; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035276 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035276
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description(1->3)-beta-glucan endohydrolase
Genome locationchr3:17917768..17919798
RNA-Seq ExpressionLag0035276
SyntenyLag0035276
Gene Ontology termsGO:0016798 - hydrolase activity, acting on glycosyl bonds (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043333.1 glucan endo-1,3-beta-glucosidase, basic isoform-like [Cucumis melo var. makuwa]7.2e-0450Show/hide
Query:  MQLYNPTTQFVVDNSLPLLVNLYPYLSYINKPSTALSYALLQGRRLLL
        + + NPT +F++DN+ PLLVNLYPY SY+  PS  L YA+  G  L++
Subjt:  MQLYNPTTQFVVDNSLPLLVNLYPYLSYINKPSTALSYALLQGRRLLL
XP_008459107.1 PREDICTED: glucan endo-1,3-beta-glucosidase, basic isoform-like [Cucumis melo]7.2e-0450Show/hide
Query:  MQLYNPTTQFVVDNSLPLLVNLYPYLSYINKPSTALSYALLQGRRLLL
        + + NPT +F++DN+ PLLVNLYPY SY+  PS  L YA+  G  L++
Subjt:  MQLYNPTTQFVVDNSLPLLVNLYPYLSYINKPSTALSYALLQGRRLLL
XP_038895085.1 glucan endo-1,3-beta-glucosidase, basic isoform-like [Benincasa hispida]3.2e-0444.64Show/hide
Query:  NQSNIGRTIMQLYNPTTQFVVDNSLPLLVNLYPYLSYINKPSTALSYALLQGRRLL
        +Q +     + + NPT +F++DNS PLLVNLYPY SY+  P   L YA+  G  L+
Subjt:  NQSNIGRTIMQLYNPTTQFVVDNSLPLLVNLYPYLSYINKPSTALSYALLQGRRLL
TrEMBL top hitse value%identityAlignment
A0A1S3C9Z3 (1->3)-beta-glucan endohydrolase3.5e-0450Show/hide
Query:  MQLYNPTTQFVVDNSLPLLVNLYPYLSYINKPSTALSYALLQGRRLLL
        + + NPT +F++DN+ PLLVNLYPY SY+  PS  L YA+  G  L++
Subjt:  MQLYNPTTQFVVDNSLPLLVNLYPYLSYINKPSTALSYALLQGRRLLL
A0A5D3BSK7 (1->3)-beta-glucan endohydrolase3.5e-0450Show/hide
Query:  MQLYNPTTQFVVDNSLPLLVNLYPYLSYINKPSTALSYALLQGRRLLL
        + + NPT +F++DN+ PLLVNLYPY SY+  PS  L YA+  G  L++
Subjt:  MQLYNPTTQFVVDNSLPLLVNLYPYLSYINKPSTALSYALLQGRRLLL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTGGACCCAATCAAGCTAGGCCAGAAAGAGAAGTGAAGACCTTTGAGTCCAAAAGGTGTTTGGGCTTCCAGGAGTCGTTCCCTTTGGCCTGTGGGAGCTTTAATCACCG
GGCTTGGGTCCGCAGACGAACGATACAGGTCACGTCTTCCTCGTCTTCTACAAATTCACTGTTGGTGTCACGTGAAGGTGCTAATCTGCCATTATTCCAACCAGAAGTTG
CCAACCTTAATTATAATCAGAGCAACATTGGAAGAACAATAATGCAACTTTACAATCCGACCACACAGTTTGTTGTGGACAATAGCTTGCCATTGCTGGTCAACTTGTAC
CCTTACTTGAGTTATATCAACAAACCTAGTACGGCTCTCAGCTATGCACTTTTACAAGGACGTCGGCTGTTGCTGATGGCAAATTTGTTCATCAAAATTTGTTCCATGTC
GTTTTGGACATGTGTTGTTTTGTTCTGTGTTGGACAAGTCCAATGCCGGAGGTTTTGGAGACTTTTGTATCCTACGGTGGTTGGCTGA
mRNA sequenceShow/hide mRNA sequence
TTTGGACCCAATCAAGCTAGGCCAGAAAGAGAAGTGAAGACCTTTGAGTCCAAAAGGTGTTTGGGCTTCCAGGAGTCGTTCCCTTTGGCCTGTGGGAGCTTTAATCACCG
GGCTTGGGTCCGCAGACGAACGATACAGGTCACGTCTTCCTCGTCTTCTACAAATTCACTGTTGGTGTCACGTGAAGGTGCTAATCTGCCATTATTCCAACCAGAAGTTG
CCAACCTTAATTATAATCAGAGCAACATTGGAAGAACAATAATGCAACTTTACAATCCGACCACACAGTTTGTTGTGGACAATAGCTTGCCATTGCTGGTCAACTTGTAC
CCTTACTTGAGTTATATCAACAAACCTAGTACGGCTCTCAGCTATGCACTTTTACAAGGACGTCGGCTGTTGCTGATGGCAAATTTGTTCATCAAAATTTGTTCCATGTC
GTTTTGGACATGTGTTGTTTTGTTCTGTGTTGGACAAGTCCAATGCCGGAGGTTTTGGAGACTTTTGTATCCTACGGTGGTTGGCTGA
Protein sequenceShow/hide protein sequence
FGPNQARPEREVKTFESKRCLGFQESFPLACGSFNHRAWVRRRTIQVTSSSSSTNSLLVSREGANLPLFQPEVANLNYNQSNIGRTIMQLYNPTTQFVVDNSLPLLVNLY
PYLSYINKPSTALSYALLQGRRLLLMANLFIKICSMSFWTCVVLFCVGQVQCRRFWRLLYPTVVG