; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035345 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035345
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionpeptidyl-prolyl cis-trans isomerase CYP40
Genome locationchr3:19865386..19867350
RNA-Seq ExpressionLag0035345
SyntenyLag0035345
Gene Ontology termsGO:0000413 - protein peptidyl-prolyl isomerization (biological process)
GO:0006457 - protein folding (biological process)
GO:0010050 - vegetative phase change (biological process)
GO:0010582 - floral meristem determinacy (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR019734 - Tetratricopeptide repeat


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2703564.1 hypothetical protein I3760_06G144300 [Carya illinoinensis]7.1e-1369.84Show/hide
Query:  TACKLKLVDKKGALLDIEFAMSEGYNDVKAMFCLVGLVYMALNVIDAAIESFKKELDLEPNDG
        +ACKLK  D KGALLD EFAM +G N+VKA+F   G  YMALN +DAA+ESFKK LDLEPNDG
Subjt:  TACKLKLVDKKGALLDIEFAMSEGYNDVKAMFCLVGLVYMALNVIDAAIESFKKELDLEPNDG

KAG6709635.1 hypothetical protein I3842_06G142700 [Carya illinoinensis]7.1e-1369.84Show/hide
Query:  TACKLKLVDKKGALLDIEFAMSEGYNDVKAMFCLVGLVYMALNVIDAAIESFKKELDLEPNDG
        +ACKLK  D KGALLD EFAM +G N+VKA+F   G  YMALN +DAA+ESFKK LDLEPNDG
Subjt:  TACKLKLVDKKGALLDIEFAMSEGYNDVKAMFCLVGLVYMALNVIDAAIESFKKELDLEPNDG

XP_022148683.1 peptidyl-prolyl cis-trans isomerase CYP40 [Momordica charantia]1.9e-1375.81Show/hide
Query:  TACKLKLVDKKGALLDIEFAMSEGYNDVKAMFCLVGLVYMALNVIDAAIESFKKELDLEPND
        +ACKLKL D KGALLD EFAM EG N+VKAMF   G  YMALN IDAA+ESFKK LDLEPND
Subjt:  TACKLKLVDKKGALLDIEFAMSEGYNDVKAMFCLVGLVYMALNVIDAAIESFKKELDLEPND

XP_042493106.1 peptidyl-prolyl cis-trans isomerase CYP40-like [Macadamia integrifolia]4.2e-1369.84Show/hide
Query:  TACKLKLVDKKGALLDIEFAMSEGYNDVKAMFCLVGLVYMALNVIDAAIESFKKELDLEPNDG
        +ACKLKL D KGALLD +FAM +G N+VKA+F   G  YMALN +DAA+ESFKK LDLEPNDG
Subjt:  TACKLKLVDKKGALLDIEFAMSEGYNDVKAMFCLVGLVYMALNVIDAAIESFKKELDLEPNDG

XP_042983940.1 peptidyl-prolyl cis-trans isomerase CYP40-like [Carya illinoinensis]7.1e-1369.84Show/hide
Query:  TACKLKLVDKKGALLDIEFAMSEGYNDVKAMFCLVGLVYMALNVIDAAIESFKKELDLEPNDG
        +ACKLK  D KGALLD EFAM +G N+VKA+F   G  YMALN +DAA+ESFKK LDLEPNDG
Subjt:  TACKLKLVDKKGALLDIEFAMSEGYNDVKAMFCLVGLVYMALNVIDAAIESFKKELDLEPNDG

TrEMBL top hitse value%identityAlignment
A0A1R3HVD2 Tetratricopeptide TPR-15.9e-1369.84Show/hide
Query:  TACKLKLVDKKGALLDIEFAMSEGYNDVKAMFCLVGLVYMALNVIDAAIESFKKELDLEPNDG
        +ACKLKL D KGALLD EFAM +G N+VKA+F   G  YMALN +DAA+ESFKK L LEPNDG
Subjt:  TACKLKLVDKKGALLDIEFAMSEGYNDVKAMFCLVGLVYMALNVIDAAIESFKKELDLEPNDG

A0A1R3K3H3 Tetratricopeptide TPR-15.9e-1369.84Show/hide
Query:  TACKLKLVDKKGALLDIEFAMSEGYNDVKAMFCLVGLVYMALNVIDAAIESFKKELDLEPNDG
        +ACKLKL D KGALLD EFAM +G N+VKA+F   G  YMALN +DAA+ESFKK L LEPNDG
Subjt:  TACKLKLVDKKGALLDIEFAMSEGYNDVKAMFCLVGLVYMALNVIDAAIESFKKELDLEPNDG

A0A2P5BK61 Cyclophilin-type peptidyl-prolyl cis-trans isomerase7.7e-1370.97Show/hide
Query:  TACKLKLVDKKGALLDIEFAMSEGYNDVKAMFCLVGLVYMALNVIDAAIESFKKELDLEPND
        +ACKLKL D KGALLD +FAM +G N+VKA+F   G  YMALN IDAA+ESFKK LDLEPND
Subjt:  TACKLKLVDKKGALLDIEFAMSEGYNDVKAMFCLVGLVYMALNVIDAAIESFKKELDLEPND

A0A6J1D4S1 peptidyl-prolyl cis-trans isomerase CYP409.1e-1475.81Show/hide
Query:  TACKLKLVDKKGALLDIEFAMSEGYNDVKAMFCLVGLVYMALNVIDAAIESFKKELDLEPND
        +ACKLKL D KGALLD EFAM EG N+VKAMF   G  YMALN IDAA+ESFKK LDLEPND
Subjt:  TACKLKLVDKKGALLDIEFAMSEGYNDVKAMFCLVGLVYMALNVIDAAIESFKKELDLEPND

A0A6P5YKP3 peptidyl-prolyl cis-trans isomerase CYP40-like7.7e-1353.33Show/hide
Query:  VMHDPNGISRCSGFVAFSTPEESF--RTACKLKLVDKKGALLDIEFAMSEGYNDVKAMFCLVGLVYMALNVIDAAIESFKKELDLEPNDG
        V  +  GI          T  + F   +ACKLKL D KGALLD +FA+ +G ++VKA F   G  YMALN IDAA+ESFKK LDLEPNDG
Subjt:  VMHDPNGISRCSGFVAFSTPEESF--RTACKLKLVDKKGALLDIEFAMSEGYNDVKAMFCLVGLVYMALNVIDAAIESFKKELDLEPNDG

SwissProt top hitse value%identityAlignment
P42731 Polyadenylate-binding protein 21.7e-0436.78Show/hide
Query:  MYSHRDPSICKTGAGNIFIKNLAKQLATGLYMIQFLHLVVFCLAKWLWIPLASQKIMVMHDPNGISRCSGFVAFSTPEESFRTACKL
        MYSHRDPS+ ++GAGNIFIKNL + +       + LH             + S K+ V  D +G S+  GFV ++  E + +   KL
Subjt:  MYSHRDPSICKTGAGNIFIKNLAKQLATGLYMIQFLHLVVFCLAKWLWIPLASQKIMVMHDPNGISRCSGFVAFSTPEESFRTACKL

Q6BI95 Polyadenylate-binding protein, cytoplasmic and nuclear4.8e-0438.46Show/hide
Query:  MYSHRDPSICKTGAGNIFIKNLAKQLATGLYMIQFLHLVVFCLAKWLWIPLASQKIMVMHDPNGISRCSGFVAFSTPE
        M+S RDPS+ + G GNIFIKNL   +       + LH       K L   +A+       D  GIS+C GFV + T E
Subjt:  MYSHRDPSICKTGAGNIFIKNLAKQLATGLYMIQFLHLVVFCLAKWLWIPLASQKIMVMHDPNGISRCSGFVAFSTPE

Q9C566 Peptidyl-prolyl cis-trans isomerase CYP403.1e-1162.3Show/hide
Query:  ACKLKLVDKKGALLDIEFAMSEGYNDVKAMFCLVGLVYMALNVIDAAIESFKKELDLEPND
        ACKLK  D KGALLD EFAM +  N+VKA+F   G  YMALN +DAA ES +K L  EPND
Subjt:  ACKLKLVDKKGALLDIEFAMSEGYNDVKAMFCLVGLVYMALNVIDAAIESFKKELDLEPND

Q9FXA2 Polyadenylate-binding protein 82.5e-0542.31Show/hide
Query:  MYSHRDPSICKTGAGNIFIKNLAKQLATGLYMIQFLHLVVFCLAKWLWIPLASQKIMVMHDPNGISRCSGFVAFSTPE
        MYS RDPS+ K+G GNIFIKNL K +       + LH            P+ S K+ V  DP+G S+  GFV + T E
Subjt:  MYSHRDPSICKTGAGNIFIKNLAKQLATGLYMIQFLHLVVFCLAKWLWIPLASQKIMVMHDPNGISRCSGFVAFSTPE

Arabidopsis top hitse value%identityAlignment
AT1G49760.1 poly(A) binding protein 81.8e-0642.31Show/hide
Query:  MYSHRDPSICKTGAGNIFIKNLAKQLATGLYMIQFLHLVVFCLAKWLWIPLASQKIMVMHDPNGISRCSGFVAFSTPE
        MYS RDPS+ K+G GNIFIKNL K +       + LH            P+ S K+ V  DP+G S+  GFV + T E
Subjt:  MYSHRDPSICKTGAGNIFIKNLAKQLATGLYMIQFLHLVVFCLAKWLWIPLASQKIMVMHDPNGISRCSGFVAFSTPE

AT1G49760.2 poly(A) binding protein 81.8e-0642.31Show/hide
Query:  MYSHRDPSICKTGAGNIFIKNLAKQLATGLYMIQFLHLVVFCLAKWLWIPLASQKIMVMHDPNGISRCSGFVAFSTPE
        MYS RDPS+ K+G GNIFIKNL K +       + LH            P+ S K+ V  DP+G S+  GFV + T E
Subjt:  MYSHRDPSICKTGAGNIFIKNLAKQLATGLYMIQFLHLVVFCLAKWLWIPLASQKIMVMHDPNGISRCSGFVAFSTPE

AT2G15790.1 peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase2.2e-1262.3Show/hide
Query:  ACKLKLVDKKGALLDIEFAMSEGYNDVKAMFCLVGLVYMALNVIDAAIESFKKELDLEPND
        ACKLK  D KGALLD EFAM +  N+VKA+F   G  YMALN +DAA ES +K L  EPND
Subjt:  ACKLKLVDKKGALLDIEFAMSEGYNDVKAMFCLVGLVYMALNVIDAAIESFKKELDLEPND

AT4G34110.1 poly(A) binding protein 21.2e-0536.78Show/hide
Query:  MYSHRDPSICKTGAGNIFIKNLAKQLATGLYMIQFLHLVVFCLAKWLWIPLASQKIMVMHDPNGISRCSGFVAFSTPEESFRTACKL
        MYSHRDPS+ ++GAGNIFIKNL + +       + LH             + S K+ V  D +G S+  GFV ++  E + +   KL
Subjt:  MYSHRDPSICKTGAGNIFIKNLAKQLATGLYMIQFLHLVVFCLAKWLWIPLASQKIMVMHDPNGISRCSGFVAFSTPEESFRTACKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTCTCACCGTGACCCAAGCATTTGCAAAACTGGGGCTGGAAATATATTTATCAAGAATTTAGCAAAGCAATTGGCTACAGGGCTCTACATGATACAGTTTCTGCA
TTTGGTAGTATTTTGTCTTGCAAAGTGGCTTTGGATTCCTTTGGCCAGTCAAAAGATTATGGTCATGCATGATCCCAATGGCATAAGCAGGTGTTCTGGTTTTGTTGCAT
TCTCAACTCCTGAAGAGTCATTTAGAACTGCTTGTAAACTGAAGCTAGTGGATAAAAAAGGAGCATTATTGGACATTGAATTTGCAATGAGCGAGGGGTATAATGATGTA
AAAGCCATGTTCTGCCTGGTCGGGTTGGTTTATATGGCTCTTAATGTCATTGATGCTGCAATTGAAAGCTTTAAAAAGGAATTGGATTTGGAGCCAAATGATGGGGAGTC
ATGA
mRNA sequenceShow/hide mRNA sequence
ATGTATTCTCACCGTGACCCAAGCATTTGCAAAACTGGGGCTGGAAATATATTTATCAAGAATTTAGCAAAGCAATTGGCTACAGGGCTCTACATGATACAGTTTCTGCA
TTTGGTAGTATTTTGTCTTGCAAAGTGGCTTTGGATTCCTTTGGCCAGTCAAAAGATTATGGTCATGCATGATCCCAATGGCATAAGCAGGTGTTCTGGTTTTGTTGCAT
TCTCAACTCCTGAAGAGTCATTTAGAACTGCTTGTAAACTGAAGCTAGTGGATAAAAAAGGAGCATTATTGGACATTGAATTTGCAATGAGCGAGGGGTATAATGATGTA
AAAGCCATGTTCTGCCTGGTCGGGTTGGTTTATATGGCTCTTAATGTCATTGATGCTGCAATTGAAAGCTTTAAAAAGGAATTGGATTTGGAGCCAAATGATGGGGAGTC
ATGA
Protein sequenceShow/hide protein sequence
MYSHRDPSICKTGAGNIFIKNLAKQLATGLYMIQFLHLVVFCLAKWLWIPLASQKIMVMHDPNGISRCSGFVAFSTPEESFRTACKLKLVDKKGALLDIEFAMSEGYNDV
KAMFCLVGLVYMALNVIDAAIESFKKELDLEPNDGES