; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035311 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035311
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationchr3:18585766..18589143
RNA-Seq ExpressionLag0035311
SyntenyLag0035311
Gene Ontology termsGO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040447.1 transposase [Cucumis melo var. makuwa]1.3e-1363.89Show/hide
Query:  MSIDILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWLDSKSISLDHDDLIAIVEASMFEDG
        M+ DIL IP+STVASESAFSTGGRVV+ SRCS  PKTVE LIC +NWL+S  I L       + EAS FE+G
Subjt:  MSIDILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWLDSKSISLDHDDLIAIVEASMFEDG

KAA0048472.1 transposase [Cucumis melo var. makuwa]1.3e-1352.08Show/hide
Query:  MSIDILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWLDSKSISLDHDDLIAIVEASMFEDGICPSLHVTDNSEFVDEQEKRDLQD
        M+ DIL IP+STVASESAFSTGGRV++ SRCS  PKTVE LIC +NWL+S  I L       + EAS FE+G    +         +E+E  DL D
Subjt:  MSIDILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWLDSKSISLDHDDLIAIVEASMFEDGICPSLHVTDNSEFVDEQEKRDLQD

KAA0056625.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]7.9e-1454.17Show/hide
Query:  MSIDILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWLDSKSISLDHDDLIAIVEASMFEDGICPSLHVTDNSEFVDEQEKRDLQD
        M+ DIL IPISTVASESAFSTGGRVV+ SRCS  PKTVE LIC +NWL+S  I L       + EAS FE+G    +         +E+E  DL D
Subjt:  MSIDILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWLDSKSISLDHDDLIAIVEASMFEDGICPSLHVTDNSEFVDEQEKRDLQD

TYK28262.1 transposase [Cucumis melo var. makuwa]1.0e-1353.12Show/hide
Query:  MSIDILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWLDSKSISLDHDDLIAIVEASMFEDGICPSLHVTDNSEFVDEQEKRDLQD
        M+ DIL IP+STVASESAFSTGGRVV+ SRCS  PKTVE LIC +NWL+S  I L       + EAS FE+G    +         +E+E +DL D
Subjt:  MSIDILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWLDSKSISLDHDDLIAIVEASMFEDGICPSLHVTDNSEFVDEQEKRDLQD

TYK28895.1 putative transposase [Cucumis melo var. makuwa]1.3e-1363.89Show/hide
Query:  MSIDILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWLDSKSISLDHDDLIAIVEASMFEDG
        M+ DIL IP+STVASESAFSTGGRVV+ SRCS  PKTVE LIC +NWL+S  I L       + EAS FE+G
Subjt:  MSIDILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWLDSKSISLDHDDLIAIVEASMFEDG

TrEMBL top hitse value%identityAlignment
A0A5A7USY1 Zinc finger BED domain-containing protein RICESLEEPER 2-like3.8e-1454.17Show/hide
Query:  MSIDILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWLDSKSISLDHDDLIAIVEASMFEDGICPSLHVTDNSEFVDEQEKRDLQD
        M+ DIL IPISTVASESAFSTGGRVV+ SRCS  PKTVE LIC +NWL+S  I L       + EAS FE+G    +         +E+E  DL D
Subjt:  MSIDILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWLDSKSISLDHDDLIAIVEASMFEDGICPSLHVTDNSEFVDEQEKRDLQD

A0A5D3CXI1 Zinc finger BED domain-containing protein RICESLEEPER 3-like6.5e-1453.12Show/hide
Query:  MSIDILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWLDSKSISLDHDDLIAIVEASMFEDGICPSLHVTDNSEFVDEQEKRDLQD
        M+ DIL IP+STVASESAFSTGGRVV+ SRCS  PKTVE LIC +NWL+S  I L       + EAS FE+G    +         +E+E  DL D
Subjt:  MSIDILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWLDSKSISLDHDDLIAIVEASMFEDGICPSLHVTDNSEFVDEQEKRDLQD

A0A5D3DAN8 Zinc finger BED domain-containing protein RICESLEEPER 3-like6.5e-1453.12Show/hide
Query:  MSIDILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWLDSKSISLDHDDLIAIVEASMFEDGICPSLHVTDNSEFVDEQEKRDLQD
        M+ DIL IP+STVASESAFSTGGRVV+ SRCS  PKTVE LIC +NWL+S  I L       + EAS FE+G    +         +E+E  DL D
Subjt:  MSIDILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWLDSKSISLDHDDLIAIVEASMFEDGICPSLHVTDNSEFVDEQEKRDLQD

A0A5D3DXL6 Transposase5.0e-1453.12Show/hide
Query:  MSIDILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWLDSKSISLDHDDLIAIVEASMFEDGICPSLHVTDNSEFVDEQEKRDLQD
        M+ DIL IP+STVASESAFSTGGRVV+ SRCS  PKTVE LIC +NWL+S  I L       + EAS FE+G    +         +E+E +DL D
Subjt:  MSIDILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWLDSKSISLDHDDLIAIVEASMFEDGICPSLHVTDNSEFVDEQEKRDLQD

A0A5D3DXX1 Transposase6.5e-1452.08Show/hide
Query:  MSIDILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWLDSKSISLDHDDLIAIVEASMFEDGICPSLHVTDNSEFVDEQEKRDLQD
        M+ DIL IP+STVASESAFSTGGRV++ SRCS  PKTVE LIC +NWL+S  I L       + EAS FE+G    +         +E+E  DL D
Subjt:  MSIDILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWLDSKSISLDHDDLIAIVEASMFEDGICPSLHVTDNSEFVDEQEKRDLQD

SwissProt top hitse value%identityAlignment
P03010 Putative AC9 transposase3.3e-0760Show/hide
Query:  DILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWL
        D+L I +STVASESAFS GGRVV+P R     + VE LIC K+W+
Subjt:  DILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWL

P08770 Putative AC transposase3.3e-0760Show/hide
Query:  DILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWL
        D+L I +STVASESAFS GGRVV+P R     + VE LIC K+W+
Subjt:  DILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWL

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 21.0e-0350.98Show/hide
Query:  MSIDILTIPISTVAS-ESAFS--TGGRVVNPSRCSFTPKTVETLICAKNWL
        M+ DIL IP+S V+S  S FS  TG R+++  R S  P+ VE L+CAK+WL
Subjt:  MSIDILTIPISTVAS-ESAFS--TGGRVVNPSRCSFTPKTVETLICAKNWL

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 35.9e-0446.15Show/hide
Query:  MSIDILTIPISTVASE----SAFSTGGRVVNPSRCSFTPKTVETLICAKNWL
        M+ D+L IP+S V+S     SA +TG ++++  R S  P+TVE L CAK+WL
Subjt:  MSIDILTIPISTVASE----SAFSTGGRVVNPSRCSFTPKTVETLICAKNWL

Arabidopsis top hitse value%identityAlignment
AT3G42170.1 BED zinc finger ;hAT family dimerisation domain1.2e-0443.75Show/hide
Query:  MSIDILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWL
        M+ DIL+IP+S  A +  F    R ++  + S  P+TVE LICA+ WL
Subjt:  MSIDILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATAGATATATTGACAATTCCAATATCTACCGTAGCATCTGAGTCAGCTTTTAGTACTGGAGGACGTGTAGTCAACCCATCCCGTTGTTCTTTTACTCCAAAGAC
GGTGGAGACTCTTATATGCGCTAAAAATTGGCTAGATTCTAAATCAATATCATTAGATCATGATGATTTGATAGCCATAGTAGAAGCTTCAATGTTTGAAGATGGAATTT
GTCCCTCGCTCCACGTGACAGACAATAGTGAATTTGTAGATGAGCAGGAGAAACGTGACCTGCAAGACAAGCGAGCGCTGCACACCGGTGTGGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTATAGATATATTGACAATTCCAATATCTACCGTAGCATCTGAGTCAGCTTTTAGTACTGGAGGACGTGTAGTCAACCCATCCCGTTGTTCTTTTACTCCAAAGAC
GGTGGAGACTCTTATATGCGCTAAAAATTGGCTAGATTCTAAATCAATATCATTAGATCATGATGATTTGATAGCCATAGTAGAAGCTTCAATGTTTGAAGATGGAATTT
GTCCCTCGCTCCACGTGACAGACAATAGTGAATTTGTAGATGAGCAGGAGAAACGTGACCTGCAAGACAAGCGAGCGCTGCACACCGGTGTGGTGTAG
Protein sequenceShow/hide protein sequence
MSIDILTIPISTVASESAFSTGGRVVNPSRCSFTPKTVETLICAKNWLDSKSISLDHDDLIAIVEASMFEDGICPSLHVTDNSEFVDEQEKRDLQDKRALHTGVV