CuGenDBv2

Gene ID	Lag0035304
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	RNA polymerase II transcriptional coactivator KELP-like
Genome location	chr3:18372858..18373647
RNA-Seq Expression	Lag0035304
Synteny	Lag0035304
Gene Ontology terms	GO:0060261 - positive regulation of transcription initiation from RNA polymerase II promoter (biological process) GO:0005634 - nucleus (cellular component) GO:0005667 - transcription factor complex (cellular component) GO:0003677 - DNA binding (molecular function) GO:0003713 - transcription coactivator activity (molecular function)
InterPro domains	IPR003173 - Transcriptional coactivator p15 (PC4), C-terminal IPR009044 - ssDNA-binding transcriptional regulator IPR045125 - RNA polymerase II transcriptional coactivator Sub1/Tcp4-like

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004148989.1 RNA polymerase II transcriptional coactivator KELP [Cucumis sativus]

1.5e-19

71.08

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Query:  PLQGFVRQVVESFLHERSEEQPQEDAGDALAAKEKEYDGDDDDLV--LSSKRKVTIQDFKGKTLVSIREFIRKDEKDLPTSKG
        P +  VR VVESFL ERSE+ P++   DA AAKEKEYD D D +V  LSSKRKVTIQDF+GKTLVSIREF RKD KDLPT+KG
Subjt:  PLQGFVRQVVESFLHERSEEQPQEDAGDALAAKEKEYDGDDDDLV--LSSKRKVTIQDFKGKTLVSIREFIRKDEKDLPTSKG

XP_008451928.1 PREDICTED: RNA polymerase II transcriptional coactivator KELP [Cucumis melo]

4.8e-21

59.65

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Query:  QILRHGPNDRVQDSSPRLQGPRSRPLLI---PLQGFVRQVVESFLHERSEEQPQEDAGDALAAKEKEYDGDDDDLV--LSSKRKVTIQDFKGKTLVSIRE
        +IL     D + +S  R    +   L +   P +  VR VVESFL ERSE+QPQ+ A DA AAKEKEYD D D +V  LSSKRKVTIQDF+GKTLVSIRE
Subjt:  QILRHGPNDRVQDSSPRLQGPRSRPLLI---PLQGFVRQVVESFLHERSEEQPQEDAGDALAAKEKEYDGDDDDLV--LSSKRKVTIQDFKGKTLVSIRE

Query:  FIRKDEKDLPTSKG
        F RKD KDLPT+KG
Subjt:  FIRKDEKDLPTSKG

XP_022931551.1 RNA polymerase II transcriptional coactivator KELP-like [Cucurbita moschata]

5.6e-22

60.53

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Query:  QILRHGPNDRVQDSSPRLQGPRSRPLLI---PLQGFVRQVVESFLHERSEEQPQEDAGDALAAKEKEYDGDDDDLV--LSSKRKVTIQDFKGKTLVSIRE
        +IL     D + +S  R    +   L +   P +  VR+VVESFL ERSE+QPQE+A DA AAKEKEYD D D +V  LSSKRKVTIQDF+GKTLVSIRE
Subjt:  QILRHGPNDRVQDSSPRLQGPRSRPLLI---PLQGFVRQVVESFLHERSEEQPQEDAGDALAAKEKEYDGDDDDLV--LSSKRKVTIQDFKGKTLVSIRE

Query:  FIRKDEKDLPTSKG
        F RKD KDLPT+KG
Subjt:  FIRKDEKDLPTSKG

XP_022985429.1 RNA polymerase II transcriptional coactivator KELP-like isoform X3 [Cucurbita maxima]

2.4e-20

58.77

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Query:  QILRHGPNDRVQDSSPRLQGPRSRPLLI---PLQGFVRQVVESFLHERSEEQPQEDAGDALAAKEKEYDGDDDDLV--LSSKRKVTIQDFKGKTLVSIRE
        +IL     D + +S  R    +   L +   P +  VR+VVESFL +RSE+Q QE+A DA AAKEKEYD D D +V  LSSKRKVTIQDF+GKTLVSIRE
Subjt:  QILRHGPNDRVQDSSPRLQGPRSRPLLI---PLQGFVRQVVESFLHERSEEQPQEDAGDALAAKEKEYDGDDDDLV--LSSKRKVTIQDFKGKTLVSIRE

Query:  FIRKDEKDLPTSKG
        F RKD KDLPT+KG
Subjt:  FIRKDEKDLPTSKG

XP_038878439.1 RNA polymerase II transcriptional coactivator KELP-like [Benincasa hispida]

7.3e-22

60.53

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Query:  QILRHGPNDRVQDSSPRLQGPRSRPLLI---PLQGFVRQVVESFLHERSEEQPQEDAGDALAAKEKEYDGDDDDLV--LSSKRKVTIQDFKGKTLVSIRE
        +IL     D + +S  R    +   L +   P +  VR+VVESFL ERSEEQPQ+ A DA AAKEKEYD D D +V  LSSKRKVTIQDF+GKTLVSIRE
Subjt:  QILRHGPNDRVQDSSPRLQGPRSRPLLI---PLQGFVRQVVESFLHERSEEQPQEDAGDALAAKEKEYDGDDDDLV--LSSKRKVTIQDFKGKTLVSIRE

Query:  FIRKDEKDLPTSKG
        F RKD KDLPT+KG
Subjt:  FIRKDEKDLPTSKG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KZW5 Uncharacterized protein

7.4e-20

71.08

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Query:  PLQGFVRQVVESFLHERSEEQPQEDAGDALAAKEKEYDGDDDDLV--LSSKRKVTIQDFKGKTLVSIREFIRKDEKDLPTSKG
        P +  VR VVESFL ERSE+ P++   DA AAKEKEYD D D +V  LSSKRKVTIQDF+GKTLVSIREF RKD KDLPT+KG
Subjt:  PLQGFVRQVVESFLHERSEEQPQEDAGDALAAKEKEYDGDDDDLV--LSSKRKVTIQDFKGKTLVSIREFIRKDEKDLPTSKG

A0A1S3BS20 RNA polymerase II transcriptional coactivator KELP

2.3e-21

59.65

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Query:  QILRHGPNDRVQDSSPRLQGPRSRPLLI---PLQGFVRQVVESFLHERSEEQPQEDAGDALAAKEKEYDGDDDDLV--LSSKRKVTIQDFKGKTLVSIRE
        +IL     D + +S  R    +   L +   P +  VR VVESFL ERSE+QPQ+ A DA AAKEKEYD D D +V  LSSKRKVTIQDF+GKTLVSIRE
Subjt:  QILRHGPNDRVQDSSPRLQGPRSRPLLI---PLQGFVRQVVESFLHERSEEQPQEDAGDALAAKEKEYDGDDDDLV--LSSKRKVTIQDFKGKTLVSIRE

Query:  FIRKDEKDLPTSKG
        F RKD KDLPT+KG
Subjt:  FIRKDEKDLPTSKG

A0A5A7TPV6 RNA polymerase II transcriptional coactivator KELP

2.3e-21

59.65

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Query:  QILRHGPNDRVQDSSPRLQGPRSRPLLI---PLQGFVRQVVESFLHERSEEQPQEDAGDALAAKEKEYDGDDDDLV--LSSKRKVTIQDFKGKTLVSIRE
        +IL     D + +S  R    +   L +   P +  VR VVESFL ERSE+QPQ+ A DA AAKEKEYD D D +V  LSSKRKVTIQDF+GKTLVSIRE
Subjt:  QILRHGPNDRVQDSSPRLQGPRSRPLLI---PLQGFVRQVVESFLHERSEEQPQEDAGDALAAKEKEYDGDDDDLV--LSSKRKVTIQDFKGKTLVSIRE

Query:  FIRKDEKDLPTSKG
        F RKD KDLPT+KG
Subjt:  FIRKDEKDLPTSKG

A0A6J1ETY4 RNA polymerase II transcriptional coactivator KELP-like

2.7e-22

60.53

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Query:  QILRHGPNDRVQDSSPRLQGPRSRPLLI---PLQGFVRQVVESFLHERSEEQPQEDAGDALAAKEKEYDGDDDDLV--LSSKRKVTIQDFKGKTLVSIRE
        +IL     D + +S  R    +   L +   P +  VR+VVESFL ERSE+QPQE+A DA AAKEKEYD D D +V  LSSKRKVTIQDF+GKTLVSIRE
Subjt:  QILRHGPNDRVQDSSPRLQGPRSRPLLI---PLQGFVRQVVESFLHERSEEQPQEDAGDALAAKEKEYDGDDDDLV--LSSKRKVTIQDFKGKTLVSIRE

Query:  FIRKDEKDLPTSKG
        F RKD KDLPT+KG
Subjt:  FIRKDEKDLPTSKG

A0A6J1JD91 RNA polymerase II transcriptional coactivator KELP-like isoform X3

1.1e-20

58.77

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Query:  QILRHGPNDRVQDSSPRLQGPRSRPLLI---PLQGFVRQVVESFLHERSEEQPQEDAGDALAAKEKEYDGDDDDLV--LSSKRKVTIQDFKGKTLVSIRE
        +IL     D + +S  R    +   L +   P +  VR+VVESFL +RSE+Q QE+A DA AAKEKEYD D D +V  LSSKRKVTIQDF+GKTLVSIRE
Subjt:  QILRHGPNDRVQDSSPRLQGPRSRPLLI---PLQGFVRQVVESFLHERSEEQPQEDAGDALAAKEKEYDGDDDDLV--LSSKRKVTIQDFKGKTLVSIRE

Query:  FIRKDEKDLPTSKG
        F RKD KDLPT+KG
Subjt:  FIRKDEKDLPTSKG

SwissProt top hits

e value

%identity

Alignment

O65155 RNA polymerase II transcriptional coactivator KELP

8.5e-13

51.69

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Query:  QGFVRQVVESFL-------HERSEEQPQEDAGDALAAK-EKEYDGDDDDLV--LSSKRKVTIQDFKGKTLVSIREFIRKDEKDLPTSKG
        + FVR VVE FL       +E S+   +E+ GD    K  KE+D D D ++  LS KR+VTIQ+FKGK+LVSIRE+ +KD K+LPTSKG
Subjt:  QGFVRQVVESFL-------HERSEEQPQEDAGDALAAK-EKEYDGDDDDLV--LSSKRKVTIQDFKGKTLVSIREFIRKDEKDLPTSKG

Arabidopsis top hits

e value

%identity

Alignment

AT4G10920.1 transcriptional coactivator p15 (PC4) family protein (KELP)

6.0e-14

51.69

Show/hide

Query:  QGFVRQVVESFL-------HERSEEQPQEDAGDALAAK-EKEYDGDDDDLV--LSSKRKVTIQDFKGKTLVSIREFIRKDEKDLPTSKG
        + FVR VVE FL       +E S+   +E+ GD    K  KE+D D D ++  LS KR+VTIQ+FKGK+LVSIRE+ +KD K+LPTSKG
Subjt:  QGFVRQVVESFL-------HERSEEQPQEDAGDALAAK-EKEYDGDDDDLV--LSSKRKVTIQDFKGKTLVSIREFIRKDEKDLPTSKG

AT4G10920.2 transcriptional coactivator p15 (PC4) family protein (KELP)

6.0e-14

51.69

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Query:  QGFVRQVVESFL-------HERSEEQPQEDAGDALAAK-EKEYDGDDDDLV--LSSKRKVTIQDFKGKTLVSIREFIRKDEKDLPTSKG
        + FVR VVE FL       +E S+   +E+ GD    K  KE+D D D ++  LS KR+VTIQ+FKGK+LVSIRE+ +KD K+LPTSKG
Subjt:  QGFVRQVVESFL-------HERSEEQPQEDAGDALAAK-EKEYDGDDDDLV--LSSKRKVTIQDFKGKTLVSIREFIRKDEKDLPTSKG

Sequences

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CDS sequence

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ATGCATCTTCCCTCTTCTCCTTCAATTCAGTTTCCTCCTTTGATTTTCCTTTCTTCCTCATCTCCTTCATCATGTTGTATTCTTGCCCTTCGTGTTCTCTTGTTAATCGG
AGAATTTCGATATGGATTCCGAAATCCAACGCAAAATCGAGGAAGTCATCCGCAGAATTCTCAAATCCTCCGACATGGACCAAATGACCGAGTCCAAGATTCGAGCCCTC
GCCTCCAAGGACCTCGATCTCGACCTCTTCTAATCCCCTTACAAGGCTTTGTTCGCCAGGTTGTGGAATCCTTCCTCCATGAACGATCTGAAGAACAGCCACAAGAGGAC
GCCGGAGACGCCCTTGCTGCAAAGGAGAAGGAGTACGACGGCGACGACGACGATCTCGTTTTATCGAGCAAGAGGAAGGTGACTATTCAGGATTTTAAAGGGAAAACTCT
GGTTTCGATTAGGGAGTTCATTAGAAAGGATGAGAAAGACCTCCCAACGTCAAAAGGTTTTGTCTAA

mRNA sequence

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Protein sequence

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MHLPSSPSIQFPPLIFLSSSSPSSCCILALRVLLLIGEFRYGFRNPTQNRGSHPQNSQILRHGPNDRVQDSSPRLQGPRSRPLLIPLQGFVRQVVESFLHERSEEQPQED
AGDALAAKEKEYDGDDDDLVLSSKRKVTIQDFKGKTLVSIREFIRKDEKDLPTSKGFV

Lag0035304 (gene) of Sponge gourd (AG-4) v1 genome