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Lag0035368 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035368
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:20463188..20463586
RNA-Seq ExpressionLag0035368
SyntenyLag0035368
Gene Ontology termsGO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH07150.1 TatD related DNase [Prunus dulcis]8.9e-2346.28Show/hide
Query:  LETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQVDSRTLNDYCPISLISCAYKIIARVLSN
        LE PF  EEV   V   G +KS GPDGF+  F ++ W  +K D+M ++ +F+ SGI+N   NET+ICLIPK+ +S  + D+ PISL++  YK+I++VL++
Subjt:  LETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQVDSRTLNDYCPISLISCAYKIIARVLSN

Query:  RIKQVLPFTIVESQMVFVSNR
        R+++VL  TI +SQ  FV  R
Subjt:  RIKQVLPFTIVESQMVFVSNR

KAA0046762.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.3e-2347.62Show/hide
Query:  SQSFALETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQVDSRTLNDYCPISLISCAYKIIA
        S+   L  PF E+E+  ++ SL   K+ GPDGF   F K+ W  +K D+M I  +FY  G+IN  +N TYI LIPK+ D     D+ PISL +  YKIIA
Subjt:  SQSFALETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQVDSRTLNDYCPISLISCAYKIIA

Query:  RVLSNRIKQVLPFTIVESQMVFVSNR
        + LSNR+K  LP TI E+Q+ FV NR
Subjt:  RVLSNRIKQVLPFTIVESQMVFVSNR

RZB91741.1 Kinesin-like protein KIN-12E, partial [Glycine soja]5.2e-2347.46Show/hide
Query:  PFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQVDSRTLNDYCPISLISCAYKIIARVLSNRIK
        PF EEE+YS V S G++KS GPDGF   F K+ WN +K + +    EFY + +    LN ++I LIPK  D + ++D+ PISLI C YKI+A+VLSNR+ 
Subjt:  PFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQVDSRTLNDYCPISLISCAYKIIARVLSNRIK

Query:  QVLPFTIVESQMVFVSNR
        +V+   I E Q+ FV  R
Subjt:  QVLPFTIVESQMVFVSNR

XP_014632966.1 uncharacterized protein LOC106799285 [Glycine max]3.1e-2347.11Show/hide
Query:  LETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQVDSRTLNDYCPISLISCAYKIIARVLSN
        L  PF EEEV   +   G++KS GPDG    F KN W  +K D++  + EFY +GI     N +++ LIPK+VD + LNDY PISLI C YKI+A++L+ 
Subjt:  LETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQVDSRTLNDYCPISLISCAYKIIARVLSN

Query:  RIKQVLPFTIVESQMVFVSNR
        R+K VLP  I E+Q  F+  R
Subjt:  RIKQVLPFTIVESQMVFVSNR

XP_023518084.1 uncharacterized protein LOC111781628 [Cucurbita pepo subsp. pepo]2.0e-3054.4Show/hide
Query:  QSFALETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQVDSRTLNDYCPISLISCAYKIIAR
        Q+ +LE  FTEEEV   +Q+LG++K+ GPDGFTSEF +  WN +++D+M + ++F+ +G+IN  LNETYI LI K++D+RT+ D+ PISL +  YKIIAR
Subjt:  QSFALETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQVDSRTLNDYCPISLISCAYKIIAR

Query:  VLSNRIKQVLPFTIVESQMVFVSNR
        VLS R+K+VLPFTI   Q+ FV  R
Subjt:  VLSNRIKQVLPFTIVESQMVFVSNR

TrEMBL top hitse value%identityAlignment
A0A445J031 Kinesin-like protein KIN-12E (Fragment)2.5e-2347.46Show/hide
Query:  PFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQVDSRTLNDYCPISLISCAYKIIARVLSNRIK
        PF EEE+YS V S G++KS GPDGF   F K+ WN +K + +    EFY + +    LN ++I LIPK  D + ++D+ PISLI C YKI+A+VLSNR+ 
Subjt:  PFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQVDSRTLNDYCPISLISCAYKIIARVLSNRIK

Query:  QVLPFTIVESQMVFVSNR
        +V+   I E Q+ FV  R
Subjt:  QVLPFTIVESQMVFVSNR

A0A5A7TTK1 LINE-1 retrotransposable element ORF2 protein1.1e-2347.62Show/hide
Query:  SQSFALETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQVDSRTLNDYCPISLISCAYKIIA
        S+   L  PF E+E+  ++ SL   K+ GPDGF   F K+ W  +K D+M I  +FY  G+IN  +N TYI LIPK+ D     D+ PISL +  YKIIA
Subjt:  SQSFALETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQVDSRTLNDYCPISLISCAYKIIA

Query:  RVLSNRIKQVLPFTIVESQMVFVSNR
        + LSNR+K  LP TI E+Q+ FV NR
Subjt:  RVLSNRIKQVLPFTIVESQMVFVSNR

M5WKV4 Reverse transcriptase domain-containing protein (Fragment)1.9e-2347.11Show/hide
Query:  LETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQVDSRTLNDYCPISLISCAYKIIARVLSN
        LE PF  EEV   V   G +KS GPDGF+  F ++ W  +K D+M ++ +F+ SGI+N   NET+ICLIPK+ +S  + DY PISL++  YK+I++VL++
Subjt:  LETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQVDSRTLNDYCPISLISCAYKIIARVLSN

Query:  RIKQVLPFTIVESQMVFVSNR
        R+++VL  TI +SQ  FV  R
Subjt:  RIKQVLPFTIVESQMVFVSNR

M5WPQ5 Reverse transcriptase domain-containing protein1.5e-2347.11Show/hide
Query:  LETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQVDSRTLNDYCPISLISCAYKIIARVLSN
        LE PF  EEV   V   G +KS GPDGF+  F ++ W  +K D+M ++ +F+ SGI+N   NET+ICLIPK+ +S  + DY PISL++  YK+I++VL++
Subjt:  LETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQVDSRTLNDYCPISLISCAYKIIARVLSN

Query:  RIKQVLPFTIVESQMVFVSNR
        R+++VL  TI +SQ  FV  R
Subjt:  RIKQVLPFTIVESQMVFVSNR

M5X4S0 Reverse transcriptase domain-containing protein (Fragment)1.5e-2347.11Show/hide
Query:  LETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQVDSRTLNDYCPISLISCAYKIIARVLSN
        LE PF  EEV   V   G +KS GPDGF+  F ++ W  +K D+M ++ +F+ SGI+N   NET+ICLIPK+ +S  + DY PISL++  YK+I++VL++
Subjt:  LETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQVDSRTLNDYCPISLISCAYKIIARVLSN

Query:  RIKQVLPFTIVESQMVFVSNR
        R+++VL  TI +SQ  FV  R
Subjt:  RIKQVLPFTIVESQMVFVSNR

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein3.6e-1133.59Show/hide
Query:  RTNASQSFALETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQ-VDSRTLNDYCPISLISCA
        R N  +  +L  P T  E+ +I+ SL T KS GPDGFT+EF +     +   ++ +       GI+  +  E  I LIPK   D+    ++ PISL++  
Subjt:  RTNASQSFALETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQ-VDSRTLNDYCPISLISCA

Query:  YKIIARVLSNRIKQVLPFTIVESQMVFV
         KI+ ++L+NRI+Q +   I   Q+ F+
Subjt:  YKIIARVLSNRIKQVLPFTIVESQMVFV

P08548 LINE-1 reverse transcriptase homolog1.4e-1036.59Show/hide
Query:  LETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGS----GIINVALNETYICLIPKQ-VDSRTLNDYCPISLISCAYKIIA
        L  P +  E+ S +Q+L   KS GPDGFTSEF    + T K +++ IL   + +    GI+     E  I LIPK   D     +Y PISL++   KI+ 
Subjt:  LETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGS----GIINVALNETYICLIPKQ-VDSRTLNDYCPISLISCAYKIIA

Query:  RVLSNRIKQVLPFTIVESQMVFV
        ++L+NRI+Q +   I   Q+ F+
Subjt:  RVLSNRIKQVLPFTIVESQMVFV

P11369 LINE-1 retrotransposable element ORF2 protein1.3e-1133.33Show/hide
Query:  RTNASQSFALETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYG----SGIINVALNETYICLIPK-QVDSRTLNDYCPISL
        + N  Q   L +P + +E+ +++ SL T KS GPDGF++EF    + T K D++ IL++ +      G +  +  E  I LIPK Q D   + ++ PISL
Subjt:  RTNASQSFALETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYG----SGIINVALNETYICLIPK-QVDSRTLNDYCPISL

Query:  ISCAYKIIARVLSNRIKQVLPFTIVESQMVFV
        ++   KI+ ++L+NRI++ +   I   Q+ F+
Subjt:  ISCAYKIIARVLSNRIKQVLPFTIVESQMVFV

P14381 Transposon TX1 uncharacterized 149 kDa protein1.0e-1335.54Show/hide
Query:  LETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQVDSRTLNDYCPISLISCAYKIIARVLSN
        LETP T +E+   ++ +  NKS G DG T EF +  W+T+  D   +L E +  G + ++     + L+PK+ D R + ++ P+SL+S  YKI+A+ +S 
Subjt:  LETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQVDSRTLNDYCPISLISCAYKIIARVLSN

Query:  RIKQVLPFTIVESQMVFVSNR
        R+K VL   I   Q   V  R
Subjt:  RIKQVLPFTIVESQMVFVSNR

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein4.1e-1033.98Show/hide
Query:  RTNASQSFALETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQVDSRTLNDYCPISLISCAY
        R N + +  L    +++E+ + V ++  NK+ GPD FT+EF   SW  +K   +A + EF+ +G +    N T I LIPK      L+ + P+S  +  Y
Subjt:  RTNASQSFALETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQVDSRTLNDYCPISLISCAY

Query:  KII
        KII
Subjt:  KII


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGGACTAATGCCTCCCAATCATTTGCTCTAGAAACTCCCTTTACCGAAGAGGAGGTTTACTCTATTGTGCAATCTCTGGGAACTAATAAATCTTCTGGTCCTGA
CGGTTTTACTTCTGAATTCTGTAAGAACTCATGGAACACTATTAAGCTTGACGTTATGGCAATTTTGTATGAGTTTTATGGCAGTGGAATCATTAATGTGGCTTTGAATG
AAACTTATATCTGTCTCATTCCTAAGCAAGTTGATTCTAGAACGTTAAATGATTATTGTCCCATTAGTCTTATTTCTTGTGCTTACAAGATCATTGCTCGTGTTTTATCT
AATCGAATTAAGCAAGTCCTTCCTTTCACCATTGTTGAAAGTCAGATGGTCTTTGTATCTAATCGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAGGACTAATGCCTCCCAATCATTTGCTCTAGAAACTCCCTTTACCGAAGAGGAGGTTTACTCTATTGTGCAATCTCTGGGAACTAATAAATCTTCTGGTCCTGA
CGGTTTTACTTCTGAATTCTGTAAGAACTCATGGAACACTATTAAGCTTGACGTTATGGCAATTTTGTATGAGTTTTATGGCAGTGGAATCATTAATGTGGCTTTGAATG
AAACTTATATCTGTCTCATTCCTAAGCAAGTTGATTCTAGAACGTTAAATGATTATTGTCCCATTAGTCTTATTTCTTGTGCTTACAAGATCATTGCTCGTGTTTTATCT
AATCGAATTAAGCAAGTCCTTCCTTTCACCATTGTTGAAAGTCAGATGGTCTTTGTATCTAATCGATAA
Protein sequenceShow/hide protein sequence
MGRTNASQSFALETPFTEEEVYSIVQSLGTNKSSGPDGFTSEFCKNSWNTIKLDVMAILYEFYGSGIINVALNETYICLIPKQVDSRTLNDYCPISLISCAYKIIARVLS
NRIKQVLPFTIVESQMVFVSNR