; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035244 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035244
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like
Genome locationchr3:17379328..17380704
RNA-Seq ExpressionLag0035244
SyntenyLag0035244
Gene Ontology termsGO:0005524 - ATP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588286.1 Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.0e-4481.82Show/hide
Query:  MVSMSGSVFFPFTVPNCSSRSPKLAVRDAHNSFCFKKRDQRRIVCNCVAPPPYFNRDGSSAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEKH
        MVS+SGSVFFP TVP+CSSRS K+AV D HNSFC KK+DQRRIVCNC+APPP+F  DGSS VN NDSF SEHLS DNED+DESDVLIECRNVYKSFGEKH
Subjt:  MVSMSGSVFFPFTVPNCSSRSPKLAVRDAHNSFCFKKRDQRRIVCNCVAPPPYFNRDGSSAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEKH

Query:  ILRGVSFKFQ
        ILRGVSFK +
Subjt:  ILRGVSFKFQ

KAG7020848.1 Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.3e-4479.13Show/hide
Query:  MVSMSGSVFFPFTVPNCSSRSPKLAVRDAHNSFCFKKRDQRRIVCNCVAPPPYFNRDGSSAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEKH
        MVS+SGSVFFP TVP+CSSRS K+AV D HNSFC KK+DQRRIVCNC+APPP+F  DGSS VN NDSF SEHLS DNED+DESDVLIECRNVYKSFGEKH
Subjt:  MVSMSGSVFFPFTVPNCSSRSPKLAVRDAHNSFCFKKRDQRRIVCNCVAPPPYFNRDGSSAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEKH

Query:  ILRGVSFKFQMHFSA
        ILRGVSFK  + ++A
Subjt:  ILRGVSFKFQMHFSA

XP_023520683.1 protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like [Cucurbita pepo subsp. pepo]3.0e-4481.82Show/hide
Query:  MVSMSGSVFFPFTVPNCSSRSPKLAVRDAHNSFCFKKRDQRRIVCNCVAPPPYFNRDGSSAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEKH
        MVS+SGSVFFP TVP+CSSRS K+AV D HNSFC KK+DQRRIVCNC+APPP+F  DGSS VN NDSF SEHLS DNED+DESDVLIECRNVYKSFGEKH
Subjt:  MVSMSGSVFFPFTVPNCSSRSPKLAVRDAHNSFCFKKRDQRRIVCNCVAPPPYFNRDGSSAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEKH

Query:  ILRGVSFKFQ
        ILRGVSFK +
Subjt:  ILRGVSFKFQ

XP_038876767.1 protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic isoform X1 [Benincasa hispida]2.2e-4787.39Show/hide
Query:  MVSMSGSVFFPFTVPNCSSRSPKLAVRDAHNSFCFKKRDQRRI-VCNCVAPPPYFNRDGSSAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEK
        MVS+SGSVFFP TVPNCS+RS K+AV DAHNSFC KK+DQRRI VCNC+APPPYF  DGSSAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEK
Subjt:  MVSMSGSVFFPFTVPNCSSRSPKLAVRDAHNSFCFKKRDQRRI-VCNCVAPPPYFNRDGSSAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEK

Query:  HILRGVSFKFQ
        HILRGVSFK +
Subjt:  HILRGVSFKFQ

XP_038876768.1 protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic isoform X2 [Benincasa hispida]2.2e-4787.39Show/hide
Query:  MVSMSGSVFFPFTVPNCSSRSPKLAVRDAHNSFCFKKRDQRRI-VCNCVAPPPYFNRDGSSAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEK
        MVS+SGSVFFP TVPNCS+RS K+AV DAHNSFC KK+DQRRI VCNC+APPPYF  DGSSAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEK
Subjt:  MVSMSGSVFFPFTVPNCSSRSPKLAVRDAHNSFCFKKRDQRRI-VCNCVAPPPYFNRDGSSAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEK

Query:  HILRGVSFKFQ
        HILRGVSFK +
Subjt:  HILRGVSFKFQ

TrEMBL top hitse value%identityAlignment
A0A0A0LY39 ABC transporter domain-containing protein6.1e-4381.98Show/hide
Query:  MVSMSGSVFFPFTVPNCSSRSPKLAVRDAHNSFCFKKRDQRRIV-CNCVAPPPYFNRDGSSAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEK
        MVS+SGSVFFP TVP+CSSRS K+AV DAHNSFC K +DQRRIV CNC+APPPYF  D SSAVNSNDSFRSEHLS +NEDK+ESDVLIECRNV+KSFGEK
Subjt:  MVSMSGSVFFPFTVPNCSSRSPKLAVRDAHNSFCFKKRDQRRIV-CNCVAPPPYFNRDGSSAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEK

Query:  HILRGVSFKFQ
        HILRGVSFK +
Subjt:  HILRGVSFKFQ

A0A1S3B8N5 protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic isoform X13.2e-4483.78Show/hide
Query:  MVSMSGSVFFPFTVPNCSSRSPKLAVRDAHNSFCFKKRDQRRIV-CNCVAPPPYFNRDGSSAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEK
        MVS+SGSVFFP TVPNCSSRS K+AV DAHNSFC K +DQRRIV CNC+APPPYF  D SSAVNSNDSFRSEHLS +NEDKDESDVLIECRNV+KSFGEK
Subjt:  MVSMSGSVFFPFTVPNCSSRSPKLAVRDAHNSFCFKKRDQRRIV-CNCVAPPPYFNRDGSSAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEK

Query:  HILRGVSFKFQ
        HILRGVSFK +
Subjt:  HILRGVSFKFQ

A0A6J1CBM2 protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic1.3e-4280Show/hide
Query:  MVSMSGSVFFPFTVPNCSSRSPKLAVRDAHNSFCFKKRDQRRIVCNCVAPPPYFNRDGSSAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEKH
        MVS+SGSV FP T PNCSS S K+AV DA NSFCFKK++QRRIVCNC+APPPYF  D SSAVNSNDSFRSE+L PDNE +DESDVLIECR+VYKSFGEKH
Subjt:  MVSMSGSVFFPFTVPNCSSRSPKLAVRDAHNSFCFKKRDQRRIVCNCVAPPPYFNRDGSSAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEKH

Query:  ILRGVSFKFQ
        ILRGVSFK +
Subjt:  ILRGVSFKFQ

A0A6J1F2M5 protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like9.3e-4480.91Show/hide
Query:  MVSMSGSVFFPFTVPNCSSRSPKLAVRDAHNSFCFKKRDQRRIVCNCVAPPPYFNRDGSSAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEKH
        MVS+SGSVFFP TVP+CSSRS K+AV D HNSFC KK+DQRRIVCNC+APPP+F  DGSS VN NDSF SEHLS DNE +DESDVLIECRNVYKSFGEKH
Subjt:  MVSMSGSVFFPFTVPNCSSRSPKLAVRDAHNSFCFKKRDQRRIVCNCVAPPPYFNRDGSSAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEKH

Query:  ILRGVSFKFQ
        ILRGVSFK +
Subjt:  ILRGVSFKFQ

A0A6J1KHV9 protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like7.9e-4378.95Show/hide
Query:  MVSMSGSVFFPFTVPNCSSRSPKLAVRDAHNSFCFKKRDQRRIVCNCVAPPPYFNRDGSSAVNSNDSFRSEHLSPDN----EDKDESDVLIECRNVYKSF
        MVS+SGSVFFP TVP+CSSRS K+AV D HNSFC KK+DQRRIVCNC+APPP+F  DGSS VN NDSF SEHLS DN    ED+DESDVLIECRNVYKSF
Subjt:  MVSMSGSVFFPFTVPNCSSRSPKLAVRDAHNSFCFKKRDQRRIVCNCVAPPPYFNRDGSSAVNSNDSFRSEHLSPDN----EDKDESDVLIECRNVYKSF

Query:  GEKHILRGVSFKFQ
        GEKHILRGVSFK +
Subjt:  GEKHILRGVSFKFQ

SwissProt top hitse value%identityAlignment
Q9AT00 Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic2.5e-0937.74Show/hide
Query:  NCSSRSPKLAVRDAH-------NSFCFKKRD----QRRIVCNCVAPPPYFNRDGSSAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEKHILRG
        +CSS S  L     H        S    +R     +R++ C C+APP   + D +   +   S     +  +   +++SDVLIECR+VYKSFGEKHIL+G
Subjt:  NCSSRSPKLAVRDAH-------NSFCFKKRD----QRRIVCNCVAPPPYFNRDGSSAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEKHILRG

Query:  VSFKFQ
        VSFK +
Subjt:  VSFKFQ

Arabidopsis top hitse value%identityAlignment
AT1G65410.1 non-intrinsic ABC protein 111.8e-1037.74Show/hide
Query:  NCSSRSPKLAVRDAH-------NSFCFKKRD----QRRIVCNCVAPPPYFNRDGSSAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEKHILRG
        +CSS S  L     H        S    +R     +R++ C C+APP   + D +   +   S     +  +   +++SDVLIECR+VYKSFGEKHIL+G
Subjt:  NCSSRSPKLAVRDAH-------NSFCFKKRD----QRRIVCNCVAPPPYFNRDGSSAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEKHILRG

Query:  VSFKFQ
        VSFK +
Subjt:  VSFKFQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCTATGTCGGGTTCGGTGTTCTTTCCATTTACAGTACCCAATTGTTCCTCTCGATCGCCTAAACTGGCTGTTCGTGATGCGCACAATTCGTTTTGTTTTAAGAA
AAGGGACCAGAGAAGGATTGTTTGTAATTGCGTTGCGCCTCCGCCGTACTTCAATCGTGATGGGTCATCTGCCGTCAATTCCAATGATTCATTTAGATCAGAACATTTAA
GCCCAGATAACGAGGATAAAGATGAGTCTGATGTTCTCATTGAGTGTAGAAATGTCTACAAATCCTTTGGAGAAAAGCATATATTGAGAGGTGTGAGCTTCAAGTTCCAA
ATGCATTTTTCTGCTAGTAGTGAGCTTCTTTTGAGCCTTTATGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTCTATGTCGGGTTCGGTGTTCTTTCCATTTACAGTACCCAATTGTTCCTCTCGATCGCCTAAACTGGCTGTTCGTGATGCGCACAATTCGTTTTGTTTTAAGAA
AAGGGACCAGAGAAGGATTGTTTGTAATTGCGTTGCGCCTCCGCCGTACTTCAATCGTGATGGGTCATCTGCCGTCAATTCCAATGATTCATTTAGATCAGAACATTTAA
GCCCAGATAACGAGGATAAAGATGAGTCTGATGTTCTCATTGAGTGTAGAAATGTCTACAAATCCTTTGGAGAAAAGCATATATTGAGAGGTGTGAGCTTCAAGTTCCAA
ATGCATTTTTCTGCTAGTAGTGAGCTTCTTTTGAGCCTTTATGGATGA
Protein sequenceShow/hide protein sequence
MVSMSGSVFFPFTVPNCSSRSPKLAVRDAHNSFCFKKRDQRRIVCNCVAPPPYFNRDGSSAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEKHILRGVSFKFQ
MHFSASSELLLSLYG