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Lag0035325 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035325
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationchr3:18927968..18928843
RNA-Seq ExpressionLag0035325
SyntenyLag0035325
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048500.1 protein MNN4-like [Cucumis melo var. makuwa]9.9e-1342.5Show/hide
Query:  MVSFSSVDINRVY--RTKAPLHPRGNDAIRNPSANHMKNALKLVANKGVQWKESQTKVKTLVPSDQKPESAAWLHFIKNRLMPTTHDSTISVERIMLLYC
        MV+F    +N +Y  R     +P      + PS   M+NAL+ VA  G++W  +  K   L P + K  ++ WL FIK  LMPT HD+TIS+ERIMLLYC
Subjt:  MVSFSSVDINRVY--RTKAPLHPRGNDAIRNPSANHMKNALKLVANKGVQWKESQTKVKTLVPSDQKPESAAWLHFIKNRLMPTTHDSTISVERIMLLYC

Query:  IMKGFEINIGSIIKEEILAF
        IM+   +N+  II E I A+
Subjt:  IMKGFEINIGSIIKEEILAF

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]2.4e-1130.62Show/hide
Query:  VSFSSVDINRVYRTKAPL--HPRGNDAIRNPSANHMKNALKLVANKGVQWKESQTKVKTLVPSDQKPESAAWLHFIKNRLMPTTHDSTISVERIMLLYCI
        V  S+  IN +Y    P+  H    +AI  P    +   L+ VA  G +W  S     T + S   P +  W HF+K+RL+PTTH  T+S ER++LLY +
Subjt:  VSFSSVDINRVYRTKAPL--HPRGNDAIRNPSANHMKNALKLVANKGVQWKESQTKVKTLVPSDQKPESAAWLHFIKNRLMPTTHDSTISVERIMLLYCI

Query:  MKGFEINIGSIIKEEILAFPGKDEKRHFFKPTIDLSLIGKLQKN-------NIQRKDKASTSQATPPSGLNTASPSQHT---SFSGP-SPSSEALAIAYQ
        + G  IN+G II  EI A+  +     FF      SLI ++  N       N ++        A   + +    P++H+   S S P + SS + +   Q
Subjt:  MKGFEINIGSIIKEEILAFPGKDEKRHFFKPTIDLSLIGKLQKN-------NIQRKDKASTSQATPPSGLNTASPSQHT---SFSGP-SPSSEALAIAYQ

Query:  QLDQLRDNL
        QL  L   +
Subjt:  QLDQLRDNL

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]6.4e-1229.31Show/hide
Query:  VSFSSVDINRVYRTKAPLHPRGNDAIRNPSANHMKNALKLVANKGVQWKESQTKVKTLVPSDQKPESAAWLHFIKNRLMPTTHDSTISVERIMLLYCIMK
        VS+S   IN V+    P+    ++ I N +   +   L+ VA  G +W  S     T + S   P +  W HF+K+RL+PTTH   +S +R++LL+ ++ 
Subjt:  VSFSSVDINRVYRTKAPLHPRGNDAIRNPSANHMKNALKLVANKGVQWKESQTKVKTLVPSDQKPESAAWLHFIKNRLMPTTHDSTISVERIMLLYCIMK

Query:  GFEINIGSIIKEEILAFPGKDEKRHFFKPTIDLSLIGKLQKN-----NIQRKDKASTSQATPPSGLNTASPSQHT---SFSGP--SPSSEALAIAYQQLD
        G  IN+G +I  EI A   +     FF      SLI +L +N     N ++        A   + +    P++ T   S S P  + SS       QQL 
Subjt:  GFEINIGSIIKEEILAFPGKDEKRHFFKPTIDLSLIGKLQKN-----NIQRKDKASTSQATPPSGLNTASPSQHT---SFSGP--SPSSEALAIAYQQLD

Query:  QLRDNL----------RTYWAYAKERDEVIRE
         L   L          + +WAY+KERD  +++
Subjt:  QLRDNL----------RTYWAYAKERDEVIRE

XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]3.1e-1436.21Show/hide
Query:  VSFSSVDINRVYRTKAPLHPRGNDAIRNPSANHMKNALKLVANKGVQWKESQTKVKTLVPSDQKPESAAWLHFIKNRLMPTTHDSTISVERIMLLYCIMK
        VSFS+ DIN +Y+ K   +  GN  I +P+   M++AL+++   G++W  S   V TL       E   W++ +K RL+ TTHD T+S +R+M  YCI++
Subjt:  VSFSSVDINRVYRTKAPLHPRGNDAIRNPSANHMKNALKLVANKGVQWKESQTKVKTLVPSDQKPESAAWLHFIKNRLMPTTHDSTISVERIMLLYCIMK

Query:  GFEINIGSIIKEEILA
           I++G +I  ++ A
Subjt:  GFEINIGSIIKEEILA

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]5.3e-1437.84Show/hide
Query:  MVSFSSVDINRVYRTKAPLHPRGNDAIRNPSANHMKNALKLVANKGVQWKESQTKVKTLVPSDQKPESAAWLHFIKNRLMPTTHDSTISVERIMLLYCIM
        +V FS+ DIN +Y+ K      GN  I +P    M++AL+ +   G QW  S   +KTL  S   PE+  W++ +K R++PT+HD T+S +R+M  YCI 
Subjt:  MVSFSSVDINRVYRTKAPLHPRGNDAIRNPSANHMKNALKLVANKGVQWKESQTKVKTLVPSDQKPESAAWLHFIKNRLMPTTHDSTISVERIMLLYCIM

Query:  KGFEINIGSII
         G  I++  +I
Subjt:  KGFEINIGSII

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)3.4e-1127.94Show/hide
Query:  VSFSSVDINRVYRTKAPLHPRGNDAIRNPSANHMKNALKLVANKGVQWKESQTKVKTLVPSDQKPESAAWLHFIKNRLMPTTHDSTISVERIMLLYCIMK
        VS+S   IN V+    P+    ++ I+N +   +   L+ VA  G +W  S     T + S   P +  W HF+K+RL+PTTH  T+S +R++LL+ ++ 
Subjt:  VSFSSVDINRVYRTKAPLHPRGNDAIRNPSANHMKNALKLVANKGVQWKESQTKVKTLVPSDQKPESAAWLHFIKNRLMPTTHDSTISVERIMLLYCIMK

Query:  GFEINIGSIIKEEILAFPGKDEKRHFFKPTIDLSLIGKLQKN-------NIQRKDKASTSQATPPSGLNTASPSQHTSFSGPSPSSEALAIA-------Y
        G  IN+G +I  EI A   +     FF      SLI +L +N       N ++        A   + +    P++ T    PS S  A A +        
Subjt:  GFEINIGSIIKEEILAFPGKDEKRHFFKPTIDLSLIGKLQKN-------NIQRKDKASTSQATPPSGLNTASPSQHTSFSGPSPSSEALAIA-------Y

Query:  QQLDQLRDNL---------------------RTYWAYAKERDEVIRE
        QQL  L   L                     + +WAY+KERD  +++
Subjt:  QQLDQLRDNL---------------------RTYWAYAKERDEVIRE

A0A2P5CPE8 Uncharacterized protein1.2e-1130.62Show/hide
Query:  VSFSSVDINRVYRTKAPL--HPRGNDAIRNPSANHMKNALKLVANKGVQWKESQTKVKTLVPSDQKPESAAWLHFIKNRLMPTTHDSTISVERIMLLYCI
        V  S+  IN +Y    P+  H    +AI  P    +   L+ VA  G +W  S     T + S   P +  W HF+K+RL+PTTH  T+S ER++LLY +
Subjt:  VSFSSVDINRVYRTKAPL--HPRGNDAIRNPSANHMKNALKLVANKGVQWKESQTKVKTLVPSDQKPESAAWLHFIKNRLMPTTHDSTISVERIMLLYCI

Query:  MKGFEINIGSIIKEEILAFPGKDEKRHFFKPTIDLSLIGKLQKN-------NIQRKDKASTSQATPPSGLNTASPSQHT---SFSGP-SPSSEALAIAYQ
        + G  IN+G II  EI A+  +     FF      SLI ++  N       N ++        A   + +    P++H+   S S P + SS + +   Q
Subjt:  MKGFEINIGSIIKEEILAFPGKDEKRHFFKPTIDLSLIGKLQKN-------NIQRKDKASTSQATPPSGLNTASPSQHT---SFSGP-SPSSEALAIAYQ

Query:  QLDQLRDNL
        QL  L   +
Subjt:  QLDQLRDNL

A0A2P5DXM3 Uncharacterized protein3.1e-1229.31Show/hide
Query:  VSFSSVDINRVYRTKAPLHPRGNDAIRNPSANHMKNALKLVANKGVQWKESQTKVKTLVPSDQKPESAAWLHFIKNRLMPTTHDSTISVERIMLLYCIMK
        VS+S   IN V+    P+    ++ I N +   +   L+ VA  G +W  S     T + S   P +  W HF+K+RL+PTTH   +S +R++LL+ ++ 
Subjt:  VSFSSVDINRVYRTKAPLHPRGNDAIRNPSANHMKNALKLVANKGVQWKESQTKVKTLVPSDQKPESAAWLHFIKNRLMPTTHDSTISVERIMLLYCIMK

Query:  GFEINIGSIIKEEILAFPGKDEKRHFFKPTIDLSLIGKLQKN-----NIQRKDKASTSQATPPSGLNTASPSQHT---SFSGP--SPSSEALAIAYQQLD
        G  IN+G +I  EI A   +     FF      SLI +L +N     N ++        A   + +    P++ T   S S P  + SS       QQL 
Subjt:  GFEINIGSIIKEEILAFPGKDEKRHFFKPTIDLSLIGKLQKN-----NIQRKDKASTSQATPPSGLNTASPSQHT---SFSGP--SPSSEALAIAYQQLD

Query:  QLRDNL----------RTYWAYAKERDEVIRE
         L   L          + +WAY+KERD  +++
Subjt:  QLRDNL----------RTYWAYAKERDEVIRE

A0A5A7TZE0 Protein MNN4-like4.8e-1342.5Show/hide
Query:  MVSFSSVDINRVY--RTKAPLHPRGNDAIRNPSANHMKNALKLVANKGVQWKESQTKVKTLVPSDQKPESAAWLHFIKNRLMPTTHDSTISVERIMLLYC
        MV+F    +N +Y  R     +P      + PS   M+NAL+ VA  G++W  +  K   L P + K  ++ WL FIK  LMPT HD+TIS+ERIMLLYC
Subjt:  MVSFSSVDINRVY--RTKAPLHPRGNDAIRNPSANHMKNALKLVANKGVQWKESQTKVKTLVPSDQKPESAAWLHFIKNRLMPTTHDSTISVERIMLLYC

Query:  IMKGFEINIGSIIKEEILAF
        IM+   +N+  II E I A+
Subjt:  IMKGFEINIGSIIKEEILAF

A0A5A7U0U4 Uncharacterized protein7.7e-1136.21Show/hide
Query:  VSFSSVDINRVYRTKAPLHPRGNDAIRNPSANHMKNALKLVANKGVQWKESQTKVKTLVPSDQKPESAAWLHFIKNRLMPTTHDSTISVERIMLLYCIMK
        ++F    IN +Y  K   +  G+   +NP   +++ AL+     G +W +  T +  L P +   E++ WL FIK  +MPT HD+ IS+ERIMLLY I+ 
Subjt:  VSFSSVDINRVYRTKAPLHPRGNDAIRNPSANHMKNALKLVANKGVQWKESQTKVKTLVPSDQKPESAAWLHFIKNRLMPTTHDSTISVERIMLLYCIMK

Query:  GFEINIGSIIKEEILA
           +N+G II E + A
Subjt:  GFEINIGSIIKEEILA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAGCTTCTCTTCAGTGGACATCAACAGGGTGTACAGGACTAAAGCACCCTTACATCCAAGAGGGAATGATGCCATCAGGAACCCCTCGGCCAATCATATGAAAAA
TGCACTGAAATTAGTGGCCAACAAAGGAGTTCAATGGAAAGAATCCCAGACAAAGGTGAAGACACTAGTGCCAAGCGACCAAAAGCCTGAATCTGCAGCATGGCTTCACT
TTATCAAGAACCGATTGATGCCAACCACCCATGATAGCACCATCTCAGTGGAGAGAATTATGCTCCTCTACTGTATTATGAAGGGGTTCGAGATTAACATTGGGAGCATT
ATCAAGGAAGAGATTCTTGCCTTTCCTGGCAAGGATGAGAAGCGTCACTTCTTCAAGCCTACCATTGACCTGTCCTTGATCGGGAAGCTTCAAAAGAACAACATCCAAAG
GAAAGACAAAGCCTCCACATCTCAAGCCACTCCACCGTCAGGGCTAAACACGGCTTCTCCATCTCAGCACACTTCTTTTTCAGGGCCCTCACCATCGTCTGAAGCCCTAG
CAATTGCCTATCAACAGCTAGATCAACTCAGGGATAACCTGAGGACTTATTGGGCATATGCCAAGGAGAGAGATGAAGTCATTAGAGAGTTCTACCTCTCTATCGCCCGA
GTATTGCTCCTATCTTTCTTGATTTCCCTAAATCGCCGCTGCCTCAAGGAGACAAGGATTCTGATGAAGAAGATTATGAAAATGATGAAGATGAAGATGAAGAAAGAGAG
AGTTCCTCATACGAGGACTAAGGGAGTTTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAGCTTCTCTTCAGTGGACATCAACAGGGTGTACAGGACTAAAGCACCCTTACATCCAAGAGGGAATGATGCCATCAGGAACCCCTCGGCCAATCATATGAAAAA
TGCACTGAAATTAGTGGCCAACAAAGGAGTTCAATGGAAAGAATCCCAGACAAAGGTGAAGACACTAGTGCCAAGCGACCAAAAGCCTGAATCTGCAGCATGGCTTCACT
TTATCAAGAACCGATTGATGCCAACCACCCATGATAGCACCATCTCAGTGGAGAGAATTATGCTCCTCTACTGTATTATGAAGGGGTTCGAGATTAACATTGGGAGCATT
ATCAAGGAAGAGATTCTTGCCTTTCCTGGCAAGGATGAGAAGCGTCACTTCTTCAAGCCTACCATTGACCTGTCCTTGATCGGGAAGCTTCAAAAGAACAACATCCAAAG
GAAAGACAAAGCCTCCACATCTCAAGCCACTCCACCGTCAGGGCTAAACACGGCTTCTCCATCTCAGCACACTTCTTTTTCAGGGCCCTCACCATCGTCTGAAGCCCTAG
CAATTGCCTATCAACAGCTAGATCAACTCAGGGATAACCTGAGGACTTATTGGGCATATGCCAAGGAGAGAGATGAAGTCATTAGAGAGTTCTACCTCTCTATCGCCCGA
GTATTGCTCCTATCTTTCTTGATTTCCCTAAATCGCCGCTGCCTCAAGGAGACAAGGATTCTGATGAAGAAGATTATGAAAATGATGAAGATGAAGATGAAGAAAGAGAG
AGTTCCTCATACGAGGACTAAGGGAGTTTTATGA
Protein sequenceShow/hide protein sequence
MVSFSSVDINRVYRTKAPLHPRGNDAIRNPSANHMKNALKLVANKGVQWKESQTKVKTLVPSDQKPESAAWLHFIKNRLMPTTHDSTISVERIMLLYCIMKGFEINIGSI
IKEEILAFPGKDEKRHFFKPTIDLSLIGKLQKNNIQRKDKASTSQATPPSGLNTASPSQHTSFSGPSPSSEALAIAYQQLDQLRDNLRTYWAYAKERDEVIREFYLSIAR
VLLLSFLISLNRRCLKETRILMKKIMKMMKMKMKKERVPHTRTKGVL