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Lag0035359 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035359
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr3:20337188..20337613
RNA-Seq ExpressionLag0035359
SyntenyLag0035359
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]5.4e-1842.14Show/hide
Query:  MSVEELLKSKKTEREHKRFSSSNYDSKKDKRQWTDEGGRGRADHGRDRSDQGDYLKKFEKYTRTSVPQERILMEIRDTNLLSAPRKLKSNPDNRDKSQYC
        MS  E   SK+          SN      KR+ + +  +G     RDRS Q D  +KFEKYT T+VP E++LMEI++  LL  P ++ ++   R K +YC
Subjt:  MSVEELLKSKKTEREHKRFSSSNYDSKKDKRQWTDEGGRGRADHGRDRSDQGDYLKKFEKYTRTSVPQERILMEIRDTNLLSAPRKLKSNPDNRDKSQYC

Query:  LFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTAKAEAYQ
        LFH DHGH+T++C  LK+E+E LI  GYLKE+  + +A Q
Subjt:  LFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTAKAEAYQ

XP_022155873.1 uncharacterized protein LOC111022886 [Momordica charantia]1.1e-1553.09Show/hide
Query:  KYTRTSVPQERILMEIRDTNLLSAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTAKAEAYQ
        K T T+V  E++LMEI+D  LL  P ++K+ P  R K QY LFHRDHGH+T++C  LK+E+E LIR+GYLKE+    +A Q
Subjt:  KYTRTSVPQERILMEIRDTNLLSAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTAKAEAYQ

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.8e-2147.58Show/hide
Query:  FSSSNYDSKK--DKRQWTDEGGRGRADHGRDRSDQGDYLKKFEKYTRTSVPQERILMEIRDTNLLSAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQL
        +S    D K+   KR+ + +  +G     RDRS Q D  +KFEKYT T+VP E++LMEI+D  LL  P ++K++   R K +YCLFHRDHGH+T++C  L
Subjt:  FSSSNYDSKK--DKRQWTDEGGRGRADHGRDRSDQGDYLKKFEKYTRTSVPQERILMEIRDTNLLSAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQL

Query:  KDEIEALIRNGYLKEFTAKAEAYQ
        K+E+E LIR GYLKE+  + +A Q
Subjt:  KDEIEALIRNGYLKEFTAKAEAYQ

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]9.2e-1846.04Show/hide
Query:  MSVEELLKSKKTEREHKRFSSSNYDSKKDKRQWTDEGGRGRADHGRDR-SDQGDYLKKFEKYTRTSVPQERILMEIRDTNLLSAPRKLKSNPDNRDKSQY
        MS EE    KK E E KR           KR+ + E         +DR   Q D  +KFEKYT T+VP E++LMEI+D  LL  P  +K+ P+ R K +Y
Subjt:  MSVEELLKSKKTEREHKRFSSSNYDSKKDKRQWTDEGGRGRADHGRDR-SDQGDYLKKFEKYTRTSVPQERILMEIRDTNLLSAPRKLKSNPDNRDKSQY

Query:  CLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTAKAEA
        CLFHRDHGH+T +C  LK+E+E LIR GYLKE+    +A
Subjt:  CLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTAKAEA

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]1.1e-1845.16Show/hide
Query:  FSSSNYDSKK--DKRQWTDEGGRGRADHGRDRSDQGDYLKKFEKYTRTSVPQERILMEIRDTNLLSAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQL
        +S    D K+   KR+ + +  +G     RDRS Q D  +KFEKYT T+VP E++LMEI+D  LL  P ++K     R K +YCLFHRDH H+T++   L
Subjt:  FSSSNYDSKK--DKRQWTDEGGRGRADHGRDRSDQGDYLKKFEKYTRTSVPQERILMEIRDTNLLSAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQL

Query:  KDEIEALIRNGYLKEFTAKAEAYQ
        K+E+E LIR GYL+E+  + +A Q
Subjt:  KDEIEALIRNGYLKEFTAKAEAYQ

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128052.6e-1842.14Show/hide
Query:  MSVEELLKSKKTEREHKRFSSSNYDSKKDKRQWTDEGGRGRADHGRDRSDQGDYLKKFEKYTRTSVPQERILMEIRDTNLLSAPRKLKSNPDNRDKSQYC
        MS  E   SK+          SN      KR+ + +  +G     RDRS Q D  +KFEKYT T+VP E++LMEI++  LL  P ++ ++   R K +YC
Subjt:  MSVEELLKSKKTEREHKRFSSSNYDSKKDKRQWTDEGGRGRADHGRDRSDQGDYLKKFEKYTRTSVPQERILMEIRDTNLLSAPRKLKSNPDNRDKSQYC

Query:  LFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTAKAEAYQ
        LFH DHGH+T++C  LK+E+E LI  GYLKE+  + +A Q
Subjt:  LFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTAKAEAYQ

A0A6J1DP33 uncharacterized protein LOC1110228865.5e-1653.09Show/hide
Query:  KYTRTSVPQERILMEIRDTNLLSAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTAKAEAYQ
        K T T+V  E++LMEI+D  LL  P ++K+ P  R K QY LFHRDHGH+T++C  LK+E+E LIR+GYLKE+    +A Q
Subjt:  KYTRTSVPQERILMEIRDTNLLSAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTAKAEAYQ

A0A6J1DWY0 uncharacterized protein LOC1110252938.7e-2247.58Show/hide
Query:  FSSSNYDSKK--DKRQWTDEGGRGRADHGRDRSDQGDYLKKFEKYTRTSVPQERILMEIRDTNLLSAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQL
        +S    D K+   KR+ + +  +G     RDRS Q D  +KFEKYT T+VP E++LMEI+D  LL  P ++K++   R K +YCLFHRDHGH+T++C  L
Subjt:  FSSSNYDSKK--DKRQWTDEGGRGRADHGRDRSDQGDYLKKFEKYTRTSVPQERILMEIRDTNLLSAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQL

Query:  KDEIEALIRNGYLKEFTAKAEAYQ
        K+E+E LIR GYLKE+  + +A Q
Subjt:  KDEIEALIRNGYLKEFTAKAEAYQ

A0A6J1DYL6 uncharacterized protein LOC1110257855.3e-1945.16Show/hide
Query:  FSSSNYDSKK--DKRQWTDEGGRGRADHGRDRSDQGDYLKKFEKYTRTSVPQERILMEIRDTNLLSAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQL
        +S    D K+   KR+ + +  +G     RDRS Q D  +KFEKYT T+VP E++LMEI+D  LL  P ++K     R K +YCLFHRDH H+T++   L
Subjt:  FSSSNYDSKK--DKRQWTDEGGRGRADHGRDRSDQGDYLKKFEKYTRTSVPQERILMEIRDTNLLSAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQL

Query:  KDEIEALIRNGYLKEFTAKAEAYQ
        K+E+E LIR GYL+E+  + +A Q
Subjt:  KDEIEALIRNGYLKEFTAKAEAYQ

A0A6J1DZ52 uncharacterized protein LOC1110256124.5e-1846.04Show/hide
Query:  MSVEELLKSKKTEREHKRFSSSNYDSKKDKRQWTDEGGRGRADHGRDR-SDQGDYLKKFEKYTRTSVPQERILMEIRDTNLLSAPRKLKSNPDNRDKSQY
        MS EE    KK E E KR           KR+ + E         +DR   Q D  +KFEKYT T+VP E++LMEI+D  LL  P  +K+ P+ R K +Y
Subjt:  MSVEELLKSKKTEREHKRFSSSNYDSKKDKRQWTDEGGRGRADHGRDR-SDQGDYLKKFEKYTRTSVPQERILMEIRDTNLLSAPRKLKSNPDNRDKSQY

Query:  CLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTAKAEA
        CLFHRDHGH+T +C  LK+E+E LIR GYLKE+    +A
Subjt:  CLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTAKAEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGTAGAGGAGTTGCTCAAGTCAAAGAAGACGGAACGAGAGCACAAGAGGTTTTCTTCATCTAATTACGACAGTAAGAAGGACAAAAGGCAGTGGACCGACGAGGG
AGGCCGAGGCCGAGCAGACCATGGCCGAGACCGATCAGACCAAGGAGACTACTTGAAGAAGTTTGAAAAATACACCCGTACTTCAGTCCCACAGGAGCGGATCTTGATGG
AGATACGGGATACAAACCTGCTCAGCGCGCCCAGGAAGCTGAAGTCAAATCCCGACAACAGAGACAAAAGCCAGTATTGTCTCTTCCATCGAGATCATGGACATTCAACA
AGGAATTGCATTCAGCTAAAGGACGAGATTGAAGCACTTATCCGGAACGGATACCTGAAGGAATTCACTGCAAAGGCCGAGGCCTACCAGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGTAGAGGAGTTGCTCAAGTCAAAGAAGACGGAACGAGAGCACAAGAGGTTTTCTTCATCTAATTACGACAGTAAGAAGGACAAAAGGCAGTGGACCGACGAGGG
AGGCCGAGGCCGAGCAGACCATGGCCGAGACCGATCAGACCAAGGAGACTACTTGAAGAAGTTTGAAAAATACACCCGTACTTCAGTCCCACAGGAGCGGATCTTGATGG
AGATACGGGATACAAACCTGCTCAGCGCGCCCAGGAAGCTGAAGTCAAATCCCGACAACAGAGACAAAAGCCAGTATTGTCTCTTCCATCGAGATCATGGACATTCAACA
AGGAATTGCATTCAGCTAAAGGACGAGATTGAAGCACTTATCCGGAACGGATACCTGAAGGAATTCACTGCAAAGGCCGAGGCCTACCAGAGATGA
Protein sequenceShow/hide protein sequence
MSVEELLKSKKTEREHKRFSSSNYDSKKDKRQWTDEGGRGRADHGRDRSDQGDYLKKFEKYTRTSVPQERILMEIRDTNLLSAPRKLKSNPDNRDKSQYCLFHRDHGHST
RNCIQLKDEIEALIRNGYLKEFTAKAEAYQR