; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035256 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035256
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposable element protein
Genome locationchr3:17572335..17574984
RNA-Seq ExpressionLag0035256
SyntenyLag0035256
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023521407.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111785222 [Cucurbita pepo subsp. pepo]1.8e-5368Show/hide
Query:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKIYKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKS
        MSPY+LV+GKACHLPLELEHK FWALKKLNFD ++ G +R +QL+EL+EFR+ +YENAK+YKEK K+WHD KIRPKEF KGQ+VLL+NSRLKLFPGKLKS
Subjt:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKIYKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKS

Query:  KWSGPFVVIEVFPHGAVTLQDEKDGRVFKVNGQRVKHYWGEEFQSKYPSL
        +WSGPF+V EV P+GA+T++   + R F VNGQR+K Y G E +    SL
Subjt:  KWSGPFVVIEVFPHGAVTLQDEKDGRVFKVNGQRVKHYWGEEFQSKYPSL

XP_023522102.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111785979 [Cucurbita pepo subsp. pepo]1.1e-5368.67Show/hide
Query:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKIYKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKS
        MSPY+LV+GKACHLPLELEHK FWALKKLNFD ++ G +R +QL+ELEEFR+ +YENAK+YKEK K+WHD KIRPKEF KGQ+VLL+NSRLKLFPGKLKS
Subjt:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKIYKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKS

Query:  KWSGPFVVIEVFPHGAVTLQDEKDGRVFKVNGQRVKHYWGEEFQSKYPSL
        +WSGPF+V EV P+GA+T++   + R F VNGQR+K Y G E +    SL
Subjt:  KWSGPFVVIEVFPHGAVTLQDEKDGRVFKVNGQRVKHYWGEEFQSKYPSL

XP_030478524.1 uncharacterized protein LOC115695608 [Cannabis sativa]7.5e-5571.83Show/hide
Query:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKIYKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKS
        MSPYRLVYGKACHLP+ELEHK FWA+KKLNFDL +AG  R+LQL+ELEE R FSYENAK+YKEK K WHDK+I+ + F +GQ+VLL+NSRLKLFPGKLKS
Subjt:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKIYKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKS

Query:  KWSGPFVVIEVFPHGAVTLQDEKDGRVFKVNGQRVKHYWGEE
        +WSGPF +++V+P GAV +++E+ GRVF+VNGQR+KHY G E
Subjt:  KWSGPFVVIEVFPHGAVTLQDEKDGRVFKVNGQRVKHYWGEE

XP_030498087.1 uncharacterized protein LOC115713746 [Cannabis sativa]1.3e-5471.83Show/hide
Query:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKIYKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKS
        MSPYRLVYGKACHLP+ELEHK FWA+KKLNFDL +AG  R+LQL+ELEE R FSYENAK+YKEK K WHDK+I+ + F +GQ+VLL+NSRLKLFPGKLKS
Subjt:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKIYKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKS

Query:  KWSGPFVVIEVFPHGAVTLQDEKDGRVFKVNGQRVKHYWGEE
         WSGPF +++V+P GAV +++E+ GRVF+VNGQR+KHY G E
Subjt:  KWSGPFVVIEVFPHGAVTLQDEKDGRVFKVNGQRVKHYWGEE

XP_030505229.1 uncharacterized protein LOC115720213 [Cannabis sativa]2.8e-5467.74Show/hide
Query:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKIYKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKS
        MSPYRLVYGKACHLP+ELEH+ FWALK LNFDLS+ G  + LQL+EL+E R F+YENAK+YKEK+K WHD +I+ + FVK Q+VLL+NSRLKLFPGKLKS
Subjt:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKIYKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKS

Query:  KWSGPFVVIEVFPHGAVTLQDEKDGRVFKVNGQRVKHYWGEEF--QSKYPSLRDV
        +WSGPF V+EV+P  AV ++DEK  R FKVNGQR+K+YWGEE   +    SL+DV
Subjt:  KWSGPFVVIEVFPHGAVTLQDEKDGRVFKVNGQRVKHYWGEEF--QSKYPSLRDV

TrEMBL top hitse value%identityAlignment
A0A1B5Z879 Reverse transcriptase (Fragment)3.2e-5166Show/hide
Query:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKIYKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKS
        MSP+++VYGKACHLPLELEHK  WA K LNFDL  AG  R+LQL EL+EFR+++YENAKI+KEK K WHDKKI+ +EF +GQ VLL+NSRLKLFPGKLKS
Subjt:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKIYKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKS

Query:  KWSGPFVVIEVFPHGAVTLQDEKDGRVFKVNGQRVKHYWGEEFQSKYPSL
        +WSGPF V +VFP+GA+ ++D    R FKVNGQR+K Y+G EF+    S+
Subjt:  KWSGPFVVIEVFPHGAVTLQDEKDGRVFKVNGQRVKHYWGEEFQSKYPSL

A0A2G9FWY3 Reverse transcriptase3.7e-5265.33Show/hide
Query:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKIYKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKS
        MSPYRLV+GKACHLP+ELEH  +WA++KLNFD+ +AG  R+LQL+EL+EFR  +YENAKIYKEK K WH+KKI  + F  GQ VLL+NSRLKLFPGKLKS
Subjt:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKIYKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKS

Query:  KWSGPFVVIEVFPHGAVTLQDEKDGRVFKVNGQRVKHYWGEEFQSKYPSL
        +WSGPF + EVFPHGAV L+++     FKVN QR+KHYWGE    ++ S+
Subjt:  KWSGPFVVIEVFPHGAVTLQDEKDGRVFKVNGQRVKHYWGEEFQSKYPSL

A0A2G9HBV9 DNA-directed DNA polymerase4.1e-5165.33Show/hide
Query:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKIYKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKS
        MSPY+LV+GKACHLP+ELEH  +WA++KLNFD+ +AG  R+LQL+EL+EFR  +YENAKIYKEK K WHDKKI  + F  GQ VLL+NSRLKLFPGKLKS
Subjt:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKIYKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKS

Query:  KWSGPFVVIEVFPHGAVTLQDEKDGRVFKVNGQRVKHYWGEEFQSKYPSL
        +WSGPF V EVF HGAV L++E     FKVN QR+KHYWG      + S+
Subjt:  KWSGPFVVIEVFPHGAVTLQDEKDGRVFKVNGQRVKHYWGEEFQSKYPSL

A0A2K3NJZ5 Integrase catalytic domain-containing protein (Fragment)1.4e-5169.72Show/hide
Query:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKIYKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKS
        MSP+++VYGK+CHLPLELEHK  WA K LNFDLS AG  R+LQL EL+EFR+F+YENAKI+KEK K WHDKKI+ +EF +GQ VLL+NSRLKLFPGKLKS
Subjt:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKIYKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKS

Query:  KWSGPFVVIEVFPHGAVTLQDEKDGRVFKVNGQRVKHYWGEE
        +WSGPF + +VFPHGAV L+D    + FKVNGQR+K Y+G+E
Subjt:  KWSGPFVVIEVFPHGAVTLQDEKDGRVFKVNGQRVKHYWGEE

A0A3Q7XQS1 LOW QUALITY PROTEIN: uncharacterized protein LOC1137841291.5e-5373.94Show/hide
Query:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKIYKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKS
        MSPY++VYGKACHLPLELEH+ FWA K LNFDL  AG  R+LQL+ELEEFR+F+YENAKIYKEK K WHDKKI+ KEF +G+ VLL+NSRLKLFPGKLKS
Subjt:  MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKIYKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKS

Query:  KWSGPFVVIEVFPHGAVTLQDEKDGRVFKVNGQRVKHYWGEE
        KWSGPF V +VFPHGAV L+D      FKVNGQR+K Y+GEE
Subjt:  KWSGPFVVIEVFPHGAVTLQDEKDGRVFKVNGQRVKHYWGEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCCCTATCGGTTGGTATACGGGAAAGCTTGTCATTTACCATTAGAGCTGGAACATAAAACGTTTTGGGCTTTGAAAAAGTTGAATTTTGATCTGAGTAGTGCAGG
AGCAATGCGAATGCTGCAGCTCAGCGAATTGGAAGAATTTCGCCACTTTTCTTATGAGAATGCGAAAATTTATAAAGAAAAGATTAAGTTGTGGCATGACAAGAAAATTA
GACCTAAAGAATTTGTCAAAGGTCAAAAAGTTTTGCTTTATAATTCTAGATTAAAATTGTTTCCTGGGAAACTAAAGTCCAAATGGTCAGGTCCGTTTGTTGTGATTGAG
GTTTTCCCCCATGGAGCAGTTACTTTGCAAGATGAAAAAGATGGGAGAGTATTCAAGGTGAATGGTCAGCGTGTCAAGCATTATTGGGGAGAGGAGTTTCAGTCAAAATA
TCCTTCCCTAAGGGATGTTGCCACATGTCGTGAAGGGCAATCCAACGAGGCGGAAGAACAGGAAAAAGTGACAGAGGATGAGGCTGCTGCAGTGGTTGAAGAAAACCTGG
AAGAACTGCAAGAACAGACCCCAGGAGAGGCTGATCAGAGACTTGCGGATACAGATACGGCTCGAGAGGAAAATGTTGAGGAGAATCAAGAACAGCAGGCTGAGATGGTG
AGAGACGAGCAGGTAGACGCAGTGTCTGAAAAAGGAAACAGCAGTGGTGATCTTCCACAGTTTCTGAGGACCGGTATTGCAGATCACGACTGGGAGCTGTTTTGTGCGAA
GCCGGAATCTGTAAATGCACATGTGGTGCGTGAATTTTATGCTAACATTGTCAAGGAGGATGGTTTCCAGATGGCTGTGGCGCCATCTGATGAGCAACTAAGTGAGGTTG
TAAGGGAGGTAGGAATTGAAGGGGCACAGTGGCAGTTATCCAAGACTCAGAAGAGGACATTCCAGTCGGCTTATTTGAAAAGGGAAGCAACACATGGATGGGATTTATTA
GACAGAAGATGCTTCCAACAACACATGACTCGACAATCTCCAGGGAACGGAAGAGCAGGGGTTCCGGTGGATGAGGGAGATGTGATCCTGTTTGATAAGGGGATCATAGA
CACGCCCAATTTGGCACGGCTCCAGCGTGTGCAGGAGGAGTTTGCTGAAAGGCAAACTTTAACCTTCTGGAACTATGTTAAGAATCGGGATGCCAGCTTGAAGAAGGCGC
TGCAAGAGAATTTTTCAAAACCTTATCCAGCCCTTCCAGCATTCCCTGACGATCTGTTGAACCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTCCCTATCGGTTGGTATACGGGAAAGCTTGTCATTTACCATTAGAGCTGGAACATAAAACGTTTTGGGCTTTGAAAAAGTTGAATTTTGATCTGAGTAGTGCAGG
AGCAATGCGAATGCTGCAGCTCAGCGAATTGGAAGAATTTCGCCACTTTTCTTATGAGAATGCGAAAATTTATAAAGAAAAGATTAAGTTGTGGCATGACAAGAAAATTA
GACCTAAAGAATTTGTCAAAGGTCAAAAAGTTTTGCTTTATAATTCTAGATTAAAATTGTTTCCTGGGAAACTAAAGTCCAAATGGTCAGGTCCGTTTGTTGTGATTGAG
GTTTTCCCCCATGGAGCAGTTACTTTGCAAGATGAAAAAGATGGGAGAGTATTCAAGGTGAATGGTCAGCGTGTCAAGCATTATTGGGGAGAGGAGTTTCAGTCAAAATA
TCCTTCCCTAAGGGATGTTGCCACATGTCGTGAAGGGCAATCCAACGAGGCGGAAGAACAGGAAAAAGTGACAGAGGATGAGGCTGCTGCAGTGGTTGAAGAAAACCTGG
AAGAACTGCAAGAACAGACCCCAGGAGAGGCTGATCAGAGACTTGCGGATACAGATACGGCTCGAGAGGAAAATGTTGAGGAGAATCAAGAACAGCAGGCTGAGATGGTG
AGAGACGAGCAGGTAGACGCAGTGTCTGAAAAAGGAAACAGCAGTGGTGATCTTCCACAGTTTCTGAGGACCGGTATTGCAGATCACGACTGGGAGCTGTTTTGTGCGAA
GCCGGAATCTGTAAATGCACATGTGGTGCGTGAATTTTATGCTAACATTGTCAAGGAGGATGGTTTCCAGATGGCTGTGGCGCCATCTGATGAGCAACTAAGTGAGGTTG
TAAGGGAGGTAGGAATTGAAGGGGCACAGTGGCAGTTATCCAAGACTCAGAAGAGGACATTCCAGTCGGCTTATTTGAAAAGGGAAGCAACACATGGATGGGATTTATTA
GACAGAAGATGCTTCCAACAACACATGACTCGACAATCTCCAGGGAACGGAAGAGCAGGGGTTCCGGTGGATGAGGGAGATGTGATCCTGTTTGATAAGGGGATCATAGA
CACGCCCAATTTGGCACGGCTCCAGCGTGTGCAGGAGGAGTTTGCTGAAAGGCAAACTTTAACCTTCTGGAACTATGTTAAGAATCGGGATGCCAGCTTGAAGAAGGCGC
TGCAAGAGAATTTTTCAAAACCTTATCCAGCCCTTCCAGCATTCCCTGACGATCTGTTGAACCCCTAG
Protein sequenceShow/hide protein sequence
MSPYRLVYGKACHLPLELEHKTFWALKKLNFDLSSAGAMRMLQLSELEEFRHFSYENAKIYKEKIKLWHDKKIRPKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFVVIE
VFPHGAVTLQDEKDGRVFKVNGQRVKHYWGEEFQSKYPSLRDVATCREGQSNEAEEQEKVTEDEAAAVVEENLEELQEQTPGEADQRLADTDTAREENVEENQEQQAEMV
RDEQVDAVSEKGNSSGDLPQFLRTGIADHDWELFCAKPESVNAHVVREFYANIVKEDGFQMAVAPSDEQLSEVVREVGIEGAQWQLSKTQKRTFQSAYLKREATHGWDLL
DRRCFQQHMTRQSPGNGRAGVPVDEGDVILFDKGIIDTPNLARLQRVQEEFAERQTLTFWNYVKNRDASLKKALQENFSKPYPALPAFPDDLLNP