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Lag0035225 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035225
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCR4-NOT transcription complex subunit 11
Genome locationchr3:17042170..17047114
RNA-Seq ExpressionLag0035225
SyntenyLag0035225
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0017148 - negative regulation of translation (biological process)
GO:0031047 - gene silencing by RNA (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
InterPro domainsIPR019312 - CCR4-NOT transcription complex subunit 11


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063084.1 CCR4-NOT transcription complex subunit 11 isoform X1 [Cucumis melo var. makuwa]2.2e-3673.73Show/hide
Query:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITES
        Q QVVVELANDPKLVYH GL P+KL  LVENNP IAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVN L T  ELPS+FIHMYI NCIS CEGI   
Subjt:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITES

Query:  KIAIEMCPHLKKEEVSGA
        KI +     + +E   G+
Subjt:  KIAIEMCPHLKKEEVSGA

XP_016902636.1 PREDICTED: CCR4-NOT transcription complex subunit 11 isoform X2 [Cucumis melo]1.1e-3583.84Show/hide
Query:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITE
        Q QVVVELANDPKLVYH GL P+KL  LVENNP IAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVN L T  ELPS+FIHMYI NCIS CEGI +
Subjt:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITE

XP_022973810.1 CCR4-NOT transcription complex subunit 11 [Cucurbita maxima]1.1e-3583.84Show/hide
Query:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITE
        Q QVVVELANDPKLVYH GL P+KL  LVENNP IAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVN L T  ELPS+FIHMYI NCIS CEGI +
Subjt:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITE

XP_023512353.1 CCR4-NOT transcription complex subunit 11-like [Cucurbita pepo subsp. pepo]1.1e-3583.84Show/hide
Query:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITE
        Q QVVVELANDPKLVYH GL P+KL  LVENNP IAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVN L T  ELPS+FIHMYI NCIS CEGI +
Subjt:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITE

XP_038901187.1 CCR4-NOT transcription complex subunit 11 isoform X3 [Benincasa hispida]1.1e-3583.84Show/hide
Query:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITE
        Q QVVVELANDPKLVYH GL P+KL  LVENNP IAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVN L T  ELPS+FIHMYI NCIS CEGI +
Subjt:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITE

TrEMBL top hitse value%identityAlignment
A0A0A0LK95 CCR4-NOT transcription complex subunit 115.3e-3683.84Show/hide
Query:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITE
        Q QVVVELANDPKLVYH GL P+KL  LVENNP IAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVN L T  ELPS+FIHMYI NCIS CEGI +
Subjt:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITE

A0A1S4E330 CCR4-NOT transcription complex subunit 115.3e-3683.84Show/hide
Query:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITE
        Q QVVVELANDPKLVYH GL P+KL  LVENNP IAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVN L T  ELPS+FIHMYI NCIS CEGI +
Subjt:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITE

A0A5D3BST3 CCR4-NOT transcription complex subunit 111.1e-3673.73Show/hide
Query:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITES
        Q QVVVELANDPKLVYH GL P+KL  LVENNP IAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVN L T  ELPS+FIHMYI NCIS CEGI   
Subjt:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITES

Query:  KIAIEMCPHLKKEEVSGA
        KI +     + +E   G+
Subjt:  KIAIEMCPHLKKEEVSGA

A0A6J1EVU1 CCR4-NOT transcription complex subunit 115.3e-3683.84Show/hide
Query:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITE
        Q QVVVELANDPKLVYH GL P+KL  LVENNP IAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVN L T  ELPS+FIHMYI NCIS CEGI +
Subjt:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITE

A0A6J1ICB1 CCR4-NOT transcription complex subunit 115.3e-3683.84Show/hide
Query:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITE
        Q QVVVELANDPKLVYH GL P+KL  LVENNP IAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVN L T  ELPS+FIHMYI NCIS CEGI +
Subjt:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITE

SwissProt top hitse value%identityAlignment
A4QP78 CCR4-NOT transcription complex subunit 113.0e-2863.64Show/hide
Query:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITE
        Q Q++ EL  D KLVYH GL P KL  LVENNP +A+E+L KL++S +I EYF+VLVNMDMSLHSMEVVN L T  +LP +FIH+YI+NCIS CE I +
Subjt:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITE

B0BNA9 CCR4-NOT transcription complex subunit 112.7e-2964.65Show/hide
Query:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITE
        Q Q++ EL  DPKLVYH GL P KL  LVENNP +A+E+L KL+ S +I EYF+VLVNMDMSLHSMEVVN L T  +LP +FIH+YI+NCIS CE I +
Subjt:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITE

Q1ZXI2 CCR4-NOT transcription complex subunit 111.8e-1737.74Show/hide
Query:  LSKLIEGSFLRTASIRSVAIALSFLIMSLSMLATSASTQSKGVTASLLLQ-----------LQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVL
        LS  +  +   T +  + +   + LI S +   T+ S  SK +   L+ +           LQ+  E+  DPKL Y+ GL P+ L  LVENN  +A++ L
Subjt:  LSKLIEGSFLRTASIRSVAIALSFLIMSLSMLATSASTQSKGVTASLLLQ-----------LQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVL

Query:  KKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITE
         KLINSP+  ++F  L++M+M+  SMEVVN L  T +LP  FI MYI NCI  C  I +
Subjt:  KKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITE

Q9CWN7 CCR4-NOT transcription complex subunit 112.7e-2964.65Show/hide
Query:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITE
        Q Q++ EL  DPKLVYH GL P KL  LVENNP +A+E+L KL+ S +I EYF+VLVNMDMSLHSMEVVN L T  +LP +FIH+YI+NCIS CE I +
Subjt:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITE

Q9UKZ1 CCR4-NOT transcription complex subunit 112.7e-2964.65Show/hide
Query:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITE
        Q Q++ EL  DPKLVYH GL P KL  LVENNP +A+E+L KL+ S +I EYF+VLVNMDMSLHSMEVVN L T  +LP +FIH+YI+NCIS CE I +
Subjt:  QLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISLCEGITE

Arabidopsis top hitse value%identityAlignment
AT5G18420.1 unknown protein1.0e-2861.11Show/hide
Query:  VTASLLLQLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISL
        VT S   Q  ++ ELANDPKLV+H G+ P+KL  LVE+NP IAVE+L KL NS EI +Y+  L NMDMSLHSMEVVN L T  ELP  FI MYI NCIS 
Subjt:  VTASLLLQLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISL

Query:  CEGITESK
        CE   + K
Subjt:  CEGITESK

AT5G18420.2 unknown protein5.2e-2863.73Show/hide
Query:  VTASLLLQLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISL
        VT S   Q  ++ ELANDPKLV+H G+ P+KL  LVE+NP IAVE+L KL NS EI +Y+  L NMDMSLHSMEVVN L T  ELP  FI MYI NCIS 
Subjt:  VTASLLLQLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISL

Query:  CE
        CE
Subjt:  CE

AT5G18420.3 unknown protein5.2e-2863.73Show/hide
Query:  VTASLLLQLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISL
        VT S   Q  ++ ELANDPKLV+H G+ P+KL  LVE+NP IAVE+L KL NS EI +Y+  L NMDMSLHSMEVVN L T  ELP  FI MYI NCIS 
Subjt:  VTASLLLQLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIANCISL

Query:  CE
        CE
Subjt:  CE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTTTAGCCTTACTGCTAAGTTTGTCATTTCAAGGATATGCTCATGGATGGTACGAGAACCATCAAACTTAATGTTGGTTAATGTACTCATTAGTGTTCCAGCAGG
TGGCTTATCGGTCGACTCATATTGTGAACAATTTTCACAAATTTCACAAAATTCCTTATCACTTTCAGTTTTTGCAATTGTGGACTTGATATTGCTTGCTAAAGTCATTC
GCATAAACATTAAGCTTAACCTATTTGATCTTTCCAAGCTTATAGAAGGATCTTTCCTCAGAACTGCTAGTATTAGAAGCGTCGCCATTGCCCTCTCCTTTCTGATCATG
TCGCTGTCGATGCTTGCAACCTCCGCCTCCACCCAGTCGAAGGGCGTCACCGCCTCTCTCCTTCTGCAGCTGCAAGTGGTGGTGGAGTTAGCAAATGACCCAAAACTTGT
ATATCATCGTGGATTGGCACCACAAAAGCTACTTGGACTGGTGGAAAACAATCCTTTTATTGCAGTTGAAGTTCTAAAGAAATTGATTAATTCCCCTGAAATTGCAGAGT
ACTTTACTGTTCTTGTTAACATGGACATGAGTTTACACTCTATGGAAGTTGTAAACGGGCTAAGGACAACTTTTGAACTTCCCTCTAAGTTCATACACATGTACATCGCT
AATTGTATATCATTGTGTGAGGGCATTACAGAGTCCAAAATTGCGATTGAAATGTGCCCACATCTAAAAAAGGAAGAAGTTAGCGGAGCAAAGGACCAGAAGATATGCAC
CCACATCGCAAGGAAAAAAAAAATCTCACTAAGTACAGGAGGAAAATATGTGGAAATGTGCCACAAATATGCCCGCAAATTGAGAAGGAAAGAGGGCCCAAGTTTACGGC
AAACTGTTGTGACTCTTCAGCAAAAACAATATTATCAGCGGGATCCTCCCGGAACTTCAGATTTTTTGGAATATGTTTCAACTCCAATGAAGCTCTACCGATTAAGCGCT
AGGCAATTGACTATCCCTAGTTCAACTACTAGCATTCACCAACTCATAATGGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCTTTAGCCTTACTGCTAAGTTTGTCATTTCAAGGATATGCTCATGGATGGTACGAGAACCATCAAACTTAATGTTGGTTAATGTACTCATTAGTGTTCCAGCAGG
TGGCTTATCGGTCGACTCATATTGTGAACAATTTTCACAAATTTCACAAAATTCCTTATCACTTTCAGTTTTTGCAATTGTGGACTTGATATTGCTTGCTAAAGTCATTC
GCATAAACATTAAGCTTAACCTATTTGATCTTTCCAAGCTTATAGAAGGATCTTTCCTCAGAACTGCTAGTATTAGAAGCGTCGCCATTGCCCTCTCCTTTCTGATCATG
TCGCTGTCGATGCTTGCAACCTCCGCCTCCACCCAGTCGAAGGGCGTCACCGCCTCTCTCCTTCTGCAGCTGCAAGTGGTGGTGGAGTTAGCAAATGACCCAAAACTTGT
ATATCATCGTGGATTGGCACCACAAAAGCTACTTGGACTGGTGGAAAACAATCCTTTTATTGCAGTTGAAGTTCTAAAGAAATTGATTAATTCCCCTGAAATTGCAGAGT
ACTTTACTGTTCTTGTTAACATGGACATGAGTTTACACTCTATGGAAGTTGTAAACGGGCTAAGGACAACTTTTGAACTTCCCTCTAAGTTCATACACATGTACATCGCT
AATTGTATATCATTGTGTGAGGGCATTACAGAGTCCAAAATTGCGATTGAAATGTGCCCACATCTAAAAAAGGAAGAAGTTAGCGGAGCAAAGGACCAGAAGATATGCAC
CCACATCGCAAGGAAAAAAAAAATCTCACTAAGTACAGGAGGAAAATATGTGGAAATGTGCCACAAATATGCCCGCAAATTGAGAAGGAAAGAGGGCCCAAGTTTACGGC
AAACTGTTGTGACTCTTCAGCAAAAACAATATTATCAGCGGGATCCTCCCGGAACTTCAGATTTTTTGGAATATGTTTCAACTCCAATGAAGCTCTACCGATTAAGCGCT
AGGCAATTGACTATCCCTAGTTCAACTACTAGCATTCACCAACTCATAATGGCCTAA
Protein sequenceShow/hide protein sequence
MVFSLTAKFVISRICSWMVREPSNLMLVNVLISVPAGGLSVDSYCEQFSQISQNSLSLSVFAIVDLILLAKVIRINIKLNLFDLSKLIEGSFLRTASIRSVAIALSFLIM
SLSMLATSASTQSKGVTASLLLQLQVVVELANDPKLVYHRGLAPQKLLGLVENNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSMEVVNGLRTTFELPSKFIHMYIA
NCISLCEGITESKIAIEMCPHLKKEEVSGAKDQKICTHIARKKKISLSTGGKYVEMCHKYARKLRRKEGPSLRQTVVTLQQKQYYQRDPPGTSDFLEYVSTPMKLYRLSA
RQLTIPSSTTSIHQLIMA