; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035277 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035277
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr3:17920672..17921055
RNA-Seq ExpressionLag0035277
SyntenyLag0035277
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7808930.1 uncharacterized protein G2W53_035673 [Senna tora]2.5e-0635.19Show/hide
Query:  EAEAVLQGLRLARSLEVKCLTIVSDSRSLIQTLRNEVPCESCIATTLWDIKSVQTSFTKVDYGHVSRKYNRLAHKMARMGLQSTS-QLWLGNYSEWITRL
        EAEA+  GL LAR LE+  + +  D   ++  +R+ V   S + T L +IKS+ +SF+ V +  + R+ NR+A ++A +G    S Q+WL NY   I  +
Subjt:  EAEAVLQGLRLARSLEVKCLTIVSDSRSLIQTLRNEVPCESCIATTLWDIKSVQTSFTKVDYGHVSRKYNRLAHKMARMGLQSTS-QLWLGNYSEWITRL

Query:  SLLEQNMF
          L+  +F
Subjt:  SLLEQNMF

VAH31913.1 unnamed protein product [Triticum turgidum subsp. durum]6.6e-0729.17Show/hide
Query:  NLLTEEAEAVLQGLRLARSLEVKCLTIVSDSRSLIQTLRNEVPCESCIATTLWDIKSVQTSFTKVDYGHVSRKYNRLAHKMARMGLQSTSQLWLGNYSEW
        ++L+ EA A+  GL LA+S+    + + SD+  LI+ ++NE P     A    D  S+++ F +V Y H +R+ N + H++A++    TS++W+ +    
Subjt:  NLLTEEAEAVLQGLRLARSLEVKCLTIVSDSRSLIQTLRNEVPCESCIATTLWDIKSVQTSFTKVDYGHVSRKYNRLAHKMARMGLQSTSQLWLGNYSEW

Query:  ITRLSLLEQNMFVPHQEIFF
        I  L + +  +   ++E+FF
Subjt:  ITRLSLLEQNMFVPHQEIFF

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.1e-0431.73Show/hide
Query:  LTEEAEAVLQGLRLARSLEVKCLTIVSDSRSLIQTLRNEVPCESCIATTLWDIKSVQTSFTKVDYGHVSRKYNRLAHKMARMGLQSTS--QLWLGNYSEW
        L  E   +L+GL+ A +     L + SDS   IQ +RNE+         + +I+++   F  + + H SR+ NR AH +A+ G+ S S    WL N+  W
Subjt:  LTEEAEAVLQGLRLARSLEVKCLTIVSDSRSLIQTLRNEVPCESCIATTLWDIKSVQTSFTKVDYGHVSRKYNRLAHKMARMGLQSTS--QLWLGNYSEW

Query:  ITRL
        +  L
Subjt:  ITRL

XP_024036832.1 LRR receptor-like serine/threonine-protein kinase IOS1 [Citrus clementina]8.1e-0540.22Show/hide
Query:  EAEAVLQGLRLARSLEVKCLTIVSDSRSLIQTLRNEVPCESCIATTLWDIKSVQTSFTKVDYGHVSRKYNRLAHKMARMGLQSTSQ-LWLGN
        EAEAVL GL+LARS +V  L I SD   ++Q + N     S I  T+  I++   +F KV   H+ R  N  AH +A+  +   S  +WLGN
Subjt:  EAEAVLQGLRLARSLEVKCLTIVSDSRSLIQTLRNEVPCESCIATTLWDIKSVQTSFTKVDYGHVSRKYNRLAHKMARMGLQSTSQ-LWLGN

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]6.2e-0540.22Show/hide
Query:  EAEAVLQGLRLARSLEVKCLTIVSDSRSLIQTLRNEVPCESCIATTLWDIKSVQTSFTKVDYGHVSRKYNRLAHKMARMGLQSTSQ-LWLGN
        EAEAVL GL+LAR+ +V  L I SD   ++Q + N     S I  T+  I++    F KV   H+ R  N  AH +A++ L   S  +WLGN
Subjt:  EAEAVLQGLRLARSLEVKCLTIVSDSRSLIQTLRNEVPCESCIATTLWDIKSVQTSFTKVDYGHVSRKYNRLAHKMARMGLQSTSQ-LWLGN

TrEMBL top hitse value%identityAlignment
A0A2N9H705 Uncharacterized protein2.3e-0532.38Show/hide
Query:  NLLTEEAEAVLQGLRLARSLEVKCLTIVSDSRSLIQTLRNEVPCESCIATTLWDIKSVQTSFTKVDYGHVSRKYNRLAHKMARMGLQS-TSQLWLGNYSE
        ++L   A AVL GL+ A  + ++C+ +  +S+ L+  L+   PC + +   + DI  ++ SFT + +  VS+  N++AH +A   L S T+Q+WL +Y  
Subjt:  NLLTEEAEAVLQGLRLARSLEVKCLTIVSDSRSLIQTLRNEVPCESCIATTLWDIKSVQTSFTKVDYGHVSRKYNRLAHKMARMGLQS-TSQLWLGNYSE

Query:  WITRL
         I  L
Subjt:  WITRL

A0A2N9J6Y2 Uncharacterized protein1.9e-0435.16Show/hide
Query:  EAEAVLQGLRLARSLEVKCLTIVSDSRSLIQTLRNEVPCESCIATTLWDIKSVQTSFTKVDYGHVSRKYNRLAHKMARMGLQSTSQ--LWL
        EA A    L+LA  + ++ + +  DS  +I  L+++  C +     +WDI+ + TSF  V+YGHV R+ N  AH +AR  L  +S   +WL
Subjt:  EAEAVLQGLRLARSLEVKCLTIVSDSRSLIQTLRNEVPCESCIATTLWDIKSVQTSFTKVDYGHVSRKYNRLAHKMARMGLQSTSQ--LWL

A0A445C8Y7 Uncharacterized protein4.3e-0431.73Show/hide
Query:  EAEAVLQGLRLARSLEVKCLTIVSDSRSLIQTLRNEVPCESCIATTLWDIKSVQTSFTKVDYGHVSRKYNRLAHKMARMGLQSTSQLWLGNYSEWITRLS
        EA A L GL  AR      + + SD+  +IQ+LR +    +  +T + D   +  SF  V++ HV R  NR+AH++A M L + + +W+    + I  L+
Subjt:  EAEAVLQGLRLARSLEVKCLTIVSDSRSLIQTLRNEVPCESCIATTLWDIKSVQTSFTKVDYGHVSRKYNRLAHKMARMGLQSTSQLWLGNYSEWITRLS

Query:  LLEQ
         L++
Subjt:  LLEQ

A0A446L2X3 Uncharacterized protein3.2e-0729.17Show/hide
Query:  NLLTEEAEAVLQGLRLARSLEVKCLTIVSDSRSLIQTLRNEVPCESCIATTLWDIKSVQTSFTKVDYGHVSRKYNRLAHKMARMGLQSTSQLWLGNYSEW
        ++L+ EA A+  GL LA+S+    + + SD+  LI+ ++NE P     A    D  S+++ F +V Y H +R+ N + H++A++    TS++W+ +    
Subjt:  NLLTEEAEAVLQGLRLARSLEVKCLTIVSDSRSLIQTLRNEVPCESCIATTLWDIKSVQTSFTKVDYGHVSRKYNRLAHKMARMGLQSTSQLWLGNYSEW

Query:  ITRLSLLEQNMFVPHQEIFF
        I  L + +  +   ++E+FF
Subjt:  ITRLSLLEQNMFVPHQEIFF

A0A6J1DX30 uncharacterized protein LOC1110248745.1e-0531.73Show/hide
Query:  LTEEAEAVLQGLRLARSLEVKCLTIVSDSRSLIQTLRNEVPCESCIATTLWDIKSVQTSFTKVDYGHVSRKYNRLAHKMARMGLQSTS--QLWLGNYSEW
        L  E   +L+GL+ A +     L + SDS   IQ +RNE+         + +I+++   F  + + H SR+ NR AH +A+ G+ S S    WL N+  W
Subjt:  LTEEAEAVLQGLRLARSLEVKCLTIVSDSRSLIQTLRNEVPCESCIATTLWDIKSVQTSFTKVDYGHVSRKYNRLAHKMARMGLQSTS--QLWLGNYSEW

Query:  ITRL
        +  L
Subjt:  ITRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTCTTCGACCGGCATAAATCTATTGACTGAGGAAGCAGAGGCGGTGTTACAAGGGCTTAGGCTAGCAAGGTCTTTAGAGGTGAAGTGTTTGACGATTGTGTCCGA
TTCTCGATCATTAATACAAACTCTTCGGAATGAAGTTCCCTGCGAATCTTGTATTGCCACTACTTTGTGGGATATCAAGTCTGTTCAAACCTCCTTCACGAAGGTGGATT
ACGGACATGTCAGCCGTAAGTATAATAGACTTGCCCATAAGATGGCACGGATGGGTCTGCAATCTACGTCACAGTTATGGTTAGGGAACTATTCTGAGTGGATAACTAGA
CTTTCGCTTCTGGAGCAGAATATGTTTGTACCCCATCAGGAAATTTTTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCTCTTCGACCGGCATAAATCTATTGACTGAGGAAGCAGAGGCGGTGTTACAAGGGCTTAGGCTAGCAAGGTCTTTAGAGGTGAAGTGTTTGACGATTGTGTCCGA
TTCTCGATCATTAATACAAACTCTTCGGAATGAAGTTCCCTGCGAATCTTGTATTGCCACTACTTTGTGGGATATCAAGTCTGTTCAAACCTCCTTCACGAAGGTGGATT
ACGGACATGTCAGCCGTAAGTATAATAGACTTGCCCATAAGATGGCACGGATGGGTCTGCAATCTACGTCACAGTTATGGTTAGGGAACTATTCTGAGTGGATAACTAGA
CTTTCGCTTCTGGAGCAGAATATGTTTGTACCCCATCAGGAAATTTTTTTTTGA
Protein sequenceShow/hide protein sequence
MISSTGINLLTEEAEAVLQGLRLARSLEVKCLTIVSDSRSLIQTLRNEVPCESCIATTLWDIKSVQTSFTKVDYGHVSRKYNRLAHKMARMGLQSTSQLWLGNYSEWITR
LSLLEQNMFVPHQEIFF