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Lag0035268 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035268
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:17749288..17750132
RNA-Seq ExpressionLag0035268
SyntenyLag0035268
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6667347.1 hypothetical protein CIPAW_01G094800 [Carya illinoinensis]1.2e-2040.67Show/hide
Query:  YSSLHVDWEILESCGASRGIVLVWDSRVISPIEVVKGCFSVSMSFQSRDDKVRWV-SRVYGAHRQKD----------------------GDFNVIHSPLE
        +S +HVDW  L S GAS GIV++WD RV+  +E   G ++V+ SF+S  D   W  + VYGA+  KD                      GDFNV+  P E
Subjt:  YSSLHVDWEILESCGASRGIVLVWDSRVISPIEVVKGCFSVSMSFQSRDDKVRWV-SRVYGAHRQKD----------------------GDFNVIHSPLE

Query:  KSLERRMTRSMKAFNDFIEGCGLVDPPLLNGKFTWANSKARSRIDRFLFS
         S  RR+  +M+AF++ I    LVD PL  G  TW+N+++ SR+DRFL S
Subjt:  KSLERRMTRSMKAFNDFIEGCGLVDPPLLNGKFTWANSKARSRIDRFLFS

RVX05721.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]7.3e-2140.79Show/hide
Query:  YSSLHVDWEILESCGASRGIVLVWDSRVISPIEVVKGCFSVSMSFQSRDDKVRWVSRVYGAHR---QKD-------------------GDFNVIHSPLEK
        ++   V+W  L +CGASRGIV++WDS     IE V G FSV++ F S ++   W++ VYG      +KD                   GDFNVI    EK
Subjt:  YSSLHVDWEILESCGASRGIVLVWDSRVISPIEVVKGCFSVSMSFQSRDDKVRWVSRVYGAHR---QKD-------------------GDFNVIHSPLEK

Query:  SLERRMTRSMKAFNDFIEGCGLVDPPLLNGKFTWANSKAR---SRIDRFLFS
          E ++T +M+ F++FI   GL+DPPL N  FTW+N +A     R+DRFLFS
Subjt:  SLERRMTRSMKAFNDFIEGCGLVDPPLLNGKFTWANSKAR---SRIDRFLFS

XP_023873314.1 uncharacterized protein LOC111985902 [Quercus suber]7.3e-2140.27Show/hide
Query:  HVDWEILESCGASRGIVLVWDSRVISPIEVVKGCFSVSMSFQSRDDKVRWV-SRVYGAHRQKD----------------------GDFNVIHSPLEKSLE
        HVDW  L SCGAS G++L+WD+RV++ +E   G FSVS  F S  D+  W    VYG +  +D                      GDFNV+  P E+   
Subjt:  HVDWEILESCGASRGIVLVWDSRVISPIEVVKGCFSVSMSFQSRDDKVRWV-SRVYGAHRQKD----------------------GDFNVIHSPLEKSLE

Query:  RRMTRSMKAFNDFIEGCGLVDPPLLNGKFTWANSK---ARSRIDRFLFS
           T +M+ F++FI   GL+D PL  G FTW+NS+   +++R+DRFLFS
Subjt:  RRMTRSMKAFNDFIEGCGLVDPPLLNGKFTWANSK---ARSRIDRFLFS

XP_023874416.1 uncharacterized protein LOC111986955 [Quercus suber]1.6e-2039.6Show/hide
Query:  HVDWEILESCGASRGIVLVWDSRVISPIEVVKGCFSVSMSFQSRDDKVRWV-SRVYGAHRQKD----------------------GDFNVIHSPLEKSLE
        HVDW  L SCGAS G++L+WD+RV++ +E   G FSVS  F S  D+  W  + VYG +  +D                      GDFNV+  P E+S  
Subjt:  HVDWEILESCGASRGIVLVWDSRVISPIEVVKGCFSVSMSFQSRDDKVRWV-SRVYGAHRQKD----------------------GDFNVIHSPLEKSLE

Query:  RRMTRSMKAFNDFIEGCGLVDPPLLNGKFTWANSK---ARSRIDRFLFS
             +M+ F++FI   GL+D PL  G FTW+N++   +++R+DRFLFS
Subjt:  RRMTRSMKAFNDFIEGCGLVDPPLLNGKFTWANSK---ARSRIDRFLFS

XP_030970526.1 uncharacterized protein LOC115990899 [Quercus lobata]2.1e-2043.18Show/hide
Query:  HVDWEILESCGASRGIVLVWDSRVISPIEVVKGCFSVSMSFQSRDDKVRW-----VSRVYGAHRQKDGDFNVIHSPLEKSLERRMTRSMKAFNDFIEGCG
        HVDW  L SCGASRG++L+WD+RV+  +E   G FSVS    S D +  W     +S  +       GDFNV+  P E++     T +M+ F++FI   G
Subjt:  HVDWEILESCGASRGIVLVWDSRVISPIEVVKGCFSVSMSFQSRDDKVRW-----VSRVYGAHRQKDGDFNVIHSPLEKSLERRMTRSMKAFNDFIEGCG

Query:  LVDPPLLNGKFTWANSK---ARSRIDRFLFSK
        L+D PL  G FTW+NS+   +++R+DRFLFS+
Subjt:  LVDPPLLNGKFTWANSK---ARSRIDRFLFSK

TrEMBL top hitse value%identityAlignment
A0A2N9EIH5 Uncharacterized protein3.8e-2342.48Show/hide
Query:  YSSLHVDWEILESCGASRGIVLVWDSRVISPIEVVKGCFSVSMSFQSRDDKVRWV-SRVYGAHRQKD----------------------GDFNVIHSPLE
        +S+   DW+ LES GAS GI+L+WD+RV    + VKG FS+S  F++  D+  W  S VYG +   D                      GDFNV+  P E
Subjt:  YSSLHVDWEILESCGASRGIVLVWDSRVISPIEVVKGCFSVSMSFQSRDDKVRWV-SRVYGAHRQKD----------------------GDFNVIHSPLE

Query:  KSLERRMTRSMKAFNDFIEGCGLVDPPLLNGKFTWANSK---ARSRIDRFLFS
        K    R+TR+M +F+DFI   GL+D PLL G+FTW+N++   ++SRIDRFL S
Subjt:  KSLERRMTRSMKAFNDFIEGCGLVDPPLLNGKFTWANSK---ARSRIDRFLFS

A0A2N9EJ52 Reverse transcriptase domain-containing protein1.9e-2242.48Show/hide
Query:  YSSLHVDWEILESCGASRGIVLVWDSRVISPIEVVKGCFSVSMSFQSRDDKVRWV-SRVYGAHRQKD----------------------GDFNVIHSPLE
        +S+  VDW+ LES GAS GI+L+WD+RV    + VKG FS+S  F++  D+  W  S VYG +   D                      GDFNV+  P E
Subjt:  YSSLHVDWEILESCGASRGIVLVWDSRVISPIEVVKGCFSVSMSFQSRDDKVRWV-SRVYGAHRQKD----------------------GDFNVIHSPLE

Query:  KSLERRMTRSMKAFNDFIEGCGLVDPPLLNGKFTWANSK---ARSRIDRFLFS
        K    R+T +M  F+DFI   GLVD PLL G+FTW+N++   ++SR+DRFL S
Subjt:  KSLERRMTRSMKAFNDFIEGCGLVDPPLLNGKFTWANSK---ARSRIDRFLFS

A0A2N9H054 Reverse transcriptase domain-containing protein1.9e-2242.48Show/hide
Query:  YSSLHVDWEILESCGASRGIVLVWDSRVISPIEVVKGCFSVSMSFQSRDDKVRWV-SRVYGAHRQKD----------------------GDFNVIHSPLE
        +S+   DW+ LES GAS GI+L+WD+RV    + VKG FS+S  F++  D+  W  S VYG +   D                      GDFNV+  P E
Subjt:  YSSLHVDWEILESCGASRGIVLVWDSRVISPIEVVKGCFSVSMSFQSRDDKVRWV-SRVYGAHRQKD----------------------GDFNVIHSPLE

Query:  KSLERRMTRSMKAFNDFIEGCGLVDPPLLNGKFTWANSK---ARSRIDRFLFS
        K    R+T +M  F+DFI   GLVD PLL+G+FTW+N++   ++SRIDRFL S
Subjt:  KSLERRMTRSMKAFNDFIEGCGLVDPPLLNGKFTWANSK---ARSRIDRFLFS

A0A2N9H421 Uncharacterized protein2.4e-2242.28Show/hide
Query:  HVDWEILESCGASRGIVLVWDSRVISPIEVVKGCFSVSMSFQSRDDKVRWV-SRVYGAHRQKD----------------------GDFNVIHSPLEKSLE
        +VDW  L S GAS GI+L+WD RV+  +E   G +SVS  F++  D+  W+ S VYG +   +                      GDFNV+  P EKS  
Subjt:  HVDWEILESCGASRGIVLVWDSRVISPIEVVKGCFSVSMSFQSRDDKVRWV-SRVYGAHRQKD----------------------GDFNVIHSPLEKSLE

Query:  RRMTRSMKAFNDFIEGCGLVDPPLLNGKFTWANSK---ARSRIDRFLFS
           T++M  F+DFI   GL+D PLL GKFTW+N +   ARSR+DRFLF+
Subjt:  RRMTRSMKAFNDFIEGCGLVDPPLLNGKFTWANSK---ARSRIDRFLFS

A0A2N9J0U5 Reverse transcriptase domain-containing protein8.4e-2342.48Show/hide
Query:  YSSLHVDWEILESCGASRGIVLVWDSRVISPIEVVKGCFSVSMSFQSRDDKVRWV-SRVYGAHRQKD----------------------GDFNVIHSPLE
        +S+   DW+ LES GAS GI+L+WD+RV    + VKG FS+S  F++  D   W  S VYG +   D                      GDFNV+  P E
Subjt:  YSSLHVDWEILESCGASRGIVLVWDSRVISPIEVVKGCFSVSMSFQSRDDKVRWV-SRVYGAHRQKD----------------------GDFNVIHSPLE

Query:  KSLERRMTRSMKAFNDFIEGCGLVDPPLLNGKFTWANSK---ARSRIDRFLFS
        K    R+TR+M  F+DFI   GL+D PLL G+FTW+N++   ++SRIDRFL S
Subjt:  KSLERRMTRSMKAFNDFIEGCGLVDPPLLNGKFTWANSK---ARSRIDRFLFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTCTTATTGGGCAATGGTCGTCGGGATGGGCTGCACTAGCCTCCGTGGGTATCCAAGCTATTCTAGCCTGCATGTGGATTGGGAGATTTTGGAATCTTGTGGAGC
CTCGAGAGGTATTGTGTTGGTCTGGGATAGCAGGGTGATATCCCCAATTGAGGTGGTTAAGGGTTGCTTTTCGGTGTCCATGTCCTTTCAGTCTAGAGATGATAAGGTGA
GGTGGGTGTCAAGGGTGTATGGGGCCCATAGGCAGAAAGATGGGGACTTCAACGTCATACACTCTCCTTTAGAGAAATCCTTGGAAAGGAGGATGACTAGATCTATGAAA
GCGTTTAATGATTTCATCGAGGGGTGTGGCTTGGTTGATCCTCCTCTGTTGAATGGGAAGTTCACTTGGGCTAATAGCAAAGCGCGTAGCAGAATTGATCGTTTTTTGTT
CTCGAAGGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGTCTTATTGGGCAATGGTCGTCGGGATGGGCTGCACTAGCCTCCGTGGGTATCCAAGCTATTCTAGCCTGCATGTGGATTGGGAGATTTTGGAATCTTGTGGAGC
CTCGAGAGGTATTGTGTTGGTCTGGGATAGCAGGGTGATATCCCCAATTGAGGTGGTTAAGGGTTGCTTTTCGGTGTCCATGTCCTTTCAGTCTAGAGATGATAAGGTGA
GGTGGGTGTCAAGGGTGTATGGGGCCCATAGGCAGAAAGATGGGGACTTCAACGTCATACACTCTCCTTTAGAGAAATCCTTGGAAAGGAGGATGACTAGATCTATGAAA
GCGTTTAATGATTTCATCGAGGGGTGTGGCTTGGTTGATCCTCCTCTGTTGAATGGGAAGTTCACTTGGGCTAATAGCAAAGCGCGTAGCAGAATTGATCGTTTTTTGTT
CTCGAAGGGTTAG
Protein sequenceShow/hide protein sequence
MGSYWAMVVGMGCTSLRGYPSYSSLHVDWEILESCGASRGIVLVWDSRVISPIEVVKGCFSVSMSFQSRDDKVRWVSRVYGAHRQKDGDFNVIHSPLEKSLERRMTRSMK
AFNDFIEGCGLVDPPLLNGKFTWANSKARSRIDRFLFSKG