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Lag0035239 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035239
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptiontranscription factor TCP19
Genome locationchr3:17323222..17323999
RNA-Seq ExpressionLag0035239
SyntenyLag0035239
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK22268.1 transcription factor TCP19 [Cucumis melo var. makuwa]7.7e-0875.56Show/hide
Query:  MNPDLQFGGVVPVLARAITNSSSGLESGSSPAIVFPSLIPASASA
        MNP LQFGGVVPVL RA++N SSGLESGSSPA+V  SLIP + SA
Subjt:  MNPDLQFGGVVPVLARAITNSSSGLESGSSPAIVFPSLIPASASA
XP_004150306.1 transcription factor TCP19 [Cucumis sativus]7.7e-0875.56Show/hide
Query:  MNPDLQFGGVVPVLARAITNSSSGLESGSSPAIVFPSLIPASASA
        MNP LQFGGVVPVL RA++N SSGLESGSSPA+V  SLIP + SA
Subjt:  MNPDLQFGGVVPVLARAITNSSSGLESGSSPAIVFPSLIPASASA
XP_008439154.1 PREDICTED: transcription factor TCP19 [Cucumis melo]9.1e-0977.78Show/hide
Query:  MNPDLQFGGVVPVLARAITNSSSGLESGSSPAIVFPSLIPASASA
        MNP LQFGGVVPVL RA++N SSGLESGSSPA+V PSLIP + SA
Subjt:  MNPDLQFGGVVPVLARAITNSSSGLESGSSPAIVFPSLIPASASA
XP_022141192.1 transcription factor TCP9 [Momordica charantia]3.5e-0873.33Show/hide
Query:  MNPDLQFGGVVPVLARAITNSSSGLESGSSPAIVFPSLIPASASA
        MNP LQFGGVVPVL RA++N SSGLESGSSP++V P LIPA+ +A
Subjt:  MNPDLQFGGVVPVLARAITNSSSGLESGSSPAIVFPSLIPASASA
XP_038877943.1 transcription factor TCP19 [Benincasa hispida]2.7e-0877.78Show/hide
Query:  MNPDLQFGGVVPVLARAITNSSSGLESGSSPAIVFPSLIPASASA
        MNP LQFGGVVPVLARA++NS+SGLESGSSPAIV  +L P++ASA
Subjt:  MNPDLQFGGVVPVLARAITNSSSGLESGSSPAIVFPSLIPASASA
TrEMBL top hitse value%identityAlignment
A0A0A0L8J7 TCP domain-containing protein3.7e-0875.56Show/hide
Query:  MNPDLQFGGVVPVLARAITNSSSGLESGSSPAIVFPSLIPASASA
        MNP LQFGGVVPVL RA++N SSGLESGSSPA+V  SLIP + SA
Subjt:  MNPDLQFGGVVPVLARAITNSSSGLESGSSPAIVFPSLIPASASA
A0A1S3AYR7 transcription factor TCP194.4e-0977.78Show/hide
Query:  MNPDLQFGGVVPVLARAITNSSSGLESGSSPAIVFPSLIPASASA
        MNP LQFGGVVPVL RA++N SSGLESGSSPA+V PSLIP + SA
Subjt:  MNPDLQFGGVVPVLARAITNSSSGLESGSSPAIVFPSLIPASASA
A0A5A7SW02 Transcription factor TCP194.4e-0977.78Show/hide
Query:  MNPDLQFGGVVPVLARAITNSSSGLESGSSPAIVFPSLIPASASA
        MNP LQFGGVVPVL RA++N SSGLESGSSPA+V PSLIP + SA
Subjt:  MNPDLQFGGVVPVLARAITNSSSGLESGSSPAIVFPSLIPASASA
A0A5D3DFN7 Transcription factor TCP193.7e-0875.56Show/hide
Query:  MNPDLQFGGVVPVLARAITNSSSGLESGSSPAIVFPSLIPASASA
        MNP LQFGGVVPVL RA++N SSGLESGSSPA+V  SLIP + SA
Subjt:  MNPDLQFGGVVPVLARAITNSSSGLESGSSPAIVFPSLIPASASA
A0A6J1CJ67 transcription factor TCP91.7e-0873.33Show/hide
Query:  MNPDLQFGGVVPVLARAITNSSSGLESGSSPAIVFPSLIPASASA
        MNP LQFGGVVPVL RA++N SSGLESGSSP++V P LIPA+ +A
Subjt:  MNPDLQFGGVVPVLARAITNSSSGLESGSSPAIVFPSLIPASASA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCCCGATTTGCAATTTGGGGGTGTAGTGCCAGTTCTAGCCAGAGCTATTACAAACAGTTCAAGTGGATTGGAAAGTGGATCTTCGCCGGCGATCGTTTTCCCGAG
TTTGATTCCAGCAAGTGCCAGTGCTCGGCGAGCACGAGTGCAGCGTCTTCCACCGGTCGCCGACGCCACGCTGGCGACGGGCGGCGGCCGGCTGTCTCCGACGGCCGGTG
GTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCCCGATTTGCAATTTGGGGGTGTAGTGCCAGTTCTAGCCAGAGCTATTACAAACAGTTCAAGTGGATTGGAAAGTGGATCTTCGCCGGCGATCGTTTTCCCGAG
TTTGATTCCAGCAAGTGCCAGTGCTCGGCGAGCACGAGTGCAGCGTCTTCCACCGGTCGCCGACGCCACGCTGGCGACGGGCGGCGGCCGGCTGTCTCCGACGGCCGGTG
GTTGA
Protein sequenceShow/hide protein sequence
MNPDLQFGGVVPVLARAITNSSSGLESGSSPAIVFPSLIPASASARRARVQRLPPVADATLATGGGRLSPTAGG