHNRKT
        LC + Y  +S I AYA+PI P+GH S W   P+FV++ V P + VPRVGRR T+RIPSTGEVR  RKC RCG   HNRKT
Subjt:  LCSKVYHVDSLIDAYAQPIQPLGHESEWKRPPQFVDVEVLPLRRVPRVGRRPTLRIPSTGEVRHVRKCSRCGNRDHNRKT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49920.1 MuDR family transposase2.1e-0425.17Show/hide
Query:  WSKFAMEILEKAEEKSRRHV--VKPIARYEFDV-------------EDEHLGGRVNLHARTCTCREFEYYKLSCSHVIAACTYRQIDYHTLCSKVYHVDS
        +++  ME LE+ E  S   V  + P+ R  + V              ++   G V L+  TCTC EF+  K  C H +A C   +I+        Y V+ 
Subjt:  WSKFAMEILEKAEEKSRRHV--VKPIARYEFDV-------------EDEHLGGRVNLHARTCTCREFEYYKLSCSHVIAACTYRQIDYHTLCSKVYHVDS

Query:  LIDAYAQPIQPLGHESEWKRPPQFVDVEVLPLRRVPRVGRRPTLRIPSTGE
            Y+    P+   S W   P+   V  L    +P V   P  ++   G+
Subjt:  LIDAYAQPIQPLGHESEWKRPPQFVDVEVLPLRRVPRVGRRPTLRIPSTGE
AT1G64260.1 MuDR family transposase4.2e-0526.19Show/hide
Query:  LQAKYYKRKNKHSSNLSQWSKFAMEILEKAEE---KSRRHVVKPIARYEFDVED--EHLGGRVNLHARTCTCREFEYYKLSCSHVIAACTYRQIDYHTLC
        L++ + K  +   S+L++   +    ++K EE    S  +V+  + R  F V +  E     V L+  TCTCR+F+ YK  C H +A     +I+     
Subjt:  LQAKYYKRKNKHSSNLSQWSKFAMEILEKAEE---KSRRHVVKPIARYEFDVED--EHLGGRVNLHARTCTCREFEYYKLSCSHVIAACTYRQIDYHTLC

Query:  SKVYHVDSLIDAYAQPIQPLGHESEW
         + Y V+     YA    P+   + W
Subjt:  SKVYHVDSLIDAYAQPIQPLGHESEW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCATATCAGAGGGTGGCTTCAAGCAAAATACTACAAACGCAAGAATAAACACTCTAGTAACCTGAGCCAGTGGTCGAAGTTTGCAATGGAAATTTTGGAAAAAGC
AGAGGAGAAGTCACGGAGGCACGTGGTCAAACCTATTGCTCGATATGAGTTTGATGTCGAGGACGAACATTTGGGTGGACGTGTCAACCTTCATGCTAGAACATGCACAT
GTCGTGAGTTTGAGTATTACAAACTTTCATGCTCCCATGTGATCGCTGCATGCACTTATCGACAGATAGACTATCATACACTTTGTTCCAAAGTCTACCATGTGGACTCT
TTGATAGATGCATATGCACAACCCATACAACCCCTTGGACATGAGTCGGAGTGGAAGAGGCCACCTCAATTCGTCGATGTGGAAGTCTTGCCTCTTCGAAGAGTGCCTAG
AGTTGGTCGTCGTCCGACGTTGAGAATACCGTCTACGGGAGAAGTGCGACATGTCCGCAAATGCAGCCGGTGCGGGAATAGGGATCATAACAGAAAAACATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCATATCAGAGGGTGGCTTCAAGCAAAATACTACAAACGCAAGAATAAACACTCTAGTAACCTGAGCCAGTGGTCGAAGTTTGCAATGGAAATTTTGGAAAAAGC
AGAGGAGAAGTCACGGAGGCACGTGGTCAAACCTATTGCTCGATATGAGTTTGATGTCGAGGACGAACATTTGGGTGGACGTGTCAACCTTCATGCTAGAACATGCACAT
GTCGTGAGTTTGAGTATTACAAACTTTCATGCTCCCATGTGATCGCTGCATGCACTTATCGACAGATAGACTATCATACACTTTGTTCCAAAGTCTACCATGTGGACTCT
TTGATAGATGCATATGCACAACCCATACAACCCCTTGGACATGAGTCGGAGTGGAAGAGGCCACCTCAATTCGTCGATGTGGAAGTCTTGCCTCTTCGAAGAGTGCCTAG
AGTTGGTCGTCGTCCGACGTTGAGAATACCGTCTACGGGAGAAGTGCGACATGTCCGCAAATGCAGCCGGTGCGGGAATAGGGATCATAACAGAAAAACATGA
Protein sequenceShow/hide protein sequence
MNHIRGWLQAKYYKRKNKHSSNLSQWSKFAMEILEKAEEKSRRHVVKPIARYEFDVEDEHLGGRVNLHARTCTCREFEYYKLSCSHVIAACTYRQIDYHTLCSKVYHVDS
LIDAYAQPIQPLGHESEWKRPPQFVDVEVLPLRRVPRVGRRPTLRIPSTGEVRHVRKCSRCGNRDHNRKT