| GenBank top hits | e value | %identity | Alignment |
|---|
| KAD3338048.1 hypothetical protein E3N88_33569 [Mikania micrantha] | 3.9e-70 | 39.68 | Show/hide |
Query: IKSVDSENWLLAMKQVLWSLHSNNKWKLVEKPENKKIIDCKWVLKLKPGFKNNDKPRYKVKFVAKGFSQVEGIDYTEVFS------SIRILLSIVVQHNL
I S D ENW+ AM + + SL+ N W+LV+KP N+K++DCKWV KLK G + +KPRYK + VAKGF+Q EGIDYTE+FS SIR++L++ ++L
Subjt: IKSVDSENWLLAMKQVLWSLHSNNKWKLVEKPENKKIIDCKWVLKLKPGFKNNDKPRYKVKFVAKGFSQVEGIDYTEVFS------SIRILLSIVVQHNL
Query: ELEQMDVTTVFLYGSLDENIFMKQPLGFAEK----------------------------------------------------GKEIH----------AS
ELEQ+DV T FL+G LDE I+MKQPLGF +K G+ ++ A
Subjt: ELEQMDVTTVFLYGSLDENIFMKQPLGFAEK----------------------------------------------------GKEIH----------AS
Query: IDKLEIQKVKAAFSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSAYYHKIVKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVG
DK +IQ VK +EF MK+LG +KILGM++ RD+++ L LSQS+Y K++K MEN K V TP+AQHF+LS + P T EEI +M +PY N VG
Subjt: IDKLEIQKVKAAFSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSAYYHKIVKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVG
Query: SLMYTMVCSRLDITHALSVVSRYMSNSVSLFGQAVFTNMIYIHS-------FWECN------------------------------------RLEINIQS
SLMY MVC+R DI +A+S+VSR++SN L AV + Y++ F + N + N+Q
Subjt: SLMYTMVCSRLDITHALSVVSRYMSNSVSLFGQAVFTNMIYIHS-------FWECN------------------------------------RLEINIQS
Query: VIALSLTEAEYIALAELVKEAIWLQEQRCESGFSRV
V+ALS TE+EYIAL E VKEA+WL+ + GF +V
Subjt: VIALSLTEAEYIALAELVKEAIWLQEQRCESGFSRV
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| KAG8493840.1 hypothetical protein CXB51_011133 [Gossypium anomalum] | 1.3e-68 | 43.09 | Show/hide |
Query: IKSVDSENWLLAMKQVLWSLHSNNKWKLVEKPENKKIIDCKWVLKLKPGFKNNDKPRYKVKFVAKGFSQVEGIDYTEVF------SSIRILLSIVVQHNL
I DSE W+ AM++ + SLH N W LV+ P+ KK + CKWV K K G ++P+YK + VAKG+SQV G+D+T+VF SSIR LL IV H+L
Subjt: IKSVDSENWLLAMKQVLWSLHSNNKWKLVEKPENKKIIDCKWVLKLKPGFKNNDKPRYKVKFVAKGFSQVEGIDYTEVF------SSIRILLSIVVQHNL
Query: ELEQMDVTTVFLYGSLDENIFMKQPLGFAEKGKE---------IHASIDKLEIQKVKAAFSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSAYYHKI
ELEQ+DV T FL+G L+E+I+M+QP GF KE ++A+ DK EI+KV+A S+EF MKDLG +KILGM++LRD+ + L LSQ Y K+
Subjt: ELEQMDVTTVFLYGSLDENIFMKQPLGFAEKGKE---------IHASIDKLEIQKVKAAFSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSAYYHKI
Query: VKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVGSLMYTMVCSRLDITHALSVVSRYMSNSVSLFGQAVFTNMIYIHSFWE-CNRL-
+ + +M ++K V TPLA HF+LS A +P + +EI MS +PY + VGSLMY MVCSR D+++A+S VSRYM+N +AV + Y+ + C +
Subjt: VKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVGSLMYTMVCSRLDITHALSVVSRYMSNSVSLFGQAVFTNMIYIHSFWE-CNRL-
Query: --------------------------------------EINIQSVIALSLTEAEYIALAELVKEAIWLQ
+ +Q+ +ALS TEAEY+A+ E KEAIWL+
Subjt: --------------------------------------EINIQSVIALSLTEAEYIALAELVKEAIWLQ
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| KAG8493840.1 hypothetical protein CXB51_011133 [Gossypium anomalum] | 1.3e-01 | 38.03 | Show/hide |
Query: SAKVELEKFDGKGNFMRWKRKMKALLVQQKVAKALLEPGKLPSTLTKDEKEEMCEIAYSSIILHLADNVLR
S K E+ D F W+ KM+A+L Q + ALL K+PSTLT +EK+ A + + LHL++ +L+
Subjt: SAKVELEKFDGKGNFMRWKRKMKALLVQQKVAKALLEPGKLPSTLTKDEKEEMCEIAYSSIILHLADNVLR
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| KAG8493840.1 hypothetical protein CXB51_011133 [Gossypium anomalum] | 6.3e-68 | 40.39 | Show/hide |
Query: IKSVDSENWLLAMKQVLWSLHSNNKWKLVEKPENKKIIDCKWVLKLKPGFKNNDKPRYKVKFVAKGFSQVEGIDYTEVFS------SIRILLSIVVQHNL
I SVD E W+ AM + + SLH W+LV++P N+K++DCKW+ KLK G + +PRYK + VAKGF+Q EGIDYTE+FS SIR++L+I V ++L
Subjt: IKSVDSENWLLAMKQVLWSLHSNNKWKLVEKPENKKIIDCKWVLKLKPGFKNNDKPRYKVKFVAKGFSQVEGIDYTEVFS------SIRILLSIVVQHNL
Query: ELEQMDVTTVFLYGSLDENIFMKQPLGFAEKGKE---------------------------------IHASIDKL-------------------------
ELEQ+DV T FL+G LDE I+MKQPLGF ++G+E I ++ D
Subjt: ELEQMDVTTVFLYGSLDENIFMKQPLGFAEKGKE---------------------------------IHASIDKL-------------------------
Query: ----EIQKVKAAFSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSAYYHKIVKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVG
+I VK EF MK+LG +KILG+++ RD+ L L+Q +Y K++ MENSK V TPLAQHF+LS P E+ DM +PY N VG
Subjt: ----EIQKVKAAFSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSAYYHKIVKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVG
Query: SLMYTMVCSRLDITHALSVVSRYMSNSVSLFGQAVFTNMIYIHS-------FWECNRLE-----------INIQSVIALSLTEAEYIALAELVKEAIWLQ
SLMY MVC+R DI +A+SVVSR+++N + +AV M Y++ F + + +E +Q V+ALS TE+EYIAL E VKEAIWL+
Subjt: SLMYTMVCSRLDITHALSVVSRYMSNSVSLFGQAVFTNMIYIHS-------FWECNRLE-----------INIQSVIALSLTEAEYIALAELVKEAIWLQ
Query: EQRCESGFSRV
+ GF++V
Subjt: EQRCESGFSRV
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| KAG8499473.1 hypothetical protein CXB51_005963 [Gossypium anomalum] | 1.4e-67 | 44.19 | Show/hide |
Query: DSENWLLAMKQVLWSLHSNNKWKLVEKPENKKIIDCKWVLKLKPGFKNNDKPRYKVKFVAKGFSQVEGIDYTEVF------SSIRILLSIVVQHNLELEQ
DSE W+ AM++ + SLH N W LV+ P+ KK++ CKWV K K ++PRYK + VAKG+SQ+ G+D+T+VF SSIR LL VV H+LELEQ
Subjt: DSENWLLAMKQVLWSLHSNNKWKLVEKPENKKIIDCKWVLKLKPGFKNNDKPRYKVKFVAKGFSQVEGIDYTEVF------SSIRILLSIVVQHNLELEQ
Query: MDVTTVFLYGSLDENIFMKQPLGFAEKGKE-------------------------------------IHASIDKLEIQKVKAAFSKEFGMKDLGKTRKIL
+DV TVFL+G L+E+I+MKQP GF KE + A+ DK EI+KVKA S+EF MKDLG +KIL
Subjt: MDVTTVFLYGSLDENIFMKQPLGFAEKGKE-------------------------------------IHASIDKLEIQKVKAAFSKEFGMKDLGKTRKIL
Query: GMKMLRDQSRNTLLLSQSAYYHKIVKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVGSLMYTMVCSRLDITHALSVVSRYMSNSVS
GM++LRD+ + L LSQ Y K++ + +M+++K V TPLA HF+LS A +P + +EI MS +PY + +GSLMY MVCSRLD+++A+S VSRYM+N V
Subjt: GMKMLRDQSRNTLLLSQSAYYHKIVKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVGSLMYTMVCSRLDITHALSVVSRYMSNSVS
Query: LFGQAVFTNMIYIHSFWECNRLEINIQSVIALSLTEAEYIALAELVKEAIWLQ
ALS TEAEY+A+ E KEAIWL+
Subjt: LFGQAVFTNMIYIHSFWECNRLEINIQSVIALSLTEAEYIALAELVKEAIWLQ
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| RZC25599.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine soja] | 2.0e-66 | 36.64 | Show/hide |
Query: EIAYSSIILHLADNVLRRTHSCTLLTADIFSVSTDTDQYRLSGLMQTHCIGYPHSH---------VSYTNELHRNVCIKYKVGPIKSVDSENWLLAMKQV
E+ +S I+ H + + + T + ++ D Y+L+ + I P + +S E+ + ++ I+S DS+ WL AM +
Subjt: EIAYSSIILHLADNVLRRTHSCTLLTADIFSVSTDTDQYRLSGLMQTHCIGYPHSH---------VSYTNELHRNVCIKYKVGPIKSVDSENWLLAMKQV
Query: LWSLHSNNKWKLVEKPENKKIIDCKWVLKLKPGFKNNDKPRYKVKFVAKGFSQVEGIDYTEVFS------SIRILLSIVVQHNLELEQMDVTTVFLYGSL
+ SL N W LV++P+ +K++ CKW+ K K G ++PR+K + VAKGF+QVEGIDY ++FS SIRI+LS+V Q++LELEQ+DV T FL+ +L
Subjt: LWSLHSNNKWKLVEKPENKKIIDCKWVLKLKPGFKNNDKPRYKVKFVAKGFSQVEGIDYTEVFS------SIRILLSIVVQHNLELEQMDVTTVFLYGSL
Query: DENIFMKQPLGFAE-----------------KGKEIH-------------ASIDKLEIQKVKAAFSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSA
E I+M QP GF E K ++H AS +K EI+K+K + + EF MKDLG R+ILG+ + RD+++ L LSQS
Subjt: DENIFMKQPLGFAE-----------------KGKEIH-------------ASIDKLEIQKVKAAFSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSA
Query: YYHKIVKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVGSLMYTMVCSRLDITHALSVVSRYMSNSVSLFGQAVFTNMIYIHSFWEC
Y K+V++ M SK V TPL H +LS+ + P EE + M PY + VGS+MY MVCSR D+ H +S++S++M + S + V + W+
Subjt: YYHKIVKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVGSLMYTMVCSRLDITHALSVVSRYMSNSVSLFGQAVFTNMIYIHSFWEC
Query: NRLEINIQSVIALSLTEAEYIALAELVKEAIWLQEQRCESGFSRV-LRLECFSSVISETTNLQL
N+ QSV+ALS TE EY+ALAE VKEAIWL+ E G ++ + + C S N Q+
Subjt: NRLEINIQSVIALSLTEAEYIALAELVKEAIWLQEQRCESGFSRV-LRLECFSSVISETTNLQL
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| RZC25599.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine soja] | 4.6e-02 | 38.89 | Show/hide |
Query: NQKRKGSVETLQEQRPDAGSAKVELEKFDGKGNFMRWKRKMKALLVQQKVAKALLEPGKLPSTLTKDEKEEMCEIAYSSIILHLADNVLR
NQ SV T R G+ K ++EKF G+ +F W+ KM A+L+Q +AL ++ +L+ EK EM A S+IIL L D LR
Subjt: NQKRKGSVETLQEQRPDAGSAKVELEKFDGKGNFMRWKRKMKALLVQQKVAKALLEPGKLPSTLTKDEKEEMCEIAYSSIILHLADNVLR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A445LQL6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.8e-67 | 36.64 | Show/hide |
Query: EIAYSSIILHLADNVLRRTHSCTLLTADIFSVSTDTDQYRLSGLMQTHCIGYPHSH---------VSYTNELHRNVCIKYKVGPIKSVDSENWLLAMKQV
E+ +S I+ H + + + T + ++ D Y+L+ + I P + +S E+ + ++ I+S DS+ WL AM +
Subjt: EIAYSSIILHLADNVLRRTHSCTLLTADIFSVSTDTDQYRLSGLMQTHCIGYPHSH---------VSYTNELHRNVCIKYKVGPIKSVDSENWLLAMKQV
Query: LWSLHSNNKWKLVEKPENKKIIDCKWVLKLKPGFKNNDKPRYKVKFVAKGFSQVEGIDYTEVFS------SIRILLSIVVQHNLELEQMDVTTVFLYGSL
+ SL N W LV++P+ +K++ CKW+ K K G ++PR+K + VAKGF+QVEGIDY ++FS SIRI+LS+V Q++LELEQ+DV T FL+ +L
Subjt: LWSLHSNNKWKLVEKPENKKIIDCKWVLKLKPGFKNNDKPRYKVKFVAKGFSQVEGIDYTEVFS------SIRILLSIVVQHNLELEQMDVTTVFLYGSL
Query: DENIFMKQPLGFAE-----------------KGKEIH-------------ASIDKLEIQKVKAAFSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSA
E I+M QP GF E K ++H AS +K EI+K+K + + EF MKDLG R+ILG+ + RD+++ L LSQS
Subjt: DENIFMKQPLGFAE-----------------KGKEIH-------------ASIDKLEIQKVKAAFSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSA
Query: YYHKIVKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVGSLMYTMVCSRLDITHALSVVSRYMSNSVSLFGQAVFTNMIYIHSFWEC
Y K+V++ M SK V TPL H +LS+ + P EE + M PY + VGS+MY MVCSR D+ H +S++S++M + S + V + W+
Subjt: YYHKIVKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVGSLMYTMVCSRLDITHALSVVSRYMSNSVSLFGQAVFTNMIYIHSFWEC
Query: NRLEINIQSVIALSLTEAEYIALAELVKEAIWLQEQRCESGFSRV-LRLECFSSVISETTNLQL
N+ QSV+ALS TE EY+ALAE VKEAIWL+ E G ++ + + C S N Q+
Subjt: NRLEINIQSVIALSLTEAEYIALAELVKEAIWLQEQRCESGFSRV-LRLECFSSVISETTNLQL
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| A0A445LQL6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.2e-02 | 38.89 | Show/hide |
Query: NQKRKGSVETLQEQRPDAGSAKVELEKFDGKGNFMRWKRKMKALLVQQKVAKALLEPGKLPSTLTKDEKEEMCEIAYSSIILHLADNVLR
NQ SV T R G+ K ++EKF G+ +F W+ KM A+L+Q +AL ++ +L+ EK EM A S+IIL L D LR
Subjt: NQKRKGSVETLQEQRPDAGSAKVELEKFDGKGNFMRWKRKMKALLVQQKVAKALLEPGKLPSTLTKDEKEEMCEIAYSSIILHLADNVLR
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| A0A445LQL6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.5e-64 | 37.05 | Show/hide |
Query: IKSVDSENWLLAMKQVLWSLHSNNKWKLVEKPENKKIIDCKWVLKLKPGFKNNDKPRYKVKFVAKGFSQVEGIDYTEVF------SSIRILLSIVVQHNL
++ DSENW+ AM + + SL N+ W++V P+ KK I CKW+ K K G +++ P+YK + VA+G+SQ+ G+DY +VF SSIR LSIV H+L
Subjt: IKSVDSENWLLAMKQVLWSLHSNNKWKLVEKPENKKIIDCKWVLKLKPGFKNNDKPRYKVKFVAKGFSQVEGIDYTEVF------SSIRILLSIVVQHNL
Query: ELEQMDVTTVFLYGSLDENIFMKQPLGFAEKGKE-------------------------------------------------------------IHASI
ELEQ+DV T FL+G L+E+I+M QP GF GKE + A+
Subjt: ELEQMDVTTVFLYGSLDENIFMKQPLGFAEKGKE-------------------------------------------------------------IHASI
Query: DKLEIQKVKAAFSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSAYYHKIVKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVGS
K+EI K+K S EF MKDLG +KILGM++ RD+ L LSQ Y K++++ +M+N+KAV TP+A HF+LS A+ P+ EI MS +PY + VGS
Subjt: DKLEIQKVKAAFSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSAYYHKIVKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVGS
Query: LMYTMVCSRLDITHALSVVSRYMSN---------------------SVSLFGQAVFTNMIYIHSFWECN-------------------RLEINIQSVIAL
LMY MVCSR D+++A+S+VSRYMSN S FG+ + Y+ S + + +QSV+AL
Subjt: LMYTMVCSRLDITHALSVVSRYMSN---------------------SVSLFGQAVFTNMIYIHSFWECN-------------------RLEINIQSVIAL
Query: SLTEAEYIALAELVKEAIWLQEQRCE-SGFSRVLRLECFS
S TEAEY+A+ E KE IWL+ E SG + L C S
Subjt: SLTEAEYIALAELVKEAIWLQEQRCE-SGFSRVLRLECFS
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| A0A5N6ME75 Integrase catalytic domain-containing protein | 1.9e-70 | 39.68 | Show/hide |
Query: IKSVDSENWLLAMKQVLWSLHSNNKWKLVEKPENKKIIDCKWVLKLKPGFKNNDKPRYKVKFVAKGFSQVEGIDYTEVFS------SIRILLSIVVQHNL
I S D ENW+ AM + + SL+ N W+LV+KP N+K++DCKWV KLK G + +KPRYK + VAKGF+Q EGIDYTE+FS SIR++L++ ++L
Subjt: IKSVDSENWLLAMKQVLWSLHSNNKWKLVEKPENKKIIDCKWVLKLKPGFKNNDKPRYKVKFVAKGFSQVEGIDYTEVFS------SIRILLSIVVQHNL
Query: ELEQMDVTTVFLYGSLDENIFMKQPLGFAEK----------------------------------------------------GKEIH----------AS
ELEQ+DV T FL+G LDE I+MKQPLGF +K G+ ++ A
Subjt: ELEQMDVTTVFLYGSLDENIFMKQPLGFAEK----------------------------------------------------GKEIH----------AS
Query: IDKLEIQKVKAAFSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSAYYHKIVKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVG
DK +IQ VK +EF MK+LG +KILGM++ RD+++ L LSQS+Y K++K MEN K V TP+AQHF+LS + P T EEI +M +PY N VG
Subjt: IDKLEIQKVKAAFSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSAYYHKIVKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVG
Query: SLMYTMVCSRLDITHALSVVSRYMSNSVSLFGQAVFTNMIYIHS-------FWECN------------------------------------RLEINIQS
SLMY MVC+R DI +A+S+VSR++SN L AV + Y++ F + N + N+Q
Subjt: SLMYTMVCSRLDITHALSVVSRYMSNSVSLFGQAVFTNMIYIHS-------FWECN------------------------------------RLEINIQS
Query: VIALSLTEAEYIALAELVKEAIWLQEQRCESGFSRV
V+ALS TE+EYIAL E VKEA+WL+ + GF +V
Subjt: VIALSLTEAEYIALAELVKEAIWLQEQRCESGFSRV
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| A0A5N6MW65 Integrase catalytic domain-containing protein | 3.0e-68 | 40.39 | Show/hide |
Query: IKSVDSENWLLAMKQVLWSLHSNNKWKLVEKPENKKIIDCKWVLKLKPGFKNNDKPRYKVKFVAKGFSQVEGIDYTEVFS------SIRILLSIVVQHNL
I SVD E W+ AM + + SLH W+LV++P N+K++DCKW+ KLK G + +PRYK + VAKGF+Q EGIDYTE+FS SIR++L+I V ++L
Subjt: IKSVDSENWLLAMKQVLWSLHSNNKWKLVEKPENKKIIDCKWVLKLKPGFKNNDKPRYKVKFVAKGFSQVEGIDYTEVFS------SIRILLSIVVQHNL
Query: ELEQMDVTTVFLYGSLDENIFMKQPLGFAEKGKE---------------------------------IHASIDKL-------------------------
ELEQ+DV T FL+G LDE I+MKQPLGF ++G+E I ++ D
Subjt: ELEQMDVTTVFLYGSLDENIFMKQPLGFAEKGKE---------------------------------IHASIDKL-------------------------
Query: ----EIQKVKAAFSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSAYYHKIVKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVG
+I VK EF MK+LG +KILG+++ RD+ L L+Q +Y K++ MENSK V TPLAQHF+LS P E+ DM +PY N VG
Subjt: ----EIQKVKAAFSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSAYYHKIVKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVG
Query: SLMYTMVCSRLDITHALSVVSRYMSNSVSLFGQAVFTNMIYIHS-------FWECNRLE-----------INIQSVIALSLTEAEYIALAELVKEAIWLQ
SLMY MVC+R DI +A+SVVSR+++N + +AV M Y++ F + + +E +Q V+ALS TE+EYIAL E VKEAIWL+
Subjt: SLMYTMVCSRLDITHALSVVSRYMSNSVSLFGQAVFTNMIYIHS-------FWECNRLE-----------INIQSVIALSLTEAEYIALAELVKEAIWLQ
Query: EQRCESGFSRV
+ GF++V
Subjt: EQRCESGFSRV
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| Q2QQ81 Retrotransposon protein, putative, Ty1-copia subclass | 4.5e-64 | 37.05 | Show/hide |
Query: IKSVDSENWLLAMKQVLWSLHSNNKWKLVEKPENKKIIDCKWVLKLKPGFKNNDKPRYKVKFVAKGFSQVEGIDYTEVF------SSIRILLSIVVQHNL
++ DSENW+ AM + + SL N+ W++V P+ KK I CKW+ K K G +++ P+YK + VA+G+SQ+ G+DY +VF SSIR LSIV H+L
Subjt: IKSVDSENWLLAMKQVLWSLHSNNKWKLVEKPENKKIIDCKWVLKLKPGFKNNDKPRYKVKFVAKGFSQVEGIDYTEVF------SSIRILLSIVVQHNL
Query: ELEQMDVTTVFLYGSLDENIFMKQPLGFAEKGKE-------------------------------------------------------------IHASI
ELEQ+DV T FL+G L+E+I+M QP GF GKE + A+
Subjt: ELEQMDVTTVFLYGSLDENIFMKQPLGFAEKGKE-------------------------------------------------------------IHASI
Query: DKLEIQKVKAAFSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSAYYHKIVKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVGS
K+EI K+K S EF MKDLG +KILGM++ RD+ L LSQ Y K++++ +M+N+KAV TP+A HF+LS A+ P+ EI MS +PY + VGS
Subjt: DKLEIQKVKAAFSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSAYYHKIVKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVGS
Query: LMYTMVCSRLDITHALSVVSRYMSN---------------------SVSLFGQAVFTNMIYIHSFWECN-------------------RLEINIQSVIAL
LMY MVCSR D+++A+S+VSRYMSN S FG+ + Y+ S + + +QSV+AL
Subjt: LMYTMVCSRLDITHALSVVSRYMSN---------------------SVSLFGQAVFTNMIYIHSFWECN-------------------RLEINIQSVIAL
Query: SLTEAEYIALAELVKEAIWLQEQRCE-SGFSRVLRLECFS
S TEAEY+A+ E KE IWL+ E SG + L C S
Subjt: SLTEAEYIALAELVKEAIWLQEQRCE-SGFSRVLRLECFS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 8.0e-34 | 29.93 | Show/hide |
Query: DSENWLLAMKQVLWSLHSNNKWKLVEKPENKKIIDCKWVLKLKPGFKNNDKPRYKVKFVAKGFSQVEGIDYTEVF------SSIRILLSIVVQHNLELEQ
D +W A+ L + NN W + ++PENK I+D +WV +K N RYK + VA+GF+Q IDY E F SS R +LS+V+Q+NL++ Q
Subjt: DSENWLLAMKQVLWSLHSNNKWKLVEKPENKKIIDCKWVLKLKPGFKNNDKPRYKVKFVAKGFSQVEGIDYTEVF------SSIRILLSIVVQHNLELEQ
Query: MDVTTVFLYGSLDENIFMKQPLG----------------------------FAEKGKE---IHASIDK------------------------------LE
MDV T FL G+L E I+M+ P G F + KE +++S+D+
Subjt: MDVTTVFLYGSLDENIFMKQPLG----------------------------FAEKGKE---IHASIDK------------------------------LE
Query: IQKVKAAFSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSAYYHKIVKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVGSLMYT
+ K ++F M DL + + +G+++ + + + LSQSAY KI+ K +MEN AV TPL + + E+ N P +L+G LMY
Subjt: IQKVKAAFSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSAYYHKIVKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVGSLMYT
Query: MVCSRLDITHALSVVSRYMSNSVSLFGQ----------------------AVFTNMI--YIHSFW---ECNR----------LEINI-------QSVIAL
M+C+R D+T A++++SRY S + S Q F N I Y+ S W E +R + N+ Q+ +A
Subjt: MVCSRLDITHALSVVSRYMSNSVSLFGQ----------------------AVFTNMI--YIHSFW---ECNR----------LEINI-------QSVIAL
Query: SLTEAEYIALAELVKEAIWLQ
S TEAEY+AL E V+EA+WL+
Subjt: SLTEAEYIALAELVKEAIWLQ
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.0e-49 | 34.76 | Show/hide |
Query: AMKQVLWSLHSNNKWKLVEKPENKKIIDCKWVLKLKPGFKNND--KPRYKVKFVAKGFSQVEGIDYTEVFS------SIRILLSIVVQHNLELEQMDVTT
AM++ + SL N +KLVE P+ K+ + CKWV KLK K+ D RYK + V KGF Q +GID+ E+FS SIR +LS+ +LE+EQ+DV T
Subjt: AMKQVLWSLHSNNKWKLVEKPENKKIIDCKWVLKLKPGFKNND--KPRYKVKFVAKGFSQVEGIDYTEVFS------SIRILLSIVVQHNLELEQMDVTT
Query: VFLYGSLDENIFMKQPLGFAEKGK-----EIHASI---------------------------------------------------------DKLEIQKV
FL+G L+E I+M+QP GF GK +++ S+ DK I K+
Subjt: VFLYGSLDENIFMKQPLGFAEKGK-----EIHASI---------------------------------------------------------DKLEIQKV
Query: KAAFSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSAYYHKIVKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVGSLMYTMVCS
K SK F MKDLG ++ILGMK++R+++ L LSQ Y +++++ +M+N+K V TPLA H +LS P T EE +M+ +PY + VGSLMY MVC+
Subjt: KAAFSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSAYYHKIVKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVGSLMYTMVCS
Query: RLDITHALSVVSRYMSNSVSLFGQAVFTNMIYIH-SFWEC-----------------------NR----------------LEINIQSVIALSLTEAEYI
R DI HA+ VVSR++ N +AV + Y+ + +C NR + +Q +ALS TEAEYI
Subjt: RLDITHALSVVSRYMSNSVSLFGQAVFTNMIYIH-SFWEC-----------------------NR----------------LEINIQSVIALSLTEAEYI
Query: ALAELVKEAIWLQEQRCESG
A E KE IWL+ E G
Subjt: ALAELVKEAIWLQEQRCESG
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.6e-05 | 39.71 | Show/hide |
Query: KVELEKFDGKGNFMRWKRKMKALLVQQKVAKALLEPGKLPSTLTKDEKEEMCEIAYSSIILHLADNVL
K E+ KF+G F W+R+M+ LL+QQ + K L K P T+ ++ ++ E A S+I LHL+D+V+
Subjt: KVELEKFDGKGNFMRWKRKMKALLVQQKVAKALLEPGKLPSTLTKDEKEEMCEIAYSSIILHLADNVL
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| P25600 Putative transposon Ty5-1 protein YCL074W | 2.7e-05 | 29.91 | Show/hide |
Query: KVKAAFSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSAYYHKIVKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVGSLMYTMV
+VK +K + MKDLGK K LG+ + S + LS Y K ++ + K +TPL L +P + D++ PY ++VG L++
Subjt: KVKAAFSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSAYYHKIVKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVGSLMYTMV
Query: CSRLDITHALSVVSRYM
R DI++ +S++SR++
Subjt: CSRLDITHALSVVSRYM
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 5.8e-16 | 25 | Show/hide |
Query: IKSVDSENWLLAMKQVLWSLHSNNKWKLV-EKPENKKIIDCKWVLKLKPGFKNNDKPRYKVKFVAKGFSQVEGIDYTEVFS------SIRILLSIVVQHN
I+++ E W AM + + N+ W LV P + I+ C+W+ K + RYK + VAKG++Q G+DY E FS SIRI+L + V +
Subjt: IKSVDSENWLLAMKQVLWSLHSNNKWKLV-EKPENKKIIDCKWVLKLKPGFKNNDKPRYKVKFVAKGFSQVEGIDYTEVFS------SIRILLSIVVQHN
Query: LELEQMDVTTVFLYGSLDENIFMKQPLGFAEKGKEIHASIDKLEIQKVKAA-------------------------------------------------
+ Q+DV FL G+L ++++M QP GF +K + + + + +K A
Subjt: LELEQMDVTTVFLYGSLDENIFMKQPLGFAEKGKEIHASIDKLEIQKVKAA-------------------------------------------------
Query: ------------FSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSAYYHKIVKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVG
S+ F +KD + LG++ R + L LSQ Y ++ + +M +K V TP+A +LS+ + Y +VG
Subjt: ------------FSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSAYYHKIVKKNHMENSKAVKTPLAQHFQLSMAKNPATQEEINDMSAIPYVNLVG
Query: SLMYTMVCSRLDITHALSVVSRYM
SL Y + +R DI++A++ +S++M
Subjt: SLMYTMVCSRLDITHALSVVSRYM
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 6.4e-15 | 24.5 | Show/hide |
Query: PHSHVSYTNELHRNVCIKYKVGPIKSVDSENWLLAMKQVLWSLHSNNKWKLV-EKPENKKIIDCKWVLKLKPGFKNNDKPRYKVKFVAKGFSQVEGIDYT
P+ SY L N I+++ + W AM + + N+ W LV P + I+ C+W+ K + RYK + VAKG++Q G+DY
Subjt: PHSHVSYTNELHRNVCIKYKVGPIKSVDSENWLLAMKQVLWSLHSNNKWKLV-EKPENKKIIDCKWVLKLKPGFKNNDKPRYKVKFVAKGFSQVEGIDYT
Query: EVFS------SIRILLSIVVQHNLELEQMDVTTVFLYGSLDENIFMKQPLGFAEK---------------------------------------------
E FS SIRI+L + V + + Q+DV FL G+L + ++M QP GF +K
Subjt: EVFS------SIRILLSIVVQHNLELEQMDVTTVFLYGSLDENIFMKQPLGFAEK---------------------------------------------
Query: -----GKEIHASI-----------DKLEIQKVKAAFSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSAYYHKIVKKNHMENSKAVKTPLAQHFQLSM
G+ I + D + ++ A S+ F +K+ LG++ R L LSQ Y ++ + +M +K V TP+A +L++
Subjt: -----GKEIHASI-----------DKLEIQKVKAAFSKEFGMKDLGKTRKILGMKMLRDQSRNTLLLSQSAYYHKIVKKNHMENSKAVKTPLAQHFQLSM
Query: AKNPATQEEINDMSAIPYVNLVGSLMYTMVCSRLDITHALSVVSRYM
+ Y +VGSL Y + +R D+++A++ +S+YM
Subjt: AKNPATQEEINDMSAIPYVNLVGSLMYTMVCSRLDITHALSVVSRYM
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