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Lag0035396 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035396
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:20865849..20866328
RNA-Seq ExpressionLag0035396
SyntenyLag0035396
Gene Ontology termsGO:0050789 - regulation of biological process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN72837.1 hypothetical protein VITISV_031500 [Vitis vinifera]3.5e-0538.96Show/hide
Query:  DSTGWPGHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELVTIDTKEDSGHLTEHDYSRRSEIKAELMILSLAQ
        +  GW GH F++KL+ +K +LK WN++ FG  KE+K  +S E+  ID  E  G L+    ++R+  K EL  L L +
Subjt:  DSTGWPGHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELVTIDTKEDSGHLTEHDYSRRSEIKAELMILSLAQ

GFS28866.1 hypothetical protein Acr_00g0004350 [Actinidia rufa]5.3e-0640Show/hide
Query:  DSTGWPGHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELVTIDTKEDSGHLTEHDYSRRSEIKAEL
        D  GW G+  ++KLK +K  LK WN+  FGN + Q  ++ ++L  +D K + G + E+D  RR E+KA+L
Subjt:  DSTGWPGHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELVTIDTKEDSGHLTEHDYSRRSEIKAEL

RVW30895.1 hypothetical protein CK203_102803 [Vitis vinifera]4.5e-0538.96Show/hide
Query:  DSTGWPGHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELVTIDTKEDSGHLTEHDYSRRSEIKAELMILSLAQ
        +  GW GH F++KL+ +K +LK WN++ FG  KE+K  +S E+  ID  E  G L+    ++R+  K EL  L L +
Subjt:  DSTGWPGHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELVTIDTKEDSGHLTEHDYSRRSEIKAELMILSLAQ

RVW99725.1 DNA repair protein RAD50 [Vitis vinifera]3.5e-0538.96Show/hide
Query:  DSTGWPGHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELVTIDTKEDSGHLTEHDYSRRSEIKAELMILSLAQ
        +  GW GH F++KL+ +K +LK WN++ FG  KE+K  +S E+  ID  E  G L+    ++R+  K EL  L L +
Subjt:  DSTGWPGHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELVTIDTKEDSGHLTEHDYSRRSEIKAELMILSLAQ

RVX19336.1 putative mitochondrial protein [Vitis vinifera]1.6e-0540.26Show/hide
Query:  DSTGWPGHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELVTIDTKEDSGHLTEHDYSRRSEIKAELMILSLAQ
        D  GW GH F++KL+ +K +LK WN++ FG  KE+K  +  E+  ID  E  G L+ +  ++R E K EL  L L +
Subjt:  DSTGWPGHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELVTIDTKEDSGHLTEHDYSRRSEIKAELMILSLAQ

TrEMBL top hitse value%identityAlignment
A0A438D5Y0 Endo/exonuclease/phosphatase domain-containing protein2.2e-0538.96Show/hide
Query:  DSTGWPGHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELVTIDTKEDSGHLTEHDYSRRSEIKAELMILSLAQ
        +  GW GH F++KL+ +K +LK WN++ FG  KE+K  +S E+  ID  E  G L+    ++R+  K EL  L L +
Subjt:  DSTGWPGHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELVTIDTKEDSGHLTEHDYSRRSEIKAELMILSLAQ

A0A438ISX9 DNA repair protein RAD501.7e-0538.96Show/hide
Query:  DSTGWPGHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELVTIDTKEDSGHLTEHDYSRRSEIKAELMILSLAQ
        +  GW GH F++KL+ +K +LK WN++ FG  KE+K  +S E+  ID  E  G L+    ++R+  K EL  L L +
Subjt:  DSTGWPGHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELVTIDTKEDSGHLTEHDYSRRSEIKAELMILSLAQ

A0A438KDP4 Putative mitochondrial protein7.5e-0640.26Show/hide
Query:  DSTGWPGHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELVTIDTKEDSGHLTEHDYSRRSEIKAELMILSLAQ
        D  GW GH F++KL+ +K +LK WN++ FG  KE+K  +  E+  ID  E  G L+ +  ++R E K EL  L L +
Subjt:  DSTGWPGHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELVTIDTKEDSGHLTEHDYSRRSEIKAELMILSLAQ

A0A7J0D929 Reverse transcriptase domain-containing protein2.6e-0640Show/hide
Query:  DSTGWPGHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELVTIDTKEDSGHLTEHDYSRRSEIKAEL
        D  GW G+  ++KLK +K  LK WN+  FGN + Q  ++ ++L  +D K + G + E+D  RR E+KA+L
Subjt:  DSTGWPGHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELVTIDTKEDSGHLTEHDYSRRSEIKAEL

A5BYB2 Reverse transcriptase domain-containing protein1.7e-0538.96Show/hide
Query:  DSTGWPGHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELVTIDTKEDSGHLTEHDYSRRSEIKAELMILSLAQ
        +  GW GH F++KL+ +K +LK WN++ FG  KE+K  +S E+  ID  E  G L+    ++R+  K EL  L L +
Subjt:  DSTGWPGHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELVTIDTKEDSGHLTEHDYSRRSEIKAELMILSLAQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGTGGAAGACCTCCATGATTCAACCGGTTGGCCCGGCCACGGGTTCATTCAAAAGCTTAAGGGGCTGAAAATGGAGCTGAAACACTGGAACCAATCTGTCTTTGG
TAATCAAAAAGAACAAAAGGCCAAGCTTAGCCAAGAACTCGTGACTATTGATACAAAAGAGGATAGTGGCCATTTAACTGAACACGACTATAGCAGAAGATCTGAGATCA
AGGCTGAATTGATGATACTGTCCTTGGCCCAATTCACTCTAGCATTTTGTCTCCAACTAGTGGTTTCCTTCTTCACCAACTCCAACTTACAGGCCAAGTGCTCCTCCTTG
AGAACCTTATCCATCTACCCTTCCTCCTCCAAGGCATCAATAAAGCTTGCTCATAACCTCCTGTTTCTTGGTTTTGAAATCCCCAAAAACCTCCTTGTTCCACACTTTAA
AGCTCCTTTCAAAGCCCTTAACTTAACCATAAACCGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGTGGAAGACCTCCATGATTCAACCGGTTGGCCCGGCCACGGGTTCATTCAAAAGCTTAAGGGGCTGAAAATGGAGCTGAAACACTGGAACCAATCTGTCTTTGG
TAATCAAAAAGAACAAAAGGCCAAGCTTAGCCAAGAACTCGTGACTATTGATACAAAAGAGGATAGTGGCCATTTAACTGAACACGACTATAGCAGAAGATCTGAGATCA
AGGCTGAATTGATGATACTGTCCTTGGCCCAATTCACTCTAGCATTTTGTCTCCAACTAGTGGTTTCCTTCTTCACCAACTCCAACTTACAGGCCAAGTGCTCCTCCTTG
AGAACCTTATCCATCTACCCTTCCTCCTCCAAGGCATCAATAAAGCTTGCTCATAACCTCCTGTTTCTTGGTTTTGAAATCCCCAAAAACCTCCTTGTTCCACACTTTAA
AGCTCCTTTCAAAGCCCTTAACTTAACCATAAACCGGTAG
Protein sequenceShow/hide protein sequence
MMVEDLHDSTGWPGHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELVTIDTKEDSGHLTEHDYSRRSEIKAELMILSLAQFTLAFCLQLVVSFFTNSNLQAKCSSL
RTLSIYPSSSKASIKLAHNLLFLGFEIPKNLLVPHFKAPFKALNLTINR