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Lag0035384 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035384
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr3:20663773..20664716
RNA-Seq ExpressionLag0035384
SyntenyLag0035384
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]5.4e-2352.17Show/hide
Query:  GPAGGGSSRKRKAIAREARFEPEYRGMYFVHLIKAHPPLEFIEAKAASIHQPHNDALVVTLMVANVKIHRILIDGGSSNDVLSLTAFKEMQLERDFLKSS
        GP    S RKRKA  REAR       +Y  ++      +EF E +A  +  PHNDALV+TL +AN K+HRIL+DGGSS D+ SLTA+K M L  + LKSS
Subjt:  GPAGGGSSRKRKAIAREARFEPEYRGMYFVHLIKAHPPLEFIEAKAASIHQPHNDALVVTLMVANVKIHRILIDGGSSNDVLSLTAFKEMQLERDFLKSS

Query:  LTPLVAFGGERVTPE
        LTPL+ FGGER+ P+
Subjt:  LTPLVAFGGERVTPE

XP_022150028.1 uncharacterized protein LOC111018300 [Momordica charantia]1.2e-2247.83Show/hide
Query:  PRLTKDG-RDKEEPPRKIITISGGPAGGGSSRKRKAIAREARFEPEYRGMYFVHLIKAHPPLEFIEAKAASIHQPHNDALVVTLMVANVKIHRILIDGGS
        P+ T++G  D + P R+I TI GGP      RKRKA  RE R       +Y   + K    +EF E +A  +  PHND LV+TL +AN K+HRIL+DGGS
Subjt:  PRLTKDG-RDKEEPPRKIITISGGPAGGGSSRKRKAIAREARFEPEYRGMYFVHLIKAHPPLEFIEAKAASIHQPHNDALVVTLMVANVKIHRILIDGGS

Query:  SNDVLSLTAFKEMQLERDFLKSSLTPLVAFGGERVTPE
        S D++SLTA+K M L     KSS   LV F GERV PE
Subjt:  SNDVLSLTAFKEMQLERDFLKSSLTPLVAFGGERVTPE

XP_022158827.1 uncharacterized protein LOC111025291 [Momordica charantia]2.0e-2548.53Show/hide
Query:  RLTKDGRDKEEPPRKIITISGGPAGGGSSRKRKAIAREARFEPEYRGMYFVHLIKAHPPLEFIEAKAASIHQPHNDALVVTLMVANVKIHRILIDGGSSN
        + T++  + + P R+I TI GGP    S RKRKA  REA+       +Y  +++     +EF E +A  +  PHNDALV+TL +AN K+HRIL+DGGSS 
Subjt:  RLTKDGRDKEEPPRKIITISGGPAGGGSSRKRKAIAREARFEPEYRGMYFVHLIKAHPPLEFIEAKAASIHQPHNDALVVTLMVANVKIHRILIDGGSSN

Query:  DVLSLTAFKEMQLERDFLKSSLTPLVAFGGERVTPE
        D++S TA+K M L    LKSSL PLV FGGERV P+
Subjt:  DVLSLTAFKEMQLERDFLKSSLTPLVAFGGERVTPE

XP_022158828.1 uncharacterized protein LOC111025292 [Momordica charantia]2.0e-2548.53Show/hide
Query:  RLTKDGRDKEEPPRKIITISGGPAGGGSSRKRKAIAREARFEPEYRGMYFVHLIKAHPPLEFIEAKAASIHQPHNDALVVTLMVANVKIHRILIDGGSSN
        + T++  + + P R+I TI GGP    S RKRKA  REA+       +Y  +++     +EF E +A  +  PHNDALV+TL +AN K+HRIL+DGGSS 
Subjt:  RLTKDGRDKEEPPRKIITISGGPAGGGSSRKRKAIAREARFEPEYRGMYFVHLIKAHPPLEFIEAKAASIHQPHNDALVVTLMVANVKIHRILIDGGSSN

Query:  DVLSLTAFKEMQLERDFLKSSLTPLVAFGGERVTPE
        D++S TA+K M L    LKSSL PLV FGGERV P+
Subjt:  DVLSLTAFKEMQLERDFLKSSLTPLVAFGGERVTPE

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.3e-2639.8Show/hide
Query:  MMEIRNTGLLKFPRRMKSNLDRREK----------------------SLSSSPKLG--------PRLTKDGRDKEEPPRKIITISGGPAGGGSSRKRKAI
        +MEI++  LLK+P RMK++  +R K                       +    + G        P+ T++G   + P R+I TI GGP    S RKRKA 
Subjt:  MMEIRNTGLLKFPRRMKSNLDRREK----------------------SLSSSPKLG--------PRLTKDGRDKEEPPRKIITISGGPAGGGSSRKRKAI

Query:  AREARFEPEYRGMYFVHLIKAHPPLEFIEAKAASIHQPHNDALVVTLMVANVKIHRILIDGGSSNDVLSLTAFKEMQLERDFLKSSLTPLVAFGGERVTP
         REAR   E   +Y  +       +EF E +A  +  PHNDALV+ L +ANVK+HR+L+DGGSS D++S TA+K M L    LK S  PLV FG ERV P
Subjt:  AREARFEPEYRGMYFVHLIKAHPPLEFIEAKAASIHQPHNDALVVTLMVANVKIHRILIDGGSSNDVLSLTAFKEMQLERDFLKSSLTPLVAFGGERVTP

Query:  E
        E
Subjt:  E

TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159012.6e-2352.17Show/hide
Query:  GPAGGGSSRKRKAIAREARFEPEYRGMYFVHLIKAHPPLEFIEAKAASIHQPHNDALVVTLMVANVKIHRILIDGGSSNDVLSLTAFKEMQLERDFLKSS
        GP    S RKRKA  REAR       +Y  ++      +EF E +A  +  PHNDALV+TL +AN K+HRIL+DGGSS D+ SLTA+K M L  + LKSS
Subjt:  GPAGGGSSRKRKAIAREARFEPEYRGMYFVHLIKAHPPLEFIEAKAASIHQPHNDALVVTLMVANVKIHRILIDGGSSNDVLSLTAFKEMQLERDFLKSS

Query:  LTPLVAFGGERVTPE
        LTPL+ FGGER+ P+
Subjt:  LTPLVAFGGERVTPE

A0A6J1D8C9 uncharacterized protein LOC1110183005.8e-2347.83Show/hide
Query:  PRLTKDG-RDKEEPPRKIITISGGPAGGGSSRKRKAIAREARFEPEYRGMYFVHLIKAHPPLEFIEAKAASIHQPHNDALVVTLMVANVKIHRILIDGGS
        P+ T++G  D + P R+I TI GGP      RKRKA  RE R       +Y   + K    +EF E +A  +  PHND LV+TL +AN K+HRIL+DGGS
Subjt:  PRLTKDG-RDKEEPPRKIITISGGPAGGGSSRKRKAIAREARFEPEYRGMYFVHLIKAHPPLEFIEAKAASIHQPHNDALVVTLMVANVKIHRILIDGGS

Query:  SNDVLSLTAFKEMQLERDFLKSSLTPLVAFGGERVTPE
        S D++SLTA+K M L     KSS   LV F GERV PE
Subjt:  SNDVLSLTAFKEMQLERDFLKSSLTPLVAFGGERVTPE

A0A6J1DWY0 uncharacterized protein LOC1110252938.7e-2740.3Show/hide
Query:  MMEIRNTGLLKFPRRMKSNLDRREK----------------------SLSSSPKLG--------PRLTKDGRDKEEPPRKIITISGGPAGGGSSRKRKAI
        +MEI++  LLK+P RMK++  +R K                       +    + G        P+ T++G   + P R+I TI GGP    S RKRKA 
Subjt:  MMEIRNTGLLKFPRRMKSNLDRREK----------------------SLSSSPKLG--------PRLTKDGRDKEEPPRKIITISGGPAGGGSSRKRKAI

Query:  AREARFEPEYRGMYFVHLIKAHPPLEFIEAKAASIHQPHNDALVVTLMVANVKIHRILIDGGSSNDVLSLTAFKEMQLERDFLKSSLTPLVAFGGERVTP
         REAR   E   +Y  +       +EF E +A  +  PHNDALV+ L +ANVK+HR+L+DGGSS D+LS TA+K M L    LK S  PLV FG ERV P
Subjt:  AREARFEPEYRGMYFVHLIKAHPPLEFIEAKAASIHQPHNDALVVTLMVANVKIHRILIDGGSSNDVLSLTAFKEMQLERDFLKSSLTPLVAFGGERVTP

Query:  E
        E
Subjt:  E

A0A6J1DX67 uncharacterized protein LOC1110252929.6e-2648.53Show/hide
Query:  RLTKDGRDKEEPPRKIITISGGPAGGGSSRKRKAIAREARFEPEYRGMYFVHLIKAHPPLEFIEAKAASIHQPHNDALVVTLMVANVKIHRILIDGGSSN
        + T++  + + P R+I TI GGP    S RKRKA  REA+       +Y  +++     +EF E +A  +  PHNDALV+TL +AN K+HRIL+DGGSS 
Subjt:  RLTKDGRDKEEPPRKIITISGGPAGGGSSRKRKAIAREARFEPEYRGMYFVHLIKAHPPLEFIEAKAASIHQPHNDALVVTLMVANVKIHRILIDGGSSN

Query:  DVLSLTAFKEMQLERDFLKSSLTPLVAFGGERVTPE
        D++S TA+K M L    LKSSL PLV FGGERV P+
Subjt:  DVLSLTAFKEMQLERDFLKSSLTPLVAFGGERVTPE

A0A6J1DY78 uncharacterized protein LOC1110252919.6e-2648.53Show/hide
Query:  RLTKDGRDKEEPPRKIITISGGPAGGGSSRKRKAIAREARFEPEYRGMYFVHLIKAHPPLEFIEAKAASIHQPHNDALVVTLMVANVKIHRILIDGGSSN
        + T++  + + P R+I TI GGP    S RKRKA  REA+       +Y  +++     +EF E +A  +  PHNDALV+TL +AN K+HRIL+DGGSS 
Subjt:  RLTKDGRDKEEPPRKIITISGGPAGGGSSRKRKAIAREARFEPEYRGMYFVHLIKAHPPLEFIEAKAASIHQPHNDALVVTLMVANVKIHRILIDGGSSN

Query:  DVLSLTAFKEMQLERDFLKSSLTPLVAFGGERVTPE
        D++S TA+K M L    LKSSL PLV FGGERV P+
Subjt:  DVLSLTAFKEMQLERDFLKSSLTPLVAFGGERVTPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAGATTCGAAACACGGGTCTTCTTAAATTTCCTAGGAGGATGAAGTCAAATCTCGACAGAAGAGAAAAGAGCCTGAGTTCGTCGCCAAAACTAGGGCCAAGGCT
GACCAAAGATGGTCGAGACAAAGAAGAACCCCCACGAAAGATCATAACCATCTCTGGAGGACCAGCTGGAGGAGGTTCAAGTAGGAAAAGGAAAGCTATCGCCAGAGAAG
CAAGGTTCGAACCAGAATATCGAGGTATGTACTTTGTCCATCTAATAAAGGCACACCCCCCTTTGGAGTTCATTGAGGCTAAGGCAGCAAGTATTCATCAGCCACATAAT
GATGCTCTGGTGGTCACTCTAATGGTGGCCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAGCTCGAATGATGTCCTCTCTCTAACAGCCTTTAAAGAAATGCA
GTTAGAGAGAGATTTTTTAAAGTCAAGCCTTACACCACTTGTAGCGTTTGGAGGAGAAAGAGTGACCCCAGAAGTTGCTGAAGTTTCCAACTCAGAATGGTGTGGGTGTT
GTCAAAGAGAGCAGAAGGCATCAAGAGAGTGTTACTGGACAACGCTGAAAGAAGTTAAACCGATGAGGGCTGAGGCCAACAAGAGAATGAACCGAGGCCAAGCAGGGCAC
ACTTCCACTAACAATGAATCTGAACTTATGGAGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGAGATTCGAAACACGGGTCTTCTTAAATTTCCTAGGAGGATGAAGTCAAATCTCGACAGAAGAGAAAAGAGCCTGAGTTCGTCGCCAAAACTAGGGCCAAGGCT
GACCAAAGATGGTCGAGACAAAGAAGAACCCCCACGAAAGATCATAACCATCTCTGGAGGACCAGCTGGAGGAGGTTCAAGTAGGAAAAGGAAAGCTATCGCCAGAGAAG
CAAGGTTCGAACCAGAATATCGAGGTATGTACTTTGTCCATCTAATAAAGGCACACCCCCCTTTGGAGTTCATTGAGGCTAAGGCAGCAAGTATTCATCAGCCACATAAT
GATGCTCTGGTGGTCACTCTAATGGTGGCCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAGCTCGAATGATGTCCTCTCTCTAACAGCCTTTAAAGAAATGCA
GTTAGAGAGAGATTTTTTAAAGTCAAGCCTTACACCACTTGTAGCGTTTGGAGGAGAAAGAGTGACCCCAGAAGTTGCTGAAGTTTCCAACTCAGAATGGTGTGGGTGTT
GTCAAAGAGAGCAGAAGGCATCAAGAGAGTGTTACTGGACAACGCTGAAAGAAGTTAAACCGATGAGGGCTGAGGCCAACAAGAGAATGAACCGAGGCCAAGCAGGGCAC
ACTTCCACTAACAATGAATCTGAACTTATGGAGTTTTAG
Protein sequenceShow/hide protein sequence
MMEIRNTGLLKFPRRMKSNLDRREKSLSSSPKLGPRLTKDGRDKEEPPRKIITISGGPAGGGSSRKRKAIAREARFEPEYRGMYFVHLIKAHPPLEFIEAKAASIHQPHN
DALVVTLMVANVKIHRILIDGGSSNDVLSLTAFKEMQLERDFLKSSLTPLVAFGGERVTPEVAEVSNSEWCGCCQREQKASRECYWTTLKEVKPMRAEANKRMNRGQAGH
TSTNNESELMEF