| GenBank top hits | e value | %identity | Alignment |
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| XP_022133415.1 RNA-binding protein 39 isoform X1 [Momordica charantia] | 9.1e-39 | 65.81 | Show/hide |
Query: MKEKKDMVEPEVDSERDQRTVFAYQRPLKAR---CLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQL
MKEKKDMVEPE D ERDQRTVFAYQ PLKA K+GK VRDVRLIMDRNSRRSKGV GQL
Subjt: MKEKKDMVEPEVDSERDQRTVFAYQRPLKAR---CLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQL
Query: LLGQPVMVKPSEAEKYLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHLIEI
LLGQPVMVKPSEAEK LVQSNTSGAS AGPYGAVDRKLYV NLHFNMTETHL EI
Subjt: LLGQPVMVKPSEAEKYLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHLIEI
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| XP_022133416.1 RNA-binding protein 39 isoform X2 [Momordica charantia] | 9.1e-39 | 65.81 | Show/hide |
Query: MKEKKDMVEPEVDSERDQRTVFAYQRPLKAR---CLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQL
MKEKKDMVEPE D ERDQRTVFAYQ PLKA K+GK VRDVRLIMDRNSRRSKGV GQL
Subjt: MKEKKDMVEPEVDSERDQRTVFAYQRPLKAR---CLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQL
Query: LLGQPVMVKPSEAEKYLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHLIEI
LLGQPVMVKPSEAEK LVQSNTSGAS AGPYGAVDRKLYV NLHFNMTETHL EI
Subjt: LLGQPVMVKPSEAEKYLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHLIEI
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| XP_038881755.1 RNA-binding protein 39 isoform X1 [Benincasa hispida] | 9.1e-39 | 65.81 | Show/hide |
Query: MKEKKDMVEPEVDSERDQRTVFAYQRPLKAR---CLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQL
MKEKKDMVEPE D ERDQRTVFAYQ PLKA K+GK VRDVRLIMDRNSRRSKGV GQL
Subjt: MKEKKDMVEPEVDSERDQRTVFAYQRPLKAR---CLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQL
Query: LLGQPVMVKPSEAEKYLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHLIEI
LLGQPVMVKPSEAEK LVQSNTSGAS AGPYGAVDRKLYV NLHFNMTETHL EI
Subjt: LLGQPVMVKPSEAEKYLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHLIEI
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| XP_038881757.1 RNA-binding protein 39 isoform X2 [Benincasa hispida] | 9.1e-39 | 65.81 | Show/hide |
Query: MKEKKDMVEPEVDSERDQRTVFAYQRPLKAR---CLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQL
MKEKKDMVEPE D ERDQRTVFAYQ PLKA K+GK VRDVRLIMDRNSRRSKGV GQL
Subjt: MKEKKDMVEPEVDSERDQRTVFAYQRPLKAR---CLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQL
Query: LLGQPVMVKPSEAEKYLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHLIEI
LLGQPVMVKPSEAEK LVQSNTSGAS AGPYGAVDRKLYV NLHFNMTETHL EI
Subjt: LLGQPVMVKPSEAEKYLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHLIEI
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| XP_038881758.1 probable RNA-binding protein 23 isoform X3 [Benincasa hispida] | 9.1e-39 | 65.81 | Show/hide |
Query: MKEKKDMVEPEVDSERDQRTVFAYQRPLKAR---CLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQL
MKEKKDMVEPE D ERDQRTVFAYQ PLKA K+GK VRDVRLIMDRNSRRSKGV GQL
Subjt: MKEKKDMVEPEVDSERDQRTVFAYQRPLKAR---CLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQL
Query: LLGQPVMVKPSEAEKYLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHLIEI
LLGQPVMVKPSEAEK LVQSNTSGAS AGPYGAVDRKLYV NLHFNMTETHL EI
Subjt: LLGQPVMVKPSEAEKYLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHLIEI
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J1BV17 RNA-binding protein 39 isoform X2 | 4.4e-39 | 65.81 | Show/hide |
Query: MKEKKDMVEPEVDSERDQRTVFAYQRPLKAR---CLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQL
MKEKKDMVEPE D ERDQRTVFAYQ PLKA K+GK VRDVRLIMDRNSRRSKGV GQL
Subjt: MKEKKDMVEPEVDSERDQRTVFAYQRPLKAR---CLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQL
Query: LLGQPVMVKPSEAEKYLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHLIEI
LLGQPVMVKPSEAEK LVQSNTSGAS AGPYGAVDRKLYV NLHFNMTETHL EI
Subjt: LLGQPVMVKPSEAEKYLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHLIEI
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| A0A6J1BV68 RNA-binding protein 39 isoform X1 | 4.4e-39 | 65.81 | Show/hide |
Query: MKEKKDMVEPEVDSERDQRTVFAYQRPLKAR---CLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQL
MKEKKDMVEPE D ERDQRTVFAYQ PLKA K+GK VRDVRLIMDRNSRRSKGV GQL
Subjt: MKEKKDMVEPEVDSERDQRTVFAYQRPLKAR---CLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQL
Query: LLGQPVMVKPSEAEKYLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHLIEI
LLGQPVMVKPSEAEK LVQSNTSGAS AGPYGAVDRKLYV NLHFNMTETHL EI
Subjt: LLGQPVMVKPSEAEKYLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHLIEI
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| A0A6J1BWL9 RNA-binding protein 39 isoform X3 | 4.4e-39 | 65.81 | Show/hide |
Query: MKEKKDMVEPEVDSERDQRTVFAYQRPLKAR---CLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQL
MKEKKDMVEPE D ERDQRTVFAYQ PLKA K+GK VRDVRLIMDRNSRRSKGV GQL
Subjt: MKEKKDMVEPEVDSERDQRTVFAYQRPLKAR---CLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQL
Query: LLGQPVMVKPSEAEKYLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHLIEI
LLGQPVMVKPSEAEK LVQSNTSGAS AGPYGAVDRKLYV NLHFNMTETHL EI
Subjt: LLGQPVMVKPSEAEKYLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHLIEI
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| A0A6J1KL78 RNA-binding protein 39-like isoform X1 | 9.8e-39 | 65.16 | Show/hide |
Query: MKEKKDMVEPEVDSERDQRTVFAYQRPLKAR---CLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQL
MK+KKDMVEPE D ERDQRTVFAYQ PLKA K+GK VRDVRLIMDRNSRRSKGV GQL
Subjt: MKEKKDMVEPEVDSERDQRTVFAYQRPLKAR---CLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQL
Query: LLGQPVMVKPSEAEKYLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHLIEI
LLGQPVMVKPSEAEK LVQSNTSGAS AGPYGAVDRKLYV NLHFNMTETHL EI
Subjt: LLGQPVMVKPSEAEKYLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHLIEI
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| A0A6J1KV94 RNA-binding protein 39-like isoform X2 | 9.8e-39 | 65.16 | Show/hide |
Query: MKEKKDMVEPEVDSERDQRTVFAYQRPLKAR---CLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQL
MK+KKDMVEPE D ERDQRTVFAYQ PLKA K+GK VRDVRLIMDRNSRRSKGV GQL
Subjt: MKEKKDMVEPEVDSERDQRTVFAYQRPLKAR---CLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQL
Query: LLGQPVMVKPSEAEKYLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHLIEI
LLGQPVMVKPSEAEK LVQSNTSGAS AGPYGAVDRKLYV NLHFNMTETHL EI
Subjt: LLGQPVMVKPSEAEKYLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHLIEI
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O13845 RNA-binding protein rsd1 | 2.0e-04 | 30.15 | Show/hide |
Query: DSERDQRTVFAYQ--RPLKARCLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQLLLGQPVMVKPSEA
+ ERD+RTVF Q L +R L F+ VRD +++ D+ S RSKGV G+ LLG PV+V+ +EA
Subjt: DSERDQRTVFAYQ--RPLKARCLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQLLLGQPVMVKPSEA
Query: EKYLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTE
EK + + A +L V N+HFN+T+
Subjt: EKYLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTE
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| Q14498 RNA-binding protein 39 | 4.1e-10 | 36.42 | Show/hide |
Query: MKEKKDMVEPEVDSERDQRTVFAYQRPLKARCLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQLLLG
++E D + PE ERD RTVF Q + R +D+E + VRDVR+I DRNSRRSKG+ GQ +LG
Subjt: MKEKKDMVEPEVDSERDQRTVFAYQRPLKARCLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQLLLG
Query: QPVMVKPSEAEK--YLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHL
P++V+ S+AEK +N SAGP +LYV +LHFN+TE L
Subjt: QPVMVKPSEAEK--YLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHL
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| Q5RC80 RNA-binding protein 39 | 4.1e-10 | 36.42 | Show/hide |
Query: MKEKKDMVEPEVDSERDQRTVFAYQRPLKARCLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQLLLG
++E D + PE ERD RTVF Q + R +D+E + VRDVR+I DRNSRRSKG+ GQ +LG
Subjt: MKEKKDMVEPEVDSERDQRTVFAYQRPLKARCLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQLLLG
Query: QPVMVKPSEAEK--YLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHL
P++V+ S+AEK +N SAGP +LYV +LHFN+TE L
Subjt: QPVMVKPSEAEK--YLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHL
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| Q86U06 Probable RNA-binding protein 23 | 7.0e-10 | 35.76 | Show/hide |
Query: MKEKKDMVEPEVDSERDQRTVFAYQRPLKARCLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQLLLG
++E D + PE ERD RTVF Q + R +D+E + VRDVR+I DRNSRRSKG+ GQ LLG
Subjt: MKEKKDMVEPEVDSERDQRTVFAYQRPLKARCLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQLLLG
Query: QPVMVKPSEAEK--YLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHL
P++V+ S+AEK +N + GP +LYV +LHFN+TE L
Subjt: QPVMVKPSEAEK--YLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHL
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| Q8VH51 RNA-binding protein 39 | 4.1e-10 | 36.42 | Show/hide |
Query: MKEKKDMVEPEVDSERDQRTVFAYQRPLKARCLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQLLLG
++E D + PE ERD RTVF Q + R +D+E + VRDVR+I DRNSRRSKG+ GQ +LG
Subjt: MKEKKDMVEPEVDSERDQRTVFAYQRPLKARCLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQLLLG
Query: QPVMVKPSEAEK--YLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHL
P++V+ S+AEK +N SAGP +LYV +LHFN+TE L
Subjt: QPVMVKPSEAEK--YLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHL
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G16940.1 Splicing factor, CC1-like | 6.1e-25 | 47.71 | Show/hide |
Query: EKKDMVEPEVDSERDQRTVFAYQRPLKARCLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQLLLGQP
+K+D VEPE D ERDQRTVFAYQ L+A + +D+ R VRDVR+IMDR SRRS+G+ GQ LLGQP
Subjt: EKKDMVEPEVDSERDQRTVFAYQRPLKARCLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQLLLGQP
Query: VMVKPSEAEKYLVQSNTSGASSA---GPYGAVDRKLYVRNLHFNMTETHLIEI
VMVKPSEAEK LVQS T+ A + GPY R+LYV NLH NM+E L ++
Subjt: VMVKPSEAEKYLVQSNTSGASSA---GPYGAVDRKLYVRNLHFNMTETHLIEI
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| AT2G16940.2 Splicing factor, CC1-like | 6.1e-25 | 47.71 | Show/hide |
Query: EKKDMVEPEVDSERDQRTVFAYQRPLKARCLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQLLLGQP
+K+D VEPE D ERDQRTVFAYQ L+A + +D+ R VRDVR+IMDR SRRS+G+ GQ LLGQP
Subjt: EKKDMVEPEVDSERDQRTVFAYQRPLKARCLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQLLLGQP
Query: VMVKPSEAEKYLVQSNTSGASSA---GPYGAVDRKLYVRNLHFNMTETHLIEI
VMVKPSEAEK LVQS T+ A + GPY R+LYV NLH NM+E L ++
Subjt: VMVKPSEAEKYLVQSNTSGASSA---GPYGAVDRKLYVRNLHFNMTETHLIEI
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| AT2G16940.3 Splicing factor, CC1-like | 1.6e-25 | 47.44 | Show/hide |
Query: EKKDMVEPEVDSERDQRTVFAYQRPLKARCLRILFKSGKDIEIDLLRIAVIVPLP---SVRDVRLIMDRNSRRSKGV------------------GQLLL
+K+D VEPE D ERDQRTVFAYQ L+A + +D+ R + P VRDVR+IMDR SRRS+G+ GQ LL
Subjt: EKKDMVEPEVDSERDQRTVFAYQRPLKARCLRILFKSGKDIEIDLLRIAVIVPLP---SVRDVRLIMDRNSRRSKGV------------------GQLLL
Query: GQPVMVKPSEAEKYLVQSNTSGASSA---GPYGAVDRKLYVRNLHFNMTETHLIEI
GQPVMVKPSEAEK LVQS T+ A + GPY R+LYV NLH NM+E L ++
Subjt: GQPVMVKPSEAEKYLVQSNTSGASSA---GPYGAVDRKLYVRNLHFNMTETHLIEI
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| AT5G09880.1 Splicing factor, CC1-like | 2.6e-28 | 52.6 | Show/hide |
Query: KEKKDMVEPEVDSERDQRTVFAYQRPLKAR---CLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQLL
++KKD EPE D ERDQRTVFAYQ PLKA K+GK VRDVRLIMDRNSRRSKGV GQL
Subjt: KEKKDMVEPEVDSERDQRTVFAYQRPLKAR---CLRILFKSGKDIEIDLLRIAVIVPLPSVRDVRLIMDRNSRRSKGV------------------GQLL
Query: LGQPVMVKPSEAEKYLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHLIEI
LGQPVMVKPSEAEK L QSN++ GP DRKLYV NLHFNM+E L +I
Subjt: LGQPVMVKPSEAEKYLVQSNTSGASSAGPYGAVDRKLYVRNLHFNMTETHLIEI
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