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Lag0035301 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035301
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionvesicle-associated protein 4-1-like
Genome locationchr3:18317552..18317947
RNA-Seq ExpressionLag0035301
SyntenyLag0035301
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024870.1 Vesicle-associated protein 4-1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-1459.26Show/hide
Query:  VSVLMSRVVVECHKPLFEVKLFRLCPIWQLRNTFSSSSSIHNLHHSGHDPSERNSTTSNNIKFPSSSKTVSFMVKSLLPPR
        V VLM+  V + HKP  +VK FRLC IWQ  NT SSS S  N+HH+ + P +RNST SNN+K  SSS TVS + KSLLPPR
Subjt:  VSVLMSRVVVECHKPLFEVKLFRLCPIWQLRNTFSSSSSIHNLHHSGHDPSERNSTTSNNIKFPSSSKTVSFMVKSLLPPR

XP_022937296.1 vesicle-associated protein 4-1-like [Cucurbita moschata]1.3e-1358.44Show/hide
Query:  MSRVVVECHKPLFEVKLFRLCPIWQLRNTFSSSSSIHNLHHSGHDPSERNSTTSNNIKFPSSSKTVSFMVKSLLPPR
        M+  V + HKP  +VK FRLC IWQ  NT SSS S  N+HH+ + P +RNST SNN+K  SSS TVS + KSLLPPR
Subjt:  MSRVVVECHKPLFEVKLFRLCPIWQLRNTFSSSSSIHNLHHSGHDPSERNSTTSNNIKFPSSSKTVSFMVKSLLPPR

XP_022976559.1 vesicle-associated protein 4-1-like [Cucurbita maxima]1.4e-1562.34Show/hide
Query:  MSRVVVECHKPLFEVKLFRLCPIWQLRNTFSSSSSIHNLHHSGHDPSERNSTTSNNIKFPSSSKTVSFMVKSLLPPR
        M+  V + HKP  +VK FRLC IWQ  NT SSS S  N+HHS + P +RNST SNN+K  SSSKTVSF+ KSLLPPR
Subjt:  MSRVVVECHKPLFEVKLFRLCPIWQLRNTFSSSSSIHNLHHSGHDPSERNSTTSNNIKFPSSSKTVSFMVKSLLPPR

XP_023535121.1 vesicle-associated protein 4-1-like [Cucurbita pepo subsp. pepo]2.8e-1358.44Show/hide
Query:  MSRVVVECHKPLFEVKLFRLCPIWQLRNTFSSSSSIHNLHHSGHDPSERNSTTSNNIKFPSSSKTVSFMVKSLLPPR
        M   V + HKP  +VK FRLC IWQ  NT SSS S  N+HH+ + P +RNST SNN+K  SSS TVS + KSLLPPR
Subjt:  MSRVVVECHKPLFEVKLFRLCPIWQLRNTFSSSSSIHNLHHSGHDPSERNSTTSNNIKFPSSSKTVSFMVKSLLPPR

XP_038900245.1 vesicle-associated protein 4-1 [Benincasa hispida]2.1e-1665.38Show/hide
Query:  MSRVVVECHKPLFEVKLFRLCPIWQLRNT-FSSSSSIHNLHHSGHDPSERNSTTSNNIKFPSSSKTVSFMVKSLLPPR
        M+  V + HKP  ++KLFRLCPIWQ  NT  SSSSS  NLHHS H PS+RNST SNN+K  +SSKTVS + KSLLPPR
Subjt:  MSRVVVECHKPLFEVKLFRLCPIWQLRNT-FSSSSSIHNLHHSGHDPSERNSTTSNNIKFPSSSKTVSFMVKSLLPPR

TrEMBL top hitse value%identityAlignment
A0A5A7T1W8 Vesicle-associated protein 4-12.9e-1167.69Show/hide
Query:  EVKLFRLCPIWQLRNT-FSSSSSIHNLHHSGHDPSERNSTTSNNIKFPSSSKTVSFMVKSLLPPR
        +VKLFRLCPIWQ  NT  SSSSS HNLHH+ H PS+R     NN+K  SSSKTVS + KSLLPPR
Subjt:  EVKLFRLCPIWQLRNT-FSSSSSIHNLHHSGHDPSERNSTTSNNIKFPSSSKTVSFMVKSLLPPR

A0A5D3BAA2 Vesicle-associated protein 4-12.9e-1167.69Show/hide
Query:  EVKLFRLCPIWQLRNT-FSSSSSIHNLHHSGHDPSERNSTTSNNIKFPSSSKTVSFMVKSLLPPR
        +VKLFRLCPIWQ  NT  SSSSS HNLHH+ H PS+R     NN+K  SSSKTVS + KSLLPPR
Subjt:  EVKLFRLCPIWQLRNT-FSSSSSIHNLHHSGHDPSERNSTTSNNIKFPSSSKTVSFMVKSLLPPR

A0A6J1F9Z2 vesicle-associated protein 4-1-like6.2e-1458.44Show/hide
Query:  MSRVVVECHKPLFEVKLFRLCPIWQLRNTFSSSSSIHNLHHSGHDPSERNSTTSNNIKFPSSSKTVSFMVKSLLPPR
        M+  V + HKP  +VK FRLC IWQ  NT SSS S  N+HH+ + P +RNST SNN+K  SSS TVS + KSLLPPR
Subjt:  MSRVVVECHKPLFEVKLFRLCPIWQLRNTFSSSSSIHNLHHSGHDPSERNSTTSNNIKFPSSSKTVSFMVKSLLPPR

A0A6J1FIV4 vesicle-associated protein 4-1-like4.4e-1269.35Show/hide
Query:  KLFRLCPIWQLRNTFSSSSSIHNLHHSGHDPSERNSTTSNNIKFPSSSKTVSFMVKSLLPPR
        KLF LC +WQ  NT SSSSS  NLHHS H PS+RN T SNN+K  SSSKTVS + KSLLPPR
Subjt:  KLFRLCPIWQLRNTFSSSSSIHNLHHSGHDPSERNSTTSNNIKFPSSSKTVSFMVKSLLPPR

A0A6J1INV3 vesicle-associated protein 4-1-like6.6e-1662.34Show/hide
Query:  MSRVVVECHKPLFEVKLFRLCPIWQLRNTFSSSSSIHNLHHSGHDPSERNSTTSNNIKFPSSSKTVSFMVKSLLPPR
        M+  V + HKP  +VK FRLC IWQ  NT SSS S  N+HHS + P +RNST SNN+K  SSSKTVSF+ KSLLPPR
Subjt:  MSRVVVECHKPLFEVKLFRLCPIWQLRNTFSSSSSIHNLHHSGHDPSERNSTTSNNIKFPSSSKTVSFMVKSLLPPR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTAATTATGCATATTGGCAAGTCCTCTTGCGCATCACGAATCCTGAACTGGAAATTTTGGATACATTTGAAGATGTTGAATATGAAAGAAGTATCGTTGAAAATGT
TCTGTGTAATGGATGTCATGAATATTCTGTTGTTAGTGTTTTAATGTCCAGGGTTGTCGTCGAGTGTCACAAGCCACTCTTTGAGGTGAAACTCTTCAGGTTGTGTCCGA
TTTGGCAATTGAGGAATACTTTTTCTTCTTCGTCGTCGATTCATAACCTTCACCATAGTGGTCATGACCCTAGTGAAAGAAACTCAACGACGTCGAATAATATCAAATTT
CCATCGTCTTCCAAGACAGTGTCCTTTATGGTGAAGTCATTGTTGCCTCCTCGGCTTTGGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTAATTATGCATATTGGCAAGTCCTCTTGCGCATCACGAATCCTGAACTGGAAATTTTGGATACATTTGAAGATGTTGAATATGAAAGAAGTATCGTTGAAAATGT
TCTGTGTAATGGATGTCATGAATATTCTGTTGTTAGTGTTTTAATGTCCAGGGTTGTCGTCGAGTGTCACAAGCCACTCTTTGAGGTGAAACTCTTCAGGTTGTGTCCGA
TTTGGCAATTGAGGAATACTTTTTCTTCTTCGTCGTCGATTCATAACCTTCACCATAGTGGTCATGACCCTAGTGAAAGAAACTCAACGACGTCGAATAATATCAAATTT
CCATCGTCTTCCAAGACAGTGTCCTTTATGGTGAAGTCATTGTTGCCTCCTCGGCTTTGGCTTTGA
Protein sequenceShow/hide protein sequence
MCNYAYWQVLLRITNPELEILDTFEDVEYERSIVENVLCNGCHEYSVVSVLMSRVVVECHKPLFEVKLFRLCPIWQLRNTFSSSSSIHNLHHSGHDPSERNSTTSNNIKF
PSSSKTVSFMVKSLLPPRLWL