| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0047995.1 retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa] | 4.0e-160 | 40.98 | Show/hide |
Query: LPESEIKETKEIAFSTIILYLADNVLRQVHEANTAEEVWKQLDKIYLTKSLTNKLYIKERFFGFKMDPNKDLEHNLDEYNRIVLDLANIDEKMSDENRAI
+ ESE ++ E+A+ TI+LYL+D VLR V EA T E+WK+L+ +YLTKSL NK+YIKE+FFG+KMD +K LE NLDE+ +IV+DL NI EKMSDEN+A+
Subjt: LPESEIKETKEIAFSTIILYLADNVLRQVHEANTAEEVWKQLDKIYLTKSLTNKLYIKERFFGFKMDPNKDLEHNLDEYNRIVLDLANIDEKMSDENRAI
Query: ILLNSLPESYNEVKSAIRYDRDSLSMDIVLSALRSRDLELKKGKSKESEALFTRGRTEKKSSRNNSRT--------------------------------
ILLNSLPE+Y EVK+AI+Y DSL+M IVL AL++R+LE+KK + K+ E L RGR+EKKS + R+
Subjt: ILLNSLPESYNEVKSAIRYDRDSLSMDIVLSALRSRDLELKKGKSKESEALFTRGRTEKKSSRNNSRT--------------------------------
Query: -------------------------------EVLTVLEGNFDSEWILDSGCSFHMTPNKHWFLNFEEIDGGKVLLGNH----------------------
EVL V + WI+DSGC+FHMTP++ + NF+++DGGKVLLG++
Subjt: -------------------------------EVLTVLEGNFDSEWILDSGCSFHMTPNKHWFLNFEEIDGGKVLLGNH----------------------
Query: -----------------------------QNNI-KIVKGAIVKAKGILHNGLYVLSANTMVGTTAVASERDQKQTKLWHARLGHMSERGLRELSKQGLL-
+N + K+ KG++VK +G L +GLYVL T+ G+ A+AS + + LWH RL H+SERGL+ LS+QGLL
Subjt: -----------------------------QNNI-KIVKGAIVKAKGILHNGLYVLSANTMVGTTAVASERDQKQTKLWHARLGHMSERGLRELSKQGLL-
Query: -----------------------------------------------------------VEDL-------------------------VEKQTERKLKCL
++D VE QT RK+K L
Subjt: -----------------------------------------------------------VEDL-------------------------VEKQTERKLKCL
Query: RTDNGLEFLSNEFKEFCKLTEGIIRHLTVRGTPQQNGLAERMNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAIDFKTPMEKWSNHPPDLS
RTDNGLEF++N+F +FCK +EGI RH TV TPQQNGLAER NRT++E+ RCL++NA LP KFWGEA TA YL+NRSPSTA++ KTP E W+ P L
Subjt: RTDNGLEFLSNEFKEFCKLTEGIIRHLTVRGTPQQNGLAERMNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAIDFKTPMEKWSNHPPDLS
Query: NLRTFGCIAYAHSKEGKLDNRAKKCLFLGYQSGIKGYRLWCIEKGEEKCIISRDVTFDESVIAW-EKNQSETETNSEKNKSFEMELELASIQTPT---EN
+LR FGC AYAH K+GKL+ RA KC+F+GY G+KGY+LWCIEKG KCIISRDVTF+E+ + + K Q + +T E+ +AS P+ +N
Subjt: NLRTFGCIAYAHSKEGKLDNRAKKCLFLGYQSGIKGYRLWCIEKGEEKCIISRDVTFDESVIAW-EKNQSETETNSEKNKSFEMELELASIQTPT---EN
Query: QPAETDVRVEEGAETQ---AETQAENI----------PPEPDSLQNYNLTRDRQRREIRRPARYASADIVHYALFTEMNSIDEEPLTYHEAINSINSDKW
QP +E+ +++ ++Q E I + LQNY LTRDR +RE P RY AD+V YAL +SI+ EPLT+ EAI S + +W
Subjt: QPAETDVRVEEGAETQ---AETQAENI----------PPEPDSLQNYNLTRDRQRREIRRPARYASADIVHYALFTEMNSIDEEPLTYHEAINSINSDKW
Query: KEAMQEEMNSLLKNNTWELVDRPSNKILVGCKWIYKVKQSVDPSQPKRYKARLV
K+AM+EE+ SL KN TW LV +P N+ L+ KWIYK+K + RYKARL+
Subjt: KEAMQEEMNSLLKNNTWELVDRPSNKILVGCKWIYKVKQSVDPSQPKRYKARLV
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| KAA0050719.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 8.6e-179 | 42.73 | Show/hide |
Query: LPESEIKETKEIAFSTIILYLADNVLRQVHEANTAEEVWKQLDKIYLTKSLTNKLYIKERFFGFKMDPNKDLEHNLDEYNRIVLDLANIDEKMSDENRAI
+ ESE ++ E+A+STI+LYL+D VLR V EA T E+WK+L+ +YLTKSL NK+YIKE+FFG+KMD +K LE NLDE+ +IV+DL NI EKMSDEN+A+
Subjt: LPESEIKETKEIAFSTIILYLADNVLRQVHEANTAEEVWKQLDKIYLTKSLTNKLYIKERFFGFKMDPNKDLEHNLDEYNRIVLDLANIDEKMSDENRAI
Query: ILLNSLPESYNEVKSAIRYDRDSLSMDIVLSALRSRDLELKKGKSKESEALFTRGRTEKKSSRNNSRT--------------------------------
ILLNSLPE+Y EVK+AI+Y RDSL+M IVL AL++R+LE+KK + K+ E L RGR+EKKS + R+
Subjt: ILLNSLPESYNEVKSAIRYDRDSLSMDIVLSALRSRDLELKKGKSKESEALFTRGRTEKKSSRNNSRT--------------------------------
Query: -------------------------------EVLTVLEGNFDSEWILDSGCSFHMTPNKHWFLNFEEIDGGKVLLGNH----------------------
EVL V + WI+DSGC+FHMTP++ + NF+++DGGKVLLG++
Subjt: -------------------------------EVLTVLEGNFDSEWILDSGCSFHMTPNKHWFLNFEEIDGGKVLLGNH----------------------
Query: -----------------------------QNNI-KIVKGAIVKAKGILHNGLYVLSANTMVGTTAVASERDQKQTKLWHARLGHMSERGLRELSKQGLL-
+N + K+ KG++VK +G L +GLYVL T+ G+ A+AS + + LWH RL H+SERGL+ LS+QGLL
Subjt: -----------------------------QNNI-KIVKGAIVKAKGILHNGLYVLSANTMVGTTAVASERDQKQTKLWHARLGHMSERGLRELSKQGLL-
Query: -----------------------------------------------------------VEDL-------------------------VEKQTERKLKCL
++D VE QT RK+K L
Subjt: -----------------------------------------------------------VEDL-------------------------VEKQTERKLKCL
Query: RTDNGLEFLSNEFKEFCKLTEGIIRHLTVRGTPQQNGLAERMNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAIDFKTPMEKWSNHPPDLS
RTDNGLEF++N+F +FCK +EGI RH TV TPQQNGLAER NRT++E+ RCL++NA LP KFWGEA TA YL+NRSPSTA++ KTP E W+ P L
Subjt: RTDNGLEFLSNEFKEFCKLTEGIIRHLTVRGTPQQNGLAERMNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAIDFKTPMEKWSNHPPDLS
Query: NLRTFGCIAYAHSKEGKLDNRAKKCLFLGYQSGIKGYRLWCIEKGEEKCIISRDVTFDESVIAW-----EKNQ------SETETNSEKNKSFEMELELAS
+LR FGC AYAH K+GKL+ RA KC+F+GY G+KGY+LWCIEKG KCIISRDVTF+E+ + + +K Q +E SE S +++ +
Subjt: NLRTFGCIAYAHSKEGKLDNRAKKCLFLGYQSGIKGYRLWCIEKGEEKCIISRDVTFDESVIAW-----EKNQ------SETETNSEKNKSFEMELELAS
Query: IQTPTENQPAETD--------VRVEEGAETQAETQAENIPPEPDSLQNYNLTRDRQRREIRRPARYASADIVHYALFTEMNSIDEEPLTYHEAINSINSD
+ + Q +E D + ++EGA + E+ + N LQNY LTRDR +RE P RY AD+V YAL +SI+ EPLT+ EAI S +
Subjt: IQTPTENQPAETD--------VRVEEGAETQAETQAENIPPEPDSLQNYNLTRDRQRREIRRPARYASADIVHYALFTEMNSIDEEPLTYHEAINSINSD
Query: KWKEAMQEEMNSLLKNNTWELVDRPSNKILVGCKWIYKVKQSVDPSQPKRYKARLVAKGYTQKEGVDYGEIFSPVVRHSSIRTLLSL
+WK+AM+EE+ SL KN TW LV +P N+ L+ KWIYK+K + RYKARLVAKGYTQKEGVD+ EIFSPVVRHSSIR +LS+
Subjt: KWKEAMQEEMNSLLKNNTWELVDRPSNKILVGCKWIYKVKQSVDPSQPKRYKARLVAKGYTQKEGVDYGEIFSPVVRHSSIRTLLSL
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| PKU72844.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatum] | 2.2e-150 | 38.39 | Show/hide |
Query: LPESEIKET---------KEIAFSTIILYLADNVLRQVHEANTAEEVWKQLDKIYLTKSLTNKLYIKERFFGFKMDPNKDLEHNLDEYNRIVLDLANIDE
LPESE+ T ++ AFS+IIL LAD VLR+V T E+WK+L+++Y K+L N++Y+KE+FFG+KMD K ++ NLDE+N+++LDL N++
Subjt: LPESEIKET---------KEIAFSTIILYLADNVLRQVHEANTAEEVWKQLDKIYLTKSLTNKLYIKERFFGFKMDPNKDLEHNLDEYNRIVLDLANIDE
Query: KMSDENRAIILLNSLPESYNEVKSAIRYDRDSLSMDIVLSALRSRDLELK-KGKSKESEALFTRGRTEKKSS-----RNNSRTEVLT-------------
K+ DE++AIILLNSLP+S K ++Y R+++++D V +AL S+ L++K K+ E L RGR++K+ + ++ SR++ +
Subjt: KMSDENRAIILLNSLPESYNEVKSAIRYDRDSLSMDIVLSALRSRDLELK-KGKSKESEALFTRGRTEKKSS-----RNNSRTEVLT-------------
Query: -------------------------VLEGNFDSEWIL---------DSGCSF----------------------HMTPNKHWFLNFEEIDGGKVLLGNHQ
++ N+DS +L + C H+ K ++ +D + + +
Subjt: -------------------------VLEGNFDSEWIL---------DSGCSF----------------------HMTPNKHWFLNFEEIDGGKVLLGNHQ
Query: NNIKIVKGAIVKAKGILHNGLYVLSANTMVGTTAVASERDQKQTKLWHARLGHMSERGLRELSKQGLLVED-----------------------------
++I KGA+V KGI NGLYVL T+VG T V ++++ +TKLWH RLGH+S+RGL EL KQGL D
Subjt: NNIKIVKGAIVKAKGILHNGLYVLSANTMVGTTAVASERDQKQTKLWHARLGHMSERGLRELSKQGLLVED-----------------------------
Query: --------------------------------------------------------LVEKQTERKLKCLRTDNGLEFLSNEFKEFCKLTEGIIRHLTVRG
+VE Q RKLK LRTDNGLEF + F +FC GI+RH TV
Subjt: --------------------------------------------------------LVEKQTERKLKCLRTDNGLEFLSNEFKEFCKLTEGIIRHLTVRG
Query: TPQQNGLAERMNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAIDFKTPMEKWSNHPPDLSNLRTFGCIAYAHSKEGKLDNRAKKCLFLGYQ
TPQQNGLAERMNRTLL+++RCL+ ++ L K FWGEAL TA YLVNR+PS+AI+FKTP E W PP L++LR FGC+AY H +GKL+ R+ KC+FLGY
Subjt: TPQQNGLAERMNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAIDFKTPMEKWSNHPPDLSNLRTFGCIAYAHSKEGKLDNRAKKCLFLGYQ
Query: SGIKGYRLWCIEKGEEKCIISRDVTFDESVIAWEKNQSETET-----NSEKNKS-FEMELELASIQTPTENQPAETDVRVEEGAETQAETQAENIP-PEP
+G+KGYRLW + K IISRDV F+E+ + +++++ T NS+ NK +E E+E S EN Q T+ EN P P
Subjt: SGIKGYRLWCIEKGEEKCIISRDVTFDESVIAWEKNQSETET-----NSEKNKS-FEMELELASIQTPTENQPAETDVRVEEGAETQAETQAENIP-PEP
Query: DSLQNYNLTRDRQRREIRRPARYASADIVHYALFTEMNSIDEEPLTYHEAINSINSDKWKEAMQEEMNSLLKNNTWELVDRPSNKILVGCKWIYKVKQSV
++ +Y L+RDR+RR I+ P++Y A+++ YAL + + D EP++Y EA++ +S+ W +AMQ+E +SL+KNNTW LV++ N+ +V CKWIYK+K+
Subjt: DSLQNYNLTRDRQRREIRRPARYASADIVHYALFTEMNSIDEEPLTYHEAINSINSDKWKEAMQEEMNSLLKNNTWELVDRPSNKILVGCKWIYKVKQSV
Query: DPSQPKRYKARLVAKGYTQKEGVDYGEIFSPVVRHSSIRTLLSL
++P RYKARLVA+GYTQKEG+DY EIFSPVV+H+SIR L+ L
Subjt: DPSQPKRYKARLVAKGYTQKEGVDYGEIFSPVVRHSSIRTLLSL
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| RVW99173.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.9e-149 | 40.17 | Show/hide |
Query: AKFEVERFDGR-----------------GLPE---------SEIKETKEI-----AFSTIILYLADNVLRQVHEANTAEEVWKQLDKIYLTKSLTNKLYI
AKF+VERF G+ GL + S ++E K+I A S IIL L D VLR+V +A + EVW +L+ +Y+TKSL N+L+
Subjt: AKFEVERFDGR-----------------GLPE---------SEIKETKEI-----AFSTIILYLADNVLRQVHEANTAEEVWKQLDKIYLTKSLTNKLYI
Query: KERFFGFKMDPNKDLEHNLDEYNRIVLDLANIDEKMSDENRAIILLNSLPESYNEVKSAIRYDRDSLSMDIVLSALRSRDLELKKGK----SKE----SE
K + + FKM P +E +LD +N+I+LDL NID +SDE++AI+LL SL Y +K AI Y RDSL+ D ++ + KK K KE +
Subjt: KERFFGFKMDPNKDLEHNLDEYNRIVLDLANIDEKMSDENRAIILLNSLPESYNEVKSAIRYDRDSLSMDIVLSALRSRDLELKKGK----SKE----SE
Query: ALFTRGRTEKKSSR---------NNSRTEVLTVLEGNFDSEWILDSGCSFHMTPNKHWFLNFEEIDGGKVLLGNHQ------------------------
R T KK+ EVL V E + EWILDSGCSFHM P K WF +F+E DGG VLLGN++
Subjt: ALFTRGRTEKKSSR---------NNSRTEVLTVLEGNFDSEWILDSGCSFHMTPNKHWFLNFEEIDGGKVLLGNHQ------------------------
Query: ----------------------------NNIKIVKGAIVKAKGILHNGLYVLSANTMVGTTAVASERDQKQTKLWHARLGHMSERGLRELSKQGLL----
N++++ +G++ K + NGLY L T++ + + D TKLWH RLGHMS +GL+EL KQG+L
Subjt: ----------------------------NNIKIVKGAIVKAKGILHNGLYVLSANTMVGTTAVASERDQKQTKLWHARLGHMSERGLRELSKQGLL----
Query: --------------------VEDLVEKQTE---------------------RKLKCLRTDNGLEFLSNEFKEFCKLTEGIIRHLTVRGTPQQNGLAERMN
+ + E Q + RK+K LRTDNGLEFLSN+F FC+ EGI H TVR TPQQNGLAERMN
Subjt: --------------------VEDLVEKQTE---------------------RKLKCLRTDNGLEFLSNEFKEFCKLTEGIIRHLTVRGTPQQNGLAERMN
Query: RTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAIDFKTPMEKWSNHPPDLSNLRTFGCIAYAHSKEGKLDNRAKKCLFLGYQSGIKGYRLWCIE
RT+LE++RC++S++ L K FW EA T +L+NRSPS+A+ FKTP EKW+ + +L+ FGC AY H+K KL+ RA KC+FLGY G+KGY+LW
Subjt: RTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAIDFKTPMEKWSNHPPDLSNLRTFGCIAYAHSKEGKLDNRAKKCLFLGYQSGIKGYRLWCIE
Query: KGEEKCIISRDVTFDESVIAWEKNQSETETNSEKNKSFEMELELASIQTPTENQPAETDVRVEEGAETQAETQAENIPPEPDSLQNYNLTRDRQRREIRR
+G+ CIISRDVTF+E ++ + + E + + FE+E E QP ++ + A+ + + +N P + L++YNL RDRQ+R+++
Subjt: KGEEKCIISRDVTFDESVIAWEKNQSETETNSEKNKSFEMELELASIQTPTENQPAETDVRVEEGAETQAETQAENIPPEPDSLQNYNLTRDRQRREIRR
Query: PARYASADIVHYALFTEMNSIDEEPLTYHEAINSINSDKWKEAMQEEMNSLLKNNTWELVDRPSNKILVGCKWIYKVKQSVDPSQPKRYKARLVAKGYTQ
P RY ++ +AL +D EP TY EAINS D+W +A++EEM+SL KN TWELV +P ++ +VG KW++K KQ ++ RYKARLVAKG++Q
Subjt: PARYASADIVHYALFTEMNSIDEEPLTYHEAINSINSDKWKEAMQEEMNSLLKNNTWELVDRPSNKILVGCKWIYKVKQSVDPSQPKRYKARLVAKGYTQ
Query: KEGVDYGEIFSPVVRHSSIRTLLS
KEGVDY EIFSPVV+HSSIR LL+
Subjt: KEGVDYGEIFSPVVRHSSIRTLLS
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| TYK25306.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 8.6e-179 | 42.73 | Show/hide |
Query: LPESEIKETKEIAFSTIILYLADNVLRQVHEANTAEEVWKQLDKIYLTKSLTNKLYIKERFFGFKMDPNKDLEHNLDEYNRIVLDLANIDEKMSDENRAI
+ ESE ++ E+A+STI+LYL+D VLR V EA T E+WK+L+ +YLTKSL NK+YIKE+FFG+KMD +K LE NLDE+ +IV+DL NI EKMSDEN+A+
Subjt: LPESEIKETKEIAFSTIILYLADNVLRQVHEANTAEEVWKQLDKIYLTKSLTNKLYIKERFFGFKMDPNKDLEHNLDEYNRIVLDLANIDEKMSDENRAI
Query: ILLNSLPESYNEVKSAIRYDRDSLSMDIVLSALRSRDLELKKGKSKESEALFTRGRTEKKSSRNNSRT--------------------------------
ILLNSLPE+Y EVK+AI+Y RDSL+M IVL AL++R+LE+KK + K+ E L RGR+EKKS + R+
Subjt: ILLNSLPESYNEVKSAIRYDRDSLSMDIVLSALRSRDLELKKGKSKESEALFTRGRTEKKSSRNNSRT--------------------------------
Query: -------------------------------EVLTVLEGNFDSEWILDSGCSFHMTPNKHWFLNFEEIDGGKVLLGNH----------------------
EVL V + WI+DSGC+FHMTP++ + NF+++DGGKVLLG++
Subjt: -------------------------------EVLTVLEGNFDSEWILDSGCSFHMTPNKHWFLNFEEIDGGKVLLGNH----------------------
Query: -----------------------------QNNI-KIVKGAIVKAKGILHNGLYVLSANTMVGTTAVASERDQKQTKLWHARLGHMSERGLRELSKQGLL-
+N + K+ KG++VK +G L +GLYVL T+ G+ A+AS + + LWH RL H+SERGL+ LS+QGLL
Subjt: -----------------------------QNNI-KIVKGAIVKAKGILHNGLYVLSANTMVGTTAVASERDQKQTKLWHARLGHMSERGLRELSKQGLL-
Query: -----------------------------------------------------------VEDL-------------------------VEKQTERKLKCL
++D VE QT RK+K L
Subjt: -----------------------------------------------------------VEDL-------------------------VEKQTERKLKCL
Query: RTDNGLEFLSNEFKEFCKLTEGIIRHLTVRGTPQQNGLAERMNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAIDFKTPMEKWSNHPPDLS
RTDNGLEF++N+F +FCK +EGI RH TV TPQQNGLAER NRT++E+ RCL++NA LP KFWGEA TA YL+NRSPSTA++ KTP E W+ P L
Subjt: RTDNGLEFLSNEFKEFCKLTEGIIRHLTVRGTPQQNGLAERMNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAIDFKTPMEKWSNHPPDLS
Query: NLRTFGCIAYAHSKEGKLDNRAKKCLFLGYQSGIKGYRLWCIEKGEEKCIISRDVTFDESVIAW-----EKNQ------SETETNSEKNKSFEMELELAS
+LR FGC AYAH K+GKL+ RA KC+F+GY G+KGY+LWCIEKG KCIISRDVTF+E+ + + +K Q +E SE S +++ +
Subjt: NLRTFGCIAYAHSKEGKLDNRAKKCLFLGYQSGIKGYRLWCIEKGEEKCIISRDVTFDESVIAW-----EKNQ------SETETNSEKNKSFEMELELAS
Query: IQTPTENQPAETD--------VRVEEGAETQAETQAENIPPEPDSLQNYNLTRDRQRREIRRPARYASADIVHYALFTEMNSIDEEPLTYHEAINSINSD
+ + Q +E D + ++EGA + E+ + N LQNY LTRDR +RE P RY AD+V YAL +SI+ EPLT+ EAI S +
Subjt: IQTPTENQPAETD--------VRVEEGAETQAETQAENIPPEPDSLQNYNLTRDRQRREIRRPARYASADIVHYALFTEMNSIDEEPLTYHEAINSINSD
Query: KWKEAMQEEMNSLLKNNTWELVDRPSNKILVGCKWIYKVKQSVDPSQPKRYKARLVAKGYTQKEGVDYGEIFSPVVRHSSIRTLLSL
+WK+AM+EE+ SL KN TW LV +P N+ L+ KWIYK+K + RYKARLVAKGYTQKEGVD+ EIFSPVVRHSSIR +LS+
Subjt: KWKEAMQEEMNSLLKNNTWELVDRPSNKILVGCKWIYKVKQSVDPSQPKRYKARLVAKGYTQKEGVDYGEIFSPVVRHSSIRTLLSL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2I0WB13 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-150 | 38.39 | Show/hide |
Query: LPESEIKET---------KEIAFSTIILYLADNVLRQVHEANTAEEVWKQLDKIYLTKSLTNKLYIKERFFGFKMDPNKDLEHNLDEYNRIVLDLANIDE
LPESE+ T ++ AFS+IIL LAD VLR+V T E+WK+L+++Y K+L N++Y+KE+FFG+KMD K ++ NLDE+N+++LDL N++
Subjt: LPESEIKET---------KEIAFSTIILYLADNVLRQVHEANTAEEVWKQLDKIYLTKSLTNKLYIKERFFGFKMDPNKDLEHNLDEYNRIVLDLANIDE
Query: KMSDENRAIILLNSLPESYNEVKSAIRYDRDSLSMDIVLSALRSRDLELK-KGKSKESEALFTRGRTEKKSS-----RNNSRTEVLT-------------
K+ DE++AIILLNSLP+S K ++Y R+++++D V +AL S+ L++K K+ E L RGR++K+ + ++ SR++ +
Subjt: KMSDENRAIILLNSLPESYNEVKSAIRYDRDSLSMDIVLSALRSRDLELK-KGKSKESEALFTRGRTEKKSS-----RNNSRTEVLT-------------
Query: -------------------------VLEGNFDSEWIL---------DSGCSF----------------------HMTPNKHWFLNFEEIDGGKVLLGNHQ
++ N+DS +L + C H+ K ++ +D + + +
Subjt: -------------------------VLEGNFDSEWIL---------DSGCSF----------------------HMTPNKHWFLNFEEIDGGKVLLGNHQ
Query: NNIKIVKGAIVKAKGILHNGLYVLSANTMVGTTAVASERDQKQTKLWHARLGHMSERGLRELSKQGLLVED-----------------------------
++I KGA+V KGI NGLYVL T+VG T V ++++ +TKLWH RLGH+S+RGL EL KQGL D
Subjt: NNIKIVKGAIVKAKGILHNGLYVLSANTMVGTTAVASERDQKQTKLWHARLGHMSERGLRELSKQGLLVED-----------------------------
Query: --------------------------------------------------------LVEKQTERKLKCLRTDNGLEFLSNEFKEFCKLTEGIIRHLTVRG
+VE Q RKLK LRTDNGLEF + F +FC GI+RH TV
Subjt: --------------------------------------------------------LVEKQTERKLKCLRTDNGLEFLSNEFKEFCKLTEGIIRHLTVRG
Query: TPQQNGLAERMNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAIDFKTPMEKWSNHPPDLSNLRTFGCIAYAHSKEGKLDNRAKKCLFLGYQ
TPQQNGLAERMNRTLL+++RCL+ ++ L K FWGEAL TA YLVNR+PS+AI+FKTP E W PP L++LR FGC+AY H +GKL+ R+ KC+FLGY
Subjt: TPQQNGLAERMNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAIDFKTPMEKWSNHPPDLSNLRTFGCIAYAHSKEGKLDNRAKKCLFLGYQ
Query: SGIKGYRLWCIEKGEEKCIISRDVTFDESVIAWEKNQSETET-----NSEKNKS-FEMELELASIQTPTENQPAETDVRVEEGAETQAETQAENIP-PEP
+G+KGYRLW + K IISRDV F+E+ + +++++ T NS+ NK +E E+E S EN Q T+ EN P P
Subjt: SGIKGYRLWCIEKGEEKCIISRDVTFDESVIAWEKNQSETET-----NSEKNKS-FEMELELASIQTPTENQPAETDVRVEEGAETQAETQAENIP-PEP
Query: DSLQNYNLTRDRQRREIRRPARYASADIVHYALFTEMNSIDEEPLTYHEAINSINSDKWKEAMQEEMNSLLKNNTWELVDRPSNKILVGCKWIYKVKQSV
++ +Y L+RDR+RR I+ P++Y A+++ YAL + + D EP++Y EA++ +S+ W +AMQ+E +SL+KNNTW LV++ N+ +V CKWIYK+K+
Subjt: DSLQNYNLTRDRQRREIRRPARYASADIVHYALFTEMNSIDEEPLTYHEAINSINSDKWKEAMQEEMNSLLKNNTWELVDRPSNKILVGCKWIYKVKQSV
Query: DPSQPKRYKARLVAKGYTQKEGVDYGEIFSPVVRHSSIRTLLSL
++P RYKARLVA+GYTQKEG+DY EIFSPVV+H+SIR L+ L
Subjt: DPSQPKRYKARLVAKGYTQKEGVDYGEIFSPVVRHSSIRTLLSL
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| A0A438IR25 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.1e-150 | 40.17 | Show/hide |
Query: AKFEVERFDGR-----------------GLPE---------SEIKETKEI-----AFSTIILYLADNVLRQVHEANTAEEVWKQLDKIYLTKSLTNKLYI
AKF+VERF G+ GL + S ++E K+I A S IIL L D VLR+V +A + EVW +L+ +Y+TKSL N+L+
Subjt: AKFEVERFDGR-----------------GLPE---------SEIKETKEI-----AFSTIILYLADNVLRQVHEANTAEEVWKQLDKIYLTKSLTNKLYI
Query: KERFFGFKMDPNKDLEHNLDEYNRIVLDLANIDEKMSDENRAIILLNSLPESYNEVKSAIRYDRDSLSMDIVLSALRSRDLELKKGK----SKE----SE
K + + FKM P +E +LD +N+I+LDL NID +SDE++AI+LL SL Y +K AI Y RDSL+ D ++ + KK K KE +
Subjt: KERFFGFKMDPNKDLEHNLDEYNRIVLDLANIDEKMSDENRAIILLNSLPESYNEVKSAIRYDRDSLSMDIVLSALRSRDLELKKGK----SKE----SE
Query: ALFTRGRTEKKSSR---------NNSRTEVLTVLEGNFDSEWILDSGCSFHMTPNKHWFLNFEEIDGGKVLLGNHQ------------------------
R T KK+ EVL V E + EWILDSGCSFHM P K WF +F+E DGG VLLGN++
Subjt: ALFTRGRTEKKSSR---------NNSRTEVLTVLEGNFDSEWILDSGCSFHMTPNKHWFLNFEEIDGGKVLLGNHQ------------------------
Query: ----------------------------NNIKIVKGAIVKAKGILHNGLYVLSANTMVGTTAVASERDQKQTKLWHARLGHMSERGLRELSKQGLL----
N++++ +G++ K + NGLY L T++ + + D TKLWH RLGHMS +GL+EL KQG+L
Subjt: ----------------------------NNIKIVKGAIVKAKGILHNGLYVLSANTMVGTTAVASERDQKQTKLWHARLGHMSERGLRELSKQGLL----
Query: --------------------VEDLVEKQTE---------------------RKLKCLRTDNGLEFLSNEFKEFCKLTEGIIRHLTVRGTPQQNGLAERMN
+ + E Q + RK+K LRTDNGLEFLSN+F FC+ EGI H TVR TPQQNGLAERMN
Subjt: --------------------VEDLVEKQTE---------------------RKLKCLRTDNGLEFLSNEFKEFCKLTEGIIRHLTVRGTPQQNGLAERMN
Query: RTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAIDFKTPMEKWSNHPPDLSNLRTFGCIAYAHSKEGKLDNRAKKCLFLGYQSGIKGYRLWCIE
RT+LE++RC++S++ L K FW EA T +L+NRSPS+A+ FKTP EKW+ + +L+ FGC AY H+K KL+ RA KC+FLGY G+KGY+LW
Subjt: RTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAIDFKTPMEKWSNHPPDLSNLRTFGCIAYAHSKEGKLDNRAKKCLFLGYQSGIKGYRLWCIE
Query: KGEEKCIISRDVTFDESVIAWEKNQSETETNSEKNKSFEMELELASIQTPTENQPAETDVRVEEGAETQAETQAENIPPEPDSLQNYNLTRDRQRREIRR
+G+ CIISRDVTF+E ++ + + E + + FE+E E QP ++ + A+ + + +N P + L++YNL RDRQ+R+++
Subjt: KGEEKCIISRDVTFDESVIAWEKNQSETETNSEKNKSFEMELELASIQTPTENQPAETDVRVEEGAETQAETQAENIPPEPDSLQNYNLTRDRQRREIRR
Query: PARYASADIVHYALFTEMNSIDEEPLTYHEAINSINSDKWKEAMQEEMNSLLKNNTWELVDRPSNKILVGCKWIYKVKQSVDPSQPKRYKARLVAKGYTQ
P RY ++ +AL +D EP TY EAINS D+W +A++EEM+SL KN TWELV +P ++ +VG KW++K KQ ++ RYKARLVAKG++Q
Subjt: PARYASADIVHYALFTEMNSIDEEPLTYHEAINSINSDKWKEAMQEEMNSLLKNNTWELVDRPSNKILVGCKWIYKVKQSVDPSQPKRYKARLVAKGYTQ
Query: KEGVDYGEIFSPVVRHSSIRTLLS
KEGVDY EIFSPVV+HSSIR LL+
Subjt: KEGVDYGEIFSPVVRHSSIRTLLS
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| A0A5A7U2U7 Retrotransposon protein, putative, Ty1-copia sub-class | 1.9e-160 | 40.98 | Show/hide |
Query: LPESEIKETKEIAFSTIILYLADNVLRQVHEANTAEEVWKQLDKIYLTKSLTNKLYIKERFFGFKMDPNKDLEHNLDEYNRIVLDLANIDEKMSDENRAI
+ ESE ++ E+A+ TI+LYL+D VLR V EA T E+WK+L+ +YLTKSL NK+YIKE+FFG+KMD +K LE NLDE+ +IV+DL NI EKMSDEN+A+
Subjt: LPESEIKETKEIAFSTIILYLADNVLRQVHEANTAEEVWKQLDKIYLTKSLTNKLYIKERFFGFKMDPNKDLEHNLDEYNRIVLDLANIDEKMSDENRAI
Query: ILLNSLPESYNEVKSAIRYDRDSLSMDIVLSALRSRDLELKKGKSKESEALFTRGRTEKKSSRNNSRT--------------------------------
ILLNSLPE+Y EVK+AI+Y DSL+M IVL AL++R+LE+KK + K+ E L RGR+EKKS + R+
Subjt: ILLNSLPESYNEVKSAIRYDRDSLSMDIVLSALRSRDLELKKGKSKESEALFTRGRTEKKSSRNNSRT--------------------------------
Query: -------------------------------EVLTVLEGNFDSEWILDSGCSFHMTPNKHWFLNFEEIDGGKVLLGNH----------------------
EVL V + WI+DSGC+FHMTP++ + NF+++DGGKVLLG++
Subjt: -------------------------------EVLTVLEGNFDSEWILDSGCSFHMTPNKHWFLNFEEIDGGKVLLGNH----------------------
Query: -----------------------------QNNI-KIVKGAIVKAKGILHNGLYVLSANTMVGTTAVASERDQKQTKLWHARLGHMSERGLRELSKQGLL-
+N + K+ KG++VK +G L +GLYVL T+ G+ A+AS + + LWH RL H+SERGL+ LS+QGLL
Subjt: -----------------------------QNNI-KIVKGAIVKAKGILHNGLYVLSANTMVGTTAVASERDQKQTKLWHARLGHMSERGLRELSKQGLL-
Query: -----------------------------------------------------------VEDL-------------------------VEKQTERKLKCL
++D VE QT RK+K L
Subjt: -----------------------------------------------------------VEDL-------------------------VEKQTERKLKCL
Query: RTDNGLEFLSNEFKEFCKLTEGIIRHLTVRGTPQQNGLAERMNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAIDFKTPMEKWSNHPPDLS
RTDNGLEF++N+F +FCK +EGI RH TV TPQQNGLAER NRT++E+ RCL++NA LP KFWGEA TA YL+NRSPSTA++ KTP E W+ P L
Subjt: RTDNGLEFLSNEFKEFCKLTEGIIRHLTVRGTPQQNGLAERMNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAIDFKTPMEKWSNHPPDLS
Query: NLRTFGCIAYAHSKEGKLDNRAKKCLFLGYQSGIKGYRLWCIEKGEEKCIISRDVTFDESVIAW-EKNQSETETNSEKNKSFEMELELASIQTPT---EN
+LR FGC AYAH K+GKL+ RA KC+F+GY G+KGY+LWCIEKG KCIISRDVTF+E+ + + K Q + +T E+ +AS P+ +N
Subjt: NLRTFGCIAYAHSKEGKLDNRAKKCLFLGYQSGIKGYRLWCIEKGEEKCIISRDVTFDESVIAW-EKNQSETETNSEKNKSFEMELELASIQTPT---EN
Query: QPAETDVRVEEGAETQ---AETQAENI----------PPEPDSLQNYNLTRDRQRREIRRPARYASADIVHYALFTEMNSIDEEPLTYHEAINSINSDKW
QP +E+ +++ ++Q E I + LQNY LTRDR +RE P RY AD+V YAL +SI+ EPLT+ EAI S + +W
Subjt: QPAETDVRVEEGAETQ---AETQAENI----------PPEPDSLQNYNLTRDRQRREIRRPARYASADIVHYALFTEMNSIDEEPLTYHEAINSINSDKW
Query: KEAMQEEMNSLLKNNTWELVDRPSNKILVGCKWIYKVKQSVDPSQPKRYKARLV
K+AM+EE+ SL KN TW LV +P N+ L+ KWIYK+K + RYKARL+
Subjt: KEAMQEEMNSLLKNNTWELVDRPSNKILVGCKWIYKVKQSVDPSQPKRYKARLV
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| A0A5A7UB25 Putative gag-pol polyprotein | 4.2e-179 | 42.73 | Show/hide |
Query: LPESEIKETKEIAFSTIILYLADNVLRQVHEANTAEEVWKQLDKIYLTKSLTNKLYIKERFFGFKMDPNKDLEHNLDEYNRIVLDLANIDEKMSDENRAI
+ ESE ++ E+A+STI+LYL+D VLR V EA T E+WK+L+ +YLTKSL NK+YIKE+FFG+KMD +K LE NLDE+ +IV+DL NI EKMSDEN+A+
Subjt: LPESEIKETKEIAFSTIILYLADNVLRQVHEANTAEEVWKQLDKIYLTKSLTNKLYIKERFFGFKMDPNKDLEHNLDEYNRIVLDLANIDEKMSDENRAI
Query: ILLNSLPESYNEVKSAIRYDRDSLSMDIVLSALRSRDLELKKGKSKESEALFTRGRTEKKSSRNNSRT--------------------------------
ILLNSLPE+Y EVK+AI+Y RDSL+M IVL AL++R+LE+KK + K+ E L RGR+EKKS + R+
Subjt: ILLNSLPESYNEVKSAIRYDRDSLSMDIVLSALRSRDLELKKGKSKESEALFTRGRTEKKSSRNNSRT--------------------------------
Query: -------------------------------EVLTVLEGNFDSEWILDSGCSFHMTPNKHWFLNFEEIDGGKVLLGNH----------------------
EVL V + WI+DSGC+FHMTP++ + NF+++DGGKVLLG++
Subjt: -------------------------------EVLTVLEGNFDSEWILDSGCSFHMTPNKHWFLNFEEIDGGKVLLGNH----------------------
Query: -----------------------------QNNI-KIVKGAIVKAKGILHNGLYVLSANTMVGTTAVASERDQKQTKLWHARLGHMSERGLRELSKQGLL-
+N + K+ KG++VK +G L +GLYVL T+ G+ A+AS + + LWH RL H+SERGL+ LS+QGLL
Subjt: -----------------------------QNNI-KIVKGAIVKAKGILHNGLYVLSANTMVGTTAVASERDQKQTKLWHARLGHMSERGLRELSKQGLL-
Query: -----------------------------------------------------------VEDL-------------------------VEKQTERKLKCL
++D VE QT RK+K L
Subjt: -----------------------------------------------------------VEDL-------------------------VEKQTERKLKCL
Query: RTDNGLEFLSNEFKEFCKLTEGIIRHLTVRGTPQQNGLAERMNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAIDFKTPMEKWSNHPPDLS
RTDNGLEF++N+F +FCK +EGI RH TV TPQQNGLAER NRT++E+ RCL++NA LP KFWGEA TA YL+NRSPSTA++ KTP E W+ P L
Subjt: RTDNGLEFLSNEFKEFCKLTEGIIRHLTVRGTPQQNGLAERMNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAIDFKTPMEKWSNHPPDLS
Query: NLRTFGCIAYAHSKEGKLDNRAKKCLFLGYQSGIKGYRLWCIEKGEEKCIISRDVTFDESVIAW-----EKNQ------SETETNSEKNKSFEMELELAS
+LR FGC AYAH K+GKL+ RA KC+F+GY G+KGY+LWCIEKG KCIISRDVTF+E+ + + +K Q +E SE S +++ +
Subjt: NLRTFGCIAYAHSKEGKLDNRAKKCLFLGYQSGIKGYRLWCIEKGEEKCIISRDVTFDESVIAW-----EKNQ------SETETNSEKNKSFEMELELAS
Query: IQTPTENQPAETD--------VRVEEGAETQAETQAENIPPEPDSLQNYNLTRDRQRREIRRPARYASADIVHYALFTEMNSIDEEPLTYHEAINSINSD
+ + Q +E D + ++EGA + E+ + N LQNY LTRDR +RE P RY AD+V YAL +SI+ EPLT+ EAI S +
Subjt: IQTPTENQPAETD--------VRVEEGAETQAETQAENIPPEPDSLQNYNLTRDRQRREIRRPARYASADIVHYALFTEMNSIDEEPLTYHEAINSINSD
Query: KWKEAMQEEMNSLLKNNTWELVDRPSNKILVGCKWIYKVKQSVDPSQPKRYKARLVAKGYTQKEGVDYGEIFSPVVRHSSIRTLLSL
+WK+AM+EE+ SL KN TW LV +P N+ L+ KWIYK+K + RYKARLVAKGYTQKEGVD+ EIFSPVVRHSSIR +LS+
Subjt: KWKEAMQEEMNSLLKNNTWELVDRPSNKILVGCKWIYKVKQSVDPSQPKRYKARLVAKGYTQKEGVDYGEIFSPVVRHSSIRTLLSL
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| A0A5D3DNU1 Putative gag-pol polyprotein | 4.2e-179 | 42.73 | Show/hide |
Query: LPESEIKETKEIAFSTIILYLADNVLRQVHEANTAEEVWKQLDKIYLTKSLTNKLYIKERFFGFKMDPNKDLEHNLDEYNRIVLDLANIDEKMSDENRAI
+ ESE ++ E+A+STI+LYL+D VLR V EA T E+WK+L+ +YLTKSL NK+YIKE+FFG+KMD +K LE NLDE+ +IV+DL NI EKMSDEN+A+
Subjt: LPESEIKETKEIAFSTIILYLADNVLRQVHEANTAEEVWKQLDKIYLTKSLTNKLYIKERFFGFKMDPNKDLEHNLDEYNRIVLDLANIDEKMSDENRAI
Query: ILLNSLPESYNEVKSAIRYDRDSLSMDIVLSALRSRDLELKKGKSKESEALFTRGRTEKKSSRNNSRT--------------------------------
ILLNSLPE+Y EVK+AI+Y RDSL+M IVL AL++R+LE+KK + K+ E L RGR+EKKS + R+
Subjt: ILLNSLPESYNEVKSAIRYDRDSLSMDIVLSALRSRDLELKKGKSKESEALFTRGRTEKKSSRNNSRT--------------------------------
Query: -------------------------------EVLTVLEGNFDSEWILDSGCSFHMTPNKHWFLNFEEIDGGKVLLGNH----------------------
EVL V + WI+DSGC+FHMTP++ + NF+++DGGKVLLG++
Subjt: -------------------------------EVLTVLEGNFDSEWILDSGCSFHMTPNKHWFLNFEEIDGGKVLLGNH----------------------
Query: -----------------------------QNNI-KIVKGAIVKAKGILHNGLYVLSANTMVGTTAVASERDQKQTKLWHARLGHMSERGLRELSKQGLL-
+N + K+ KG++VK +G L +GLYVL T+ G+ A+AS + + LWH RL H+SERGL+ LS+QGLL
Subjt: -----------------------------QNNI-KIVKGAIVKAKGILHNGLYVLSANTMVGTTAVASERDQKQTKLWHARLGHMSERGLRELSKQGLL-
Query: -----------------------------------------------------------VEDL-------------------------VEKQTERKLKCL
++D VE QT RK+K L
Subjt: -----------------------------------------------------------VEDL-------------------------VEKQTERKLKCL
Query: RTDNGLEFLSNEFKEFCKLTEGIIRHLTVRGTPQQNGLAERMNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAIDFKTPMEKWSNHPPDLS
RTDNGLEF++N+F +FCK +EGI RH TV TPQQNGLAER NRT++E+ RCL++NA LP KFWGEA TA YL+NRSPSTA++ KTP E W+ P L
Subjt: RTDNGLEFLSNEFKEFCKLTEGIIRHLTVRGTPQQNGLAERMNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAIDFKTPMEKWSNHPPDLS
Query: NLRTFGCIAYAHSKEGKLDNRAKKCLFLGYQSGIKGYRLWCIEKGEEKCIISRDVTFDESVIAW-----EKNQ------SETETNSEKNKSFEMELELAS
+LR FGC AYAH K+GKL+ RA KC+F+GY G+KGY+LWCIEKG KCIISRDVTF+E+ + + +K Q +E SE S +++ +
Subjt: NLRTFGCIAYAHSKEGKLDNRAKKCLFLGYQSGIKGYRLWCIEKGEEKCIISRDVTFDESVIAW-----EKNQ------SETETNSEKNKSFEMELELAS
Query: IQTPTENQPAETD--------VRVEEGAETQAETQAENIPPEPDSLQNYNLTRDRQRREIRRPARYASADIVHYALFTEMNSIDEEPLTYHEAINSINSD
+ + Q +E D + ++EGA + E+ + N LQNY LTRDR +RE P RY AD+V YAL +SI+ EPLT+ EAI S +
Subjt: IQTPTENQPAETD--------VRVEEGAETQAETQAENIPPEPDSLQNYNLTRDRQRREIRRPARYASADIVHYALFTEMNSIDEEPLTYHEAINSINSD
Query: KWKEAMQEEMNSLLKNNTWELVDRPSNKILVGCKWIYKVKQSVDPSQPKRYKARLVAKGYTQKEGVDYGEIFSPVVRHSSIRTLLSL
+WK+AM+EE+ SL KN TW LV +P N+ L+ KWIYK+K + RYKARLVAKGYTQKEGVD+ EIFSPVVRHSSIR +LS+
Subjt: KWKEAMQEEMNSLLKNNTWELVDRPSNKILVGCKWIYKVKQSVDPSQPKRYKARLVAKGYTQKEGVDYGEIFSPVVRHSSIRTLLSL
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.4e-54 | 33.05 | Show/hide |
Query: LVEDLVEKQTER---KLKCLRTDNGLEFLSNEFKEFCKLTEGIIRHLTVRGTPQQNGLAERMNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPS
+ +D V K K+ L DNG E+LSNE ++FC + +GI HLTV TPQ NG++ERM RT+ EK R ++S A L K FWGEA++TATYL+NR PS
Subjt: LVEDLVEKQTER---KLKCLRTDNGLEFLSNEFKEFCKLTEGIIRHLTVRGTPQQNGLAERMNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPS
Query: TAI--DFKTPMEKWSNHPPDLSNLRTFGCIAYAH--SKEGKLDNRAKKCLFLGYQSGIKGYRLWCIEKGEEKCIISRDVTFDE-SVIAWEKNQSET----
A+ KTP E W N P L +LR FG Y H +K+GK D+++ K +F+GY+ G++LW + EK I++RDV DE +++ + ET
Subjt: TAI--DFKTPMEKWSNHPPDLSNLRTFGCIAYAH--SKEGKLDNRAKKCLFLGYQSGIKGYRLWCIEKGEEKCIISRDVTFDE-SVIAWEKNQSET----
Query: ETNSEKNKSFEME-LELASIQTPTENQPAETDVRVEEGAETQ-----------AETQAENIPPEPDSLQ-------------------------------
++ +NK+F + ++ + P E++ + +++ E++ +T+ N E D++Q
Subjt: ETNSEKNKSFEME-LELASIQTPTENQPAETDVRVEEGAETQ-----------AETQAENIPPEPDSLQ-------------------------------
Query: -NYNLTRDRQRRE------IRRPARYASADIVH-----------YALFTEMNSIDEEPLTYHEAINSI-----------NSDKWKEAMQEEMNSLLKNNT
N N +R+ + E I P + +I++ + E NS+++ L H N + + W+EA+ E+N+ NNT
Subjt: -NYNLTRDRQRRE------IRRPARYASADIVH-----------YALFTEMNSIDEEPLTYHEAINSI-----------NSDKWKEAMQEEMNSLLKNNT
Query: WELVDRPSNKILVGCKWIYKVKQSVDPSQPKRYKARLVAKGYTQKEGVDYGEIFSPVVRHSSIRTLLSL
W + RP NK +V +W++ VK + + P RYKARLVA+G+TQK +DY E F+PV R SS R +LSL
Subjt: WELVDRPSNKILVGCKWIYKVKQSVDPSQPKRYKARLVAKGYTQKEGVDYGEIFSPVVRHSSIRTLLSL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.8e-93 | 30.41 | Show/hide |
Query: EIAFSTIILYLADNVLRQVHEANTAEEVWKQLDKIYLTKSLTNKLYIKERFFGFKMDPNKDLEHNLDEYNRIVLDLANIDEKMSDENRAIILLNSLPESY
E A S I L+L+D+V+ + + +TA +W +L+ +Y++K+LTNKLY+K++ + M + +L+ +N ++ LAN+ K+ +E++AI+LLNSLP SY
Subjt: EIAFSTIILYLADNVLRQVHEANTAEEVWKQLDKIYLTKSLTNKLYIKERFFGFKMDPNKDLEHNLDEYNRIVLDLANIDEKMSDENRAIILLNSLPESY
Query: NEVKSAIRYDRDSLSMDIVLSALRSRDLELKKGKSKESEALFT--RGRTEKKS------------SRNNSRTEVLTVLE----GNF--------------
+ + + I + + ++ + V SAL + +++K + +AL T RGR+ ++S S+N S++ V G+F
Subjt: NEVKSAIRYDRDSLSMDIVLSALRSRDLELKKGKSKESEALFT--RGRTEKKS------------SRNNSRTEVLTVLE----GNF--------------
Query: -----------------------------------DSEWILDSGCSFHMTPNKHWFLNFEEIDGGKVLLGNH-------------QNNI-----------
+SEW++D+ S H TP + F + D G V +GN + N+
Subjt: -----------------------------------DSEWILDSGCSFHMTPNKHWFLNFEEIDGGKVLLGNH-------------QNNI-----------
Query: ----------------------------KIVKGAIVKAKGILHNGLYVLSANTMVGTTAVASERDQKQTKLWHARLGHMSERGLRELSKQGLL-------
++ KG++V AKG+ LY +A G A +D+ LWH R+GHMSE+GL+ L+K+ L+
Subjt: ----------------------------KIVKGAIVKAKGILHNGLYVLSANTMVGTTAVASERDQKQTKLWHARLGHMSERGLRELSKQGLL-------
Query: -----------------------------------------------------VED-------------------------LVEKQTERKLKCLRTDNGL
++D LVE++T RKLK LR+DNG
Subjt: -----------------------------------------------------VED-------------------------LVEKQTERKLKCLRTDNGL
Query: EFLSNEFKEFCKLTEGIIRHLTVRGTPQQNGLAERMNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAIDFKTPMEKWSNHPPDLSNLRTFG
E+ S EF+E+C + GI TV GTPQ NG+AERMNRT++EK+R ++ A LPK FWGEA+ TA YL+NRSPS + F+ P W+N S+L+ FG
Subjt: EFLSNEFKEFCKLTEGIIRHLTVRGTPQQNGLAERMNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAIDFKTPMEKWSNHPPDLSNLRTFG
Query: CIAYAH---SKEGKLDNRAKKCLFLGYQSGIKGYRLWCIEKGEEKCIISRDVTFDESVIAWEKNQSETETN------------SEKNKSFEMELELASIQ
C A+AH + KLD+++ C+F+GY GYRLW + ++K I SRDV F ES + + SE N S S E + S Q
Subjt: CIAYAH---SKEGKLDNRAKKCLFLGYQSGIKGYRLWCIEKGEEKCIISRDVTFDESVIAWEKNQSETETN------------SEKNKSFEMELELASIQ
Query: TPTENQPAETDVRVEEGA-ETQAETQAENIPPEPDSLQNYNLTRDRQRREIRRPARYASADIVHYALFTEMNSIDEEPLTYHEAINSINSDKWKEAMQEE
+ E +++EG E + TQ E Q+ L R + R R RY S + V + S D EP + E ++ ++ +AMQEE
Subjt: TPTENQPAETDVRVEEGA-ETQAETQAENIPPEPDSLQNYNLTRDRQRREIRRPARYASADIVHYALFTEMNSIDEEPLTYHEAINSINSDKWKEAMQEE
Query: MNSLLKNNTWELVDRPSNKILVGCKWIYKVKQSVDPSQPKRYKARLVAKGYTQKEGVDYGEIFSPVVRHSSIRTLLSL
M SL KN T++LV+ P K + CKW++K+K+ D + RYKARLV KG+ QK+G+D+ EIFSPVV+ +SIRT+LSL
Subjt: MNSLLKNNTWELVDRPSNKILVGCKWIYKVKQSVDPSQPKRYKARLVAKGYTQKEGVDYGEIFSPVVRHSSIRTLLSL
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| P92512 Uncharacterized mitochondrial protein AtMg00710 | 8.8e-17 | 50.6 | Show/hide |
Query: MNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAIDFKTPMEKWSNHPPDLSNLRTFGCIAYAHSKEGKLDNRAKK
MNRT++EK+R ++ LPK F +A TA +++N+ PSTAI+F P E W P S LR FGC+AY H EGKL RAKK
Subjt: MNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAIDFKTPMEKWSNHPPDLSNLRTFGCIAYAHSKEGKLDNRAKK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 8.5e-36 | 26.73 | Show/hide |
Query: EDLVEKQTERKLKCLRTDNGLEFLSNEFKEFCKLTEGIIRHLT-VRGTPQQNGLAERMNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAID
++L+E + + ++ +DNG EF++ E+ ++ I HLT TP+ NGL+ER +R ++E L+S+A +PK +W A A YL+NR P+ +
Subjt: EDLVEKQTERKLKCLRTDNGLEFLSNEFKEFCKLTEGIIRHLT-VRGTPQQNGLAERMNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAID
Query: FKTPMEKWSNHPPDLSNLRTFGCIAYAHSK---EGKLDNRAKKCLFLGYQSGIKGYRLWCIEKGEEKCIISRDVTFD---------------------ES
++P +K P+ LR FGC Y + + KLD+++++C+FLGY Y C+ + ISR V FD ES
Subjt: FKTPMEKWSNHPPDLSNLRTFGCIAYAHSK---EGKLDNRAKKCLFLGYQSGIKGYRLWCIEKGEEKCIISRDVTFD---------------------ES
Query: VIAW-----------------------------------------------------------------------EKNQSETETNSEKNKS-----FEME
W + Q++T+T+S +N S E
Subjt: VIAW-----------------------------------------------------------------------EKNQSETETNSEKNKS-----FEME
Query: LELA-SIQTPTENQPAETDVRVEEGAETQAETQAENIPPEPDSLQNYNLTRDRQRREIRRPARYASADIV----HYALFTEMNSIDEEPLTYHEAINSIN
+LA S+ TP ++ + + + + T + P L ++ A A I+ Y+L + + + EP T AI ++
Subjt: LELA-SIQTPTENQPAETDVRVEEGAETQAETQAENIPPEPDSLQNYNLTRDRQRREIRRPARYASADIV----HYALFTEMNSIDEEPLTYHEAINSIN
Query: SDKWKEAMQEEMNSLLKNNTWELV-DRPSNKILVGCKWIYKVKQSVDPSQPKRYKARLVAKGYTQKEGVDYGEIFSPVVRHSSIRTLLSL
++W+ AM E+N+ + N+TW+LV PS+ +VGC+WI+ K + D S RYKARLVAKGY Q+ G+DY E FSPV++ +SIR +L +
Subjt: SDKWKEAMQEEMNSLLKNNTWELV-DRPSNKILVGCKWIYKVKQSVDPSQPKRYKARLVAKGYTQKEGVDYGEIFSPVVRHSSIRTLLSL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 9.3e-35 | 25.65 | Show/hide |
Query: LLVEDLVEKQTERKLKCLRTDNGLEFLSNEFKEFCKLTEGIIRHLTVRGTPQQNGLAERMNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTA
++ + LVE + + ++ L +DNG EF+ +++ GI + TP+ NGL+ER +R ++E L+S+A +PK +W A A YL+NR P+
Subjt: LLVEDLVEKQTERKLKCLRTDNGLEFLSNEFKEFCKLTEGIIRHLTVRGTPQQNGLAERMNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTA
Query: IDFKTPMEKWSNHPPDLSNLRTFGCIAYAHSK---EGKLDNRAKKCLFLGYQSGIKGYRLWCIEKGEEKCIISRDVTFDESVIAWEKNQSETETNSEKNK
+ ++P +K PP+ L+ FGC Y + KL++++K+C F+GY Y C+ + SR V FDE + T+ E+
Subjt: IDFKTPMEKWSNHPPDLSNLRTFGCIAYAHSK---EGKLDNRAKKCLFLGYQSGIKGYRLWCIEKGEEKCIISRDVTFDESVIAWEKNQSETETNSEKNK
Query: S----------------------------------------------FEMELELASIQTPTENQPAETDVRVEEGAETQAETQAEN--------------
L +SI +P+ ++P + +TQ N
Subjt: S----------------------------------------------FEMELELASIQTPTENQPAETDVRVEEGAETQAETQAEN--------------
Query: ----------------------------------------------IPPEPDSLQ-------NYNLTRDRQRREIRRPARYASADIVHYALFTEMNSIDE
+ P P +Q N + R + IR+P + S YA NS
Subjt: ----------------------------------------------IPPEPDSLQ-------NYNLTRDRQRREIRRPARYASADIVHYALFTEMNSIDE
Query: EPLTYHEAINSINSDKWKEAMQEEMNSLLKNNTWELVDRPSNKI-LVGCKWIYKVKQSVDPSQPKRYKARLVAKGYTQKEGVDYGEIFSPVVRHSSIRTL
EP T AI ++ D+W++AM E+N+ + N+TW+LV P + +VGC+WI+ K + D S RYKARLVAKGY Q+ G+DY E FSPV++ +SIR +
Subjt: EPLTYHEAINSINSDKWKEAMQEEMNSLLKNNTWELVDRPSNKI-LVGCKWIYKVKQSVDPSQPKRYKARLVAKGYTQKEGVDYGEIFSPVVRHSSIRTL
Query: LSL
L +
Subjt: LSL
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT3G10690.1 DNA GYRASE A | 1.7e-07 | 52.54 | Show/hide |
Query: VDFVPTFDNSQKEPSLLPAQLPTLLSNGSSGITVIHLRRV--RGIGELI-VPSYFFHKP
VDFV FDNSQKEP++LPA+LP LL NG+SGI V + +GEL+ V H P
Subjt: VDFVPTFDNSQKEPSLLPAQLPTLLSNGSSGITVIHLRRV--RGIGELI-VPSYFFHKP
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 6.7e-20 | 45.19 | Show/hide |
Query: EEPLTYHEAINSINSDKWKEAMQEEMNSLLKNNTWELVDRPSNKILVGCKWIYKVKQSVDPSQPKRYKARLVAKGYTQKEGVDYGEIFSPVVRHSSIRTL
+EP TY+EA + W AM +E+ ++ +TWE+ P NK +GCKW+YK+K + D +RYKARLVAKGYTQ+EG+D+ E FSPV + +S++ +
Subjt: EEPLTYHEAINSINSDKWKEAMQEEMNSLLKNNTWELVDRPSNKILVGCKWIYKVKQSVDPSQPKRYKARLVAKGYTQKEGVDYGEIFSPVVRHSSIRTL
Query: LSLN
L+++
Subjt: LSLN
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| ATMG00300.1 Gag-Pol-related retrotransposon family protein | 3.8e-07 | 40.91 | Show/hide |
Query: IKIVKGAIVKAKGILHNGLYVLSANTMVGTTAVASERDQKQTKLWHARLGHMSERGLRELSKQGLL
+K++KG KG H+ LY+L + G + +A E + +T+LWH+RL HMS+RG+ L K+G L
Subjt: IKIVKGAIVKAKGILHNGLYVLSANTMVGTTAVASERDQKQTKLWHARLGHMSERGLRELSKQGLL
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| ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 6.2e-18 | 50.6 | Show/hide |
Query: MNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAIDFKTPMEKWSNHPPDLSNLRTFGCIAYAHSKEGKLDNRAKK
MNRT++EK+R ++ LPK F +A TA +++N+ PSTAI+F P E W P S LR FGC+AY H EGKL RAKK
Subjt: MNRTLLEKIRCLMSNACLPKKFWGEALMTATYLVNRSPSTAIDFKTPMEKWSNHPPDLSNLRTFGCIAYAHSKEGKLDNRAKK
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 6.2e-18 | 43.64 | Show/hide |
Query: TEMNSIDEEPLTYHEAINSINSDKWKEAMQEEMNSLLKNNTWELVDRPSNKILVGCKWIYKVKQSVDPSQPKRYKARLVAKGYTQKEGVDYGEIFSPVVR
T +I +EP I ++ W +AMQEE+++L +N TW LV P N+ ++GCKW++K K D + R KARLVAKG+ Q+EG+ + E +SPVVR
Subjt: TEMNSIDEEPLTYHEAINSINSDKWKEAMQEEMNSLLKNNTWELVDRPSNKILVGCKWIYKVKQSVDPSQPKRYKARLVAKGYTQKEGVDYGEIFSPVVR
Query: HSSIRTLLSL
++IRT+L++
Subjt: HSSIRTLLSL
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