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Lag0035211 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035211
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr3:16701088..16702697
RNA-Seq ExpressionLag0035211
SyntenyLag0035211
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144467.1 uncharacterized protein LOC111014147 [Momordica charantia]5.7e-4344.75Show/hide
Query:  LKDEIEALIQNGYLKEFAAETGTEVAVDQRWSRPRLTKDGRDKEEPHERSEPYLEDQLD------------EVQVGKEKLLADKQANVKIHQILIDGGSS
        LK+E+E LI+ GYLKE+  E             P+ T++G   + P       +   ++            E + G+E+   ++ ANVK+H++L+DGGS 
Subjt:  LKDEIEALIQNGYLKEFAAETGTEVAVDQRWSRPRLTKDGRDKEEPHERSEPYLEDQLD------------EVQVGKEKLLADKQANVKIHQILIDGGSS

Query:  ADVLSLTTFEAMKLGRELLKSSLTPLVGFGGEKVTLEGSIELPMTFEDGQNTVTKIVNFLVMDCISGYNTILGRPTVHGMKTIASTYHQLLKFPTQNGVG
        AD+LS T ++AM LG ++LKSS  PLVGFGGE+V  EG IE P+TF  G  +VTK+V+ LV++  S YN ILGRPT+H ++ I STYHQ +KFPT  GVG
Subjt:  ADVLSLTTFEAMKLGRELLKSSLTPLVGFGGEKVTLEGSIELPMTFEDGQNTVTKIVNFLVMDCISGYNTILGRPTVHGMKTIASTYHQLLKFPTQNGVG

Query:  VVKGEQKASRECYWTALKE
         +KGEQ+ SRECY+T++++
Subjt:  VVKGEQKASRECYWTALKE

XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]3.5e-4059.26Show/hide
Query:  KQANVKIHQILIDGGSSADVLSLTTFEAMKLGRELLKSSLTPLVGFGGEKVTLEGSIELPMTFEDGQNTVTKIVNFLVMDCISGYNTILGRPTVHGMKTI
        K AN K+H+IL+DGGSS D+ SLT ++AM LG E+LKSSLTPL+GFGGE++  +G IELP+TF     ++T++V+FLV+D  S YNTIL RPT+H ++ I
Subjt:  KQANVKIHQILIDGGSSADVLSLTTFEAMKLGRELLKSSLTPLVGFGGEKVTLEGSIELPMTFEDGQNTVTKIVNFLVMDCISGYNTILGRPTVHGMKTI

Query:  ASTYHQLLKFPTQNGVGVVKGEQKASRECYWTALK
         STYHQ +KFPT  GVG +KGEQ+ SRECY+T+++
Subjt:  ASTYHQLLKFPTQNGVGVVKGEQKASRECYWTALK

XP_022150858.1 uncharacterized protein LOC111018902 [Momordica charantia]4.1e-4145.62Show/hide
Query:  LKDEIEALIQNGYLKEFAAETGTEVAVDQRWSRPRLTKDGRDKE---------EPHERSEPYLEDQLDEV-QVGKEKLLAD-KQANVKIHQILIDGGSSA
        LK+E+E LIQ GYLKE+  +             P+ T++ R+++         E       +LED++  +     + L+ + K AN K+H IL+DGGSS 
Subjt:  LKDEIEALIQNGYLKEFAAETGTEVAVDQRWSRPRLTKDGRDKE---------EPHERSEPYLEDQLDEV-QVGKEKLLAD-KQANVKIHQILIDGGSSA

Query:  DVLSLTTFEAMKLGRELLKSSLTPLVGFGGEKVTLEGSIELPMTFEDGQNTVTKIVNFLVMDCISGYNTILGRPTVHGMKTIASTYHQLLKFPTQNGVGV
        D++SLT ++ M LG   LKSS  PLVGFGGE V  EG IELP+TF  G  ++TK+V+FLV+D  S  N ILGRPT+H +K I S YHQ +KFPT  G+G 
Subjt:  DVLSLTTFEAMKLGRELLKSSLTPLVGFGGEKVTLEGSIELPMTFEDGQNTVTKIVNFLVMDCISGYNTILGRPTVHGMKTIASTYHQLLKFPTQNGVGV

Query:  VKGEQKASRECYWTALK
        +KGEQ+ SRECY+ ++K
Subjt:  VKGEQKASRECYWTALK

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]2.4e-4162.5Show/hide
Query:  KQANVKIHQILIDGGSSADVLSLTTFEAMKLGRELLKSSLTPLVGFGGEKVTLEGSIELPMTFEDGQNTVTKIVNFLVMDCISGYNTILGRPTVHGMKTI
        K ANVK+H+IL+DGGSSAD++S T ++AM LG ++LKSS  PLVGFGGE+V LEG IELP+TF  G  +VTK+V+FLV++  S YN ILGRPT+H +K I
Subjt:  KQANVKIHQILIDGGSSADVLSLTTFEAMKLGRELLKSSLTPLVGFGGEKVTLEGSIELPMTFEDGQNTVTKIVNFLVMDCISGYNTILGRPTVHGMKTI

Query:  ASTYHQLLKFPTQNGVGVVKGEQKASRECYWTALKE
         STYHQ  KFPT  GVG +KGEQ+ SRECY T++++
Subjt:  ASTYHQLLKFPTQNGVGVVKGEQKASRECYWTALKE

XP_022156748.1 uncharacterized protein LOC111023587 [Momordica charantia]4.1e-4144.75Show/hide
Query:  LKDEIEALIQNGYLKEFAAETGTEVAVDQRWSRPRL-TKDGRDKEEPHERSEPYLEDQLDEVQVGKEK------------LLADKQANVKIHQILIDGGS
        LK+E+E LI+ GYLKE           ++ W + +   ++ R   E +E    Y+ D+   ++  +++            ++  K ANVK+H+IL+DGGS
Subjt:  LKDEIEALIQNGYLKEFAAETGTEVAVDQRWSRPRL-TKDGRDKEEPHERSEPYLEDQLDEVQVGKEK------------LLADKQANVKIHQILIDGGS

Query:  SADVLSLTTFEAMKLGRELLKSSLTPLVGFGGEKVTLEGSIELPMTFEDGQNTVTKIVNFLVMDCISGYNTILGRPTVHGMKTIASTYHQLLKFPTQNGV
        SAD++S T ++AM L  ++LKSS  PLVGFGGE+V  EG IELP+TF  G   VTK+V+FLV++  S YN ILGR T+H +K I STYHQ +KFPT  GV
Subjt:  SADVLSLTTFEAMKLGRELLKSSLTPLVGFGGEKVTLEGSIELPMTFEDGQNTVTKIVNFLVMDCISGYNTILGRPTVHGMKTIASTYHQLLKFPTQNGV

Query:  GVVKGEQKASRECYWTALK
          +KGEQ+ SRECY+T+++
Subjt:  GVVKGEQKASRECYWTALK

TrEMBL top hitse value%identityAlignment
A0A6J1CTS4 uncharacterized protein LOC1110141472.8e-4344.75Show/hide
Query:  LKDEIEALIQNGYLKEFAAETGTEVAVDQRWSRPRLTKDGRDKEEPHERSEPYLEDQLD------------EVQVGKEKLLADKQANVKIHQILIDGGSS
        LK+E+E LI+ GYLKE+  E             P+ T++G   + P       +   ++            E + G+E+   ++ ANVK+H++L+DGGS 
Subjt:  LKDEIEALIQNGYLKEFAAETGTEVAVDQRWSRPRLTKDGRDKEEPHERSEPYLEDQLD------------EVQVGKEKLLADKQANVKIHQILIDGGSS

Query:  ADVLSLTTFEAMKLGRELLKSSLTPLVGFGGEKVTLEGSIELPMTFEDGQNTVTKIVNFLVMDCISGYNTILGRPTVHGMKTIASTYHQLLKFPTQNGVG
        AD+LS T ++AM LG ++LKSS  PLVGFGGE+V  EG IE P+TF  G  +VTK+V+ LV++  S YN ILGRPT+H ++ I STYHQ +KFPT  GVG
Subjt:  ADVLSLTTFEAMKLGRELLKSSLTPLVGFGGEKVTLEGSIELPMTFEDGQNTVTKIVNFLVMDCISGYNTILGRPTVHGMKTIASTYHQLLKFPTQNGVG

Query:  VVKGEQKASRECYWTALKE
         +KGEQ+ SRECY+T++++
Subjt:  VVKGEQKASRECYWTALKE

A0A6J1CZ14 uncharacterized protein LOC1110159011.7e-4059.26Show/hide
Query:  KQANVKIHQILIDGGSSADVLSLTTFEAMKLGRELLKSSLTPLVGFGGEKVTLEGSIELPMTFEDGQNTVTKIVNFLVMDCISGYNTILGRPTVHGMKTI
        K AN K+H+IL+DGGSS D+ SLT ++AM LG E+LKSSLTPL+GFGGE++  +G IELP+TF     ++T++V+FLV+D  S YNTIL RPT+H ++ I
Subjt:  KQANVKIHQILIDGGSSADVLSLTTFEAMKLGRELLKSSLTPLVGFGGEKVTLEGSIELPMTFEDGQNTVTKIVNFLVMDCISGYNTILGRPTVHGMKTI

Query:  ASTYHQLLKFPTQNGVGVVKGEQKASRECYWTALK
         STYHQ +KFPT  GVG +KGEQ+ SRECY+T+++
Subjt:  ASTYHQLLKFPTQNGVGVVKGEQKASRECYWTALK

A0A6J1DAK4 uncharacterized protein LOC1110189022.0e-4145.62Show/hide
Query:  LKDEIEALIQNGYLKEFAAETGTEVAVDQRWSRPRLTKDGRDKE---------EPHERSEPYLEDQLDEV-QVGKEKLLAD-KQANVKIHQILIDGGSSA
        LK+E+E LIQ GYLKE+  +             P+ T++ R+++         E       +LED++  +     + L+ + K AN K+H IL+DGGSS 
Subjt:  LKDEIEALIQNGYLKEFAAETGTEVAVDQRWSRPRLTKDGRDKE---------EPHERSEPYLEDQLDEV-QVGKEKLLAD-KQANVKIHQILIDGGSSA

Query:  DVLSLTTFEAMKLGRELLKSSLTPLVGFGGEKVTLEGSIELPMTFEDGQNTVTKIVNFLVMDCISGYNTILGRPTVHGMKTIASTYHQLLKFPTQNGVGV
        D++SLT ++ M LG   LKSS  PLVGFGGE V  EG IELP+TF  G  ++TK+V+FLV+D  S  N ILGRPT+H +K I S YHQ +KFPT  G+G 
Subjt:  DVLSLTTFEAMKLGRELLKSSLTPLVGFGGEKVTLEGSIELPMTFEDGQNTVTKIVNFLVMDCISGYNTILGRPTVHGMKTIASTYHQLLKFPTQNGVGV

Query:  VKGEQKASRECYWTALK
        +KGEQ+ SRECY+ ++K
Subjt:  VKGEQKASRECYWTALK

A0A6J1DQY2 uncharacterized protein LOC1110223211.2e-4162.5Show/hide
Query:  KQANVKIHQILIDGGSSADVLSLTTFEAMKLGRELLKSSLTPLVGFGGEKVTLEGSIELPMTFEDGQNTVTKIVNFLVMDCISGYNTILGRPTVHGMKTI
        K ANVK+H+IL+DGGSSAD++S T ++AM LG ++LKSS  PLVGFGGE+V LEG IELP+TF  G  +VTK+V+FLV++  S YN ILGRPT+H +K I
Subjt:  KQANVKIHQILIDGGSSADVLSLTTFEAMKLGRELLKSSLTPLVGFGGEKVTLEGSIELPMTFEDGQNTVTKIVNFLVMDCISGYNTILGRPTVHGMKTI

Query:  ASTYHQLLKFPTQNGVGVVKGEQKASRECYWTALKE
         STYHQ  KFPT  GVG +KGEQ+ SRECY T++++
Subjt:  ASTYHQLLKFPTQNGVGVVKGEQKASRECYWTALKE

A0A6J1DRG9 uncharacterized protein LOC1110235872.0e-4144.75Show/hide
Query:  LKDEIEALIQNGYLKEFAAETGTEVAVDQRWSRPRL-TKDGRDKEEPHERSEPYLEDQLDEVQVGKEK------------LLADKQANVKIHQILIDGGS
        LK+E+E LI+ GYLKE           ++ W + +   ++ R   E +E    Y+ D+   ++  +++            ++  K ANVK+H+IL+DGGS
Subjt:  LKDEIEALIQNGYLKEFAAETGTEVAVDQRWSRPRL-TKDGRDKEEPHERSEPYLEDQLDEVQVGKEK------------LLADKQANVKIHQILIDGGS

Query:  SADVLSLTTFEAMKLGRELLKSSLTPLVGFGGEKVTLEGSIELPMTFEDGQNTVTKIVNFLVMDCISGYNTILGRPTVHGMKTIASTYHQLLKFPTQNGV
        SAD++S T ++AM L  ++LKSS  PLVGFGGE+V  EG IELP+TF  G   VTK+V+FLV++  S YN ILGR T+H +K I STYHQ +KFPT  GV
Subjt:  SADVLSLTTFEAMKLGRELLKSSLTPLVGFGGEKVTLEGSIELPMTFEDGQNTVTKIVNFLVMDCISGYNTILGRPTVHGMKTIASTYHQLLKFPTQNGV

Query:  GVVKGEQKASRECYWTALK
          +KGEQ+ SRECY+T+++
Subjt:  GVVKGEQKASRECYWTALK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGTTGAGGTGCCCTCGAAGTTCAAGGTACCCACATTCAAACAGTATGATGGCAAGAAGGACCCCGTGAAACATTTAGATACCTACAAGACATGGATGGACTTCCA
CGGCGTTTCAGACACAATCAGAGGTTGCGAAGGAGGTCCATTAGTTCCTTCAAGAAACTCCCGAGCATTCATCTCACAGCTCATGGGAGCCAGAGAACAGAGTAAGCCTC
ACATTAATCTTCTAACTGTCAAGCAACAGCCAGGTAAGAGCCAACCTCGAACCTATGTTGAGTCTGTTTCCAGGGCACAAAAGTACATGAGCGCAAAAGAGTTGTTGAAA
TCAAAGAGGTCAGAACGAGAGCACAAGAGACATTCTTCATTCGACCAGAAAAAAAGGAAGAAAAAGGATAAAAAAAGCAGACGGACGATGGTGGCCGAGACCGAGCTGAC
CATGACCATGGCCGAGGCCGAGCACATCCCTTTGTTGAAGGATGAAATCGAAGCACTAATCCAGAATGGATATCTGAAGGAGTTTGCCGCTGAAACCGGGACCGAGGTCG
CGGTCGACCAGAGATGGTCGAGGCCGAGGTTGACCAAAGATGGCCGAGACAAAGAAGAACCCCACGAGAGATCAGAACCATATTTGGAAGACCAACTAGACGAGGTTCAA
GTAGGAAAAGAAAAGCTATTGGCAGATAAGCAAGCCAATGTGAAAATCCATCAGATTCTGATCGATGGAGGAAGTTCAGCTGATGTCCTTTCTCTAACAACCTTTGAGGC
AATGAAGTTAGGGAGAGAACTCTTAAAATCAAGCCTTACCCCACTTGTAGGATTTGGAGGAGAAAAGGTGACACTAGAGGGTAGCATAGAACTTCCTATGACCTTTGAGG
ATGGACAAAATACAGTGACGAAGATAGTAAACTTCTTAGTCATGGATTGCATTTCAGGCTACAATACAATCTTGGGAAGGCCGACCGTGCATGGTATGAAGACCATAGCT
TCAACTTATCATCAGTTGCTGAAGTTTCCAACTCAGAATGGTGTAGGAGTTGTCAAAGGGGAACAAAAGGCATCGAGGGAGTGTTATTGGACAGCGTTGAAAGAAGTTAA
GCCACTGAGGGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGTTGAGGTGCCCTCGAAGTTCAAGGTACCCACATTCAAACAGTATGATGGCAAGAAGGACCCCGTGAAACATTTAGATACCTACAAGACATGGATGGACTTCCA
CGGCGTTTCAGACACAATCAGAGGTTGCGAAGGAGGTCCATTAGTTCCTTCAAGAAACTCCCGAGCATTCATCTCACAGCTCATGGGAGCCAGAGAACAGAGTAAGCCTC
ACATTAATCTTCTAACTGTCAAGCAACAGCCAGGTAAGAGCCAACCTCGAACCTATGTTGAGTCTGTTTCCAGGGCACAAAAGTACATGAGCGCAAAAGAGTTGTTGAAA
TCAAAGAGGTCAGAACGAGAGCACAAGAGACATTCTTCATTCGACCAGAAAAAAAGGAAGAAAAAGGATAAAAAAAGCAGACGGACGATGGTGGCCGAGACCGAGCTGAC
CATGACCATGGCCGAGGCCGAGCACATCCCTTTGTTGAAGGATGAAATCGAAGCACTAATCCAGAATGGATATCTGAAGGAGTTTGCCGCTGAAACCGGGACCGAGGTCG
CGGTCGACCAGAGATGGTCGAGGCCGAGGTTGACCAAAGATGGCCGAGACAAAGAAGAACCCCACGAGAGATCAGAACCATATTTGGAAGACCAACTAGACGAGGTTCAA
GTAGGAAAAGAAAAGCTATTGGCAGATAAGCAAGCCAATGTGAAAATCCATCAGATTCTGATCGATGGAGGAAGTTCAGCTGATGTCCTTTCTCTAACAACCTTTGAGGC
AATGAAGTTAGGGAGAGAACTCTTAAAATCAAGCCTTACCCCACTTGTAGGATTTGGAGGAGAAAAGGTGACACTAGAGGGTAGCATAGAACTTCCTATGACCTTTGAGG
ATGGACAAAATACAGTGACGAAGATAGTAAACTTCTTAGTCATGGATTGCATTTCAGGCTACAATACAATCTTGGGAAGGCCGACCGTGCATGGTATGAAGACCATAGCT
TCAACTTATCATCAGTTGCTGAAGTTTCCAACTCAGAATGGTGTAGGAGTTGTCAAAGGGGAACAAAAGGCATCGAGGGAGTGTTATTGGACAGCGTTGAAAGAAGTTAA
GCCACTGAGGGCCTAG
Protein sequenceShow/hide protein sequence
MKVEVPSKFKVPTFKQYDGKKDPVKHLDTYKTWMDFHGVSDTIRGCEGGPLVPSRNSRAFISQLMGAREQSKPHINLLTVKQQPGKSQPRTYVESVSRAQKYMSAKELLK
SKRSEREHKRHSSFDQKKRKKKDKKSRRTMVAETELTMTMAEAEHIPLLKDEIEALIQNGYLKEFAAETGTEVAVDQRWSRPRLTKDGRDKEEPHERSEPYLEDQLDEVQ
VGKEKLLADKQANVKIHQILIDGGSSADVLSLTTFEAMKLGRELLKSSLTPLVGFGGEKVTLEGSIELPMTFEDGQNTVTKIVNFLVMDCISGYNTILGRPTVHGMKTIA
STYHQLLKFPTQNGVGVVKGEQKASRECYWTALKEVKPLRA