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Lag0035305 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035305
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr3:18436709..18437158
RNA-Seq ExpressionLag0035305
SyntenyLag0035305
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4375842.1 hypothetical protein G4B88_026421 [Cannabis sativa]5.4e-0831.08Show/hide
Query:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRARKVFFGSLITQLCQRVKIVSGKDDERHFFKPTIDLSLIGKLQQNNIQKKDKDSTSQ
        +PT+HDST+S +R+ +LYCI+KG +IN+G +I  EI  C  +   K+FF  LIT+ C+   +    D++               + +  +   + D   +
Subjt:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRARKVFFGSLITQLCQRVKIVSGKDDERHFFKPTIDLSLIGKLQQNNIQKKDKDSTSQ

Query:  ATPPSGSNIASPSQDTPITGPSLSSKALAITYRQLDQIRENLKTYWAY
         T PS +  AS S+D P+       +AL        Q+ E L+T+W Y
Subjt:  ATPPSGSNIASPSQDTPITGPSLSSKALAITYRQLDQIRENLKTYWAY

MCI09484.1 hypothetical protein [Trifolium medium]3.0e-1133.11Show/hide
Query:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRARK--VFFGSLITQLCQRVKI-VSGKDDERHFFKPTIDLSLIGKLQQNNIQKKDKDS
        MPTTH+ T++  R++LL+CI+ G +IN+G II  EI+ C  K++ +  ++F  LIT+LC++  + VSG+D+    F+PT          Q  I+   K +
Subjt:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRARK--VFFGSLITQLCQRVKI-VSGKDDERHFFKPTIDLSLIGKLQQNNIQKKDKDS

Query:  TSQATPPSGSNIASPSQDTPITGPSLSSKALAITYRQLDQIRENLKTYWAY
        T +           P Q  P    S ++ + A+   +  + R+N+KTYWA+
Subjt:  TSQATPPSGSNIASPSQDTPITGPSLSSKALAITYRQLDQIRENLKTYWAY

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.7e-0936.11Show/hide
Query:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRARKVFFGSLITQLCQRVKIVSGKDDERHFFKPTIDLSLIGKL-QQNNIQKKDKDSTS
        +PTTH  T+S DR++LLY ++ G  IN+G +I  EI AC  +++  +FF SLITQLC+  +     ++E+      ID   + ++ Q+   +   + STS
Subjt:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRARKVFFGSLITQLCQRVKIVSGKDDERHFFKPTIDLSLIGKL-QQNNIQKKDKDSTS

Query:  QATPPSGS
        + T  S S
Subjt:  QATPPSGS

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]2.0e-0730.2Show/hide
Query:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRARKVFFGSLITQLCQRVKIVSGKDDERHFFKPTIDLSLIGKLQQNNIQKKDKDSTSQ
        +PTTH   +S DR++LL+ ++ G  IN+G +I  EI AC  ++   +FF SLIT+LC+    +   ++E+      ID   + ++ Q        +ST Q
Subjt:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRARKVFFGSLITQLCQRVKIVSGKDDERHFFKPTIDLSLIGKLQQNNIQKKDKDSTSQ

Query:  ATPPSGSNIASPSQDTPITGPSLSSKALAITYRQLDQIRENLKTYWAYA
           PS S  A+ S            KAL     Q +   +  + +WAY+
Subjt:  ATPPSGSNIASPSQDTPITGPSLSSKALAITYRQLDQIRENLKTYWAYA

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]7.5e-1035.92Show/hide
Query:  PTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRARKVFFGSLITQLCQRVKIVSGKDD---ERHFFKPTIDLSLIGKLQQNNIQKKDKDST
        PTTHDS+ISV++++LLYC++ G  IN+G ++   IL C ++R  K+FF SLI +L  +  +    DD   +    K TID+  + KL++ + + ++    
Subjt:  PTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRARKVFFGSLITQLCQRVKIVSGKDD---ERHFFKPTIDLSLIGKLQQNNIQKKDKDST

Query:  SQA
        ++A
Subjt:  SQA

TrEMBL top hitse value%identityAlignment
A0A2P5CEY2 Uncharacterized protein8.1e-1036.11Show/hide
Query:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRARKVFFGSLITQLCQRVKIVSGKDDERHFFKPTIDLSLIGKL-QQNNIQKKDKDSTS
        +PTTH  T+S DR++LLY ++ G  IN+G +I  EI AC  +++  +FF SLITQLC+  +     ++E+      ID   + ++ Q+   +   + STS
Subjt:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRARKVFFGSLITQLCQRVKIVSGKDDERHFFKPTIDLSLIGKL-QQNNIQKKDKDSTS

Query:  QATPPSGS
        + T  S S
Subjt:  QATPPSGS

A0A2P5DXM3 Uncharacterized protein9.9e-0830.2Show/hide
Query:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRARKVFFGSLITQLCQRVKIVSGKDDERHFFKPTIDLSLIGKLQQNNIQKKDKDSTSQ
        +PTTH   +S DR++LL+ ++ G  IN+G +I  EI AC  ++   +FF SLIT+LC+    +   ++E+      ID   + ++ Q        +ST Q
Subjt:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRARKVFFGSLITQLCQRVKIVSGKDDERHFFKPTIDLSLIGKLQQNNIQKKDKDSTSQ

Query:  ATPPSGSNIASPSQDTPITGPSLSSKALAITYRQLDQIRENLKTYWAYA
           PS S  A+ S            KAL     Q +   +  + +WAY+
Subjt:  ATPPSGSNIASPSQDTPITGPSLSSKALAITYRQLDQIRENLKTYWAYA

A0A392PCH7 Uncharacterized protein1.5e-1133.11Show/hide
Query:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRARK--VFFGSLITQLCQRVKI-VSGKDDERHFFKPTIDLSLIGKLQQNNIQKKDKDS
        MPTTH+ T++  R++LL+CI+ G +IN+G II  EI+ C  K++ +  ++F  LIT+LC++  + VSG+D+    F+PT          Q  I+   K +
Subjt:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRARK--VFFGSLITQLCQRVKI-VSGKDDERHFFKPTIDLSLIGKLQQNNIQKKDKDS

Query:  TSQATPPSGSNIASPSQDTPITGPSLSSKALAITYRQLDQIRENLKTYWAY
        T +           P Q  P    S ++ + A+   +  + R+N+KTYWA+
Subjt:  TSQATPPSGSNIASPSQDTPITGPSLSSKALAITYRQLDQIRENLKTYWAY

A0A7J6FZ22 Uncharacterized protein2.6e-0831.08Show/hide
Query:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRARKVFFGSLITQLCQRVKIVSGKDDERHFFKPTIDLSLIGKLQQNNIQKKDKDSTSQ
        +PT+HDST+S +R+ +LYCI+KG +IN+G +I  EI  C  +   K+FF  LIT+ C+   +    D++               + +  +   + D   +
Subjt:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRARKVFFGSLITQLCQRVKIVSGKDDERHFFKPTIDLSLIGKLQQNNIQKKDKDSTSQ

Query:  ATPPSGSNIASPSQDTPITGPSLSSKALAITYRQLDQIRENLKTYWAY
         T PS +  AS S+D P+       +AL        Q+ E L+T+W Y
Subjt:  ATPPSGSNIASPSQDTPITGPSLSSKALAITYRQLDQIRENLKTYWAY

A0A803Q715 Uncharacterized protein1.5e-0842.03Show/hide
Query:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRARKVFFGSLITQLCQRVKIVSGKDDE
        +PT+HDST+S +R+ +LYCI+KG +IN+G +I  EI  C  +   K+FF  LIT+ C+   +    D++
Subjt:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRARKVFFGSLITQLCQRVKIVSGKDDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACCACCCATGATAGCACGATATCAGTAGATAGAGTGATGTTACTCTATTGCATTATGAAGGGGTTGGAGATCAATATTGGGAGCATAATTAGGGATGAGATTCT
AGCCTGTGGAAGAAAACGAGCACGTAAAGTTTTCTTTGGATCACTCATCACCCAGCTTTGTCAAAGGGTGAAGATAGTTTCGGGCAAGGACGATGAGCGTCATTTCTTCA
AGCCGACCATTGACCTGTCCTTGATCGGGAAGCTGCAACAGAACAACATCCAGAAGAAAGATAAAGACTCCACATCTCAGGCTACTCCACCATCAGGGTCGAATATAGCT
TCTCCATCCCAGGACACTCCTATTACAGGGCCCTCTCTGTCATCGAAAGCCTTAGCCATTACCTACCGCCAGTTAGATCAAATCAGGGAAAACCTGAAGACATATTGGGC
ATATGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGCCAACCACCCATGATAGCACGATATCAGTAGATAGAGTGATGTTACTCTATTGCATTATGAAGGGGTTGGAGATCAATATTGGGAGCATAATTAGGGATGAGATTCT
AGCCTGTGGAAGAAAACGAGCACGTAAAGTTTTCTTTGGATCACTCATCACCCAGCTTTGTCAAAGGGTGAAGATAGTTTCGGGCAAGGACGATGAGCGTCATTTCTTCA
AGCCGACCATTGACCTGTCCTTGATCGGGAAGCTGCAACAGAACAACATCCAGAAGAAAGATAAAGACTCCACATCTCAGGCTACTCCACCATCAGGGTCGAATATAGCT
TCTCCATCCCAGGACACTCCTATTACAGGGCCCTCTCTGTCATCGAAAGCCTTAGCCATTACCTACCGCCAGTTAGATCAAATCAGGGAAAACCTGAAGACATATTGGGC
ATATGCATAG
Protein sequenceShow/hide protein sequence
MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRARKVFFGSLITQLCQRVKIVSGKDDERHFFKPTIDLSLIGKLQQNNIQKKDKDSTSQATPPSGSNIA
SPSQDTPITGPSLSSKALAITYRQLDQIRENLKTYWAYA