; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035418 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035418
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr3:21209018..21209629
RNA-Seq ExpressionLag0035418
SyntenyLag0035418
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]1.0e-4146.34Show/hide
Query:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKNWMDFHGVLDAIRCRAFSFTLTGSAKHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINFLTVKQ
        MK +VP KFK+P  K YDG  DP+ HL+ Y  W D +G+ +AIRCR FSFTLTGS + WF++LKR+SIS FK+LARAF+ QF G   + +P    LT+KQ
Subjt:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKNWMDFHGVLDAIRCRAFSFTLTGSAKHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINFLTVKQ

Query:  QPGESLHDYIMCFNDEALQVEGYSEGAVLVAITAGLEDERLLNSIGKIQPRTYVEFVSKAQKYMSAEELLKSRRSEWEHKRHSSVDQDKKKDKR-----Q
        +  ESL DY+  FN E LQVEG ++  VL+   +G++DE+L+ S GK    T+ E  S+AQ YMS  EL+ S+R         +  + +  +KR     +
Subjt:  QPGESLHDYIMCFNDEALQVEGYSEGAVLVAITAGLEDERLLNSIGKIQPRTYVEFVSKAQKYMSAEELLKSRRSEWEHKRHSSVDQDKKKDKR-----Q

Query:  RTDDG
        R+D G
Subjt:  RTDDG

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]7.0e-4348.28Show/hide
Query:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKNWMDFHGVLDAIRCRAFSFTLTGSAKHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINFLTVKQ
        MK +VP KFK+PT K +DG  D V HL+AY+ WMD +GV +A++CR FS TL+GSA+ WF +LKR SIS FK LA+AF+ QF+G R + +P    LT+KQ
Subjt:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKNWMDFHGVLDAIRCRAFSFTLTGSAKHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINFLTVKQ

Query:  QPGESLHDYIMCFNDEALQVEGYSEGAVLVAITAGLEDERLLNSIGKIQPRTYVEFVSKAQKYMSAEELLKSRR------SEWEHKRHSSVDQDKKKDKR
        +  ESLHDY+  FN+E LQVEG +    L+A  + + DE L  S GK  P T+ E +S+AQKYMSA E   S+R      S+   +R     Q  + +KR
Subjt:  QPGESLHDYIMCFNDEALQVEGYSEGAVLVAITAGLEDERLLNSIGKIQPRTYVEFVSKAQKYMSAEELLKSRR------SEWEHKRHSSVDQDKKKDKR

Query:  QRT
         R+
Subjt:  QRT

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]1.5e-4548.22Show/hide
Query:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKNWMDFHGVLDAIRCRAFSFTLTGSAKHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINFLTVKQ
        MK +   KFK+P    YDG  DP+ HL+AY+ W D + + +AIRCR FSFTLTGSA++WF +LKR SIS FK+LA AF+ QF+G R + KP    LT+KQ
Subjt:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKNWMDFHGVLDAIRCRAFSFTLTGSAKHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINFLTVKQ

Query:  QPGESLHDYIMCFNDEALQVEGYSEGAVLVAITAGLEDERLLNSIGKIQPRTYVEFVSKAQKYMSAEELLKSRRSEWEHKRHSSVDQDKKKDKRQRT
        +  ESL +Y+  FN+E LQVEG ++   L+A  +G++DERL+ S GK  P T++E +S+AQKYMSA EL+   R     + + S  ++++ +KR R+
Subjt:  QPGESLHDYIMCFNDEALQVEGYSEGAVLVAITAGLEDERLLNSIGKIQPRTYVEFVSKAQKYMSAEELLKSRRSEWEHKRHSSVDQDKKKDKRQRT

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]7.0e-4349.26Show/hide
Query:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKNWMDFHGVLDAIRCRAFSFTLTGSAKHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINFLTVKQ
        M+ +VP KFK+PT K +D   DPV HL+AY+ WMD +GV +A+RCR FS TL GSA+ WF +LKR SIS FK LARAF+ QF+G R + +P    LT+KQ
Subjt:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKNWMDFHGVLDAIRCRAFSFTLTGSAKHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINFLTVKQ

Query:  QPGESLHDYIMCFNDEALQVEGYSEGAVLVAITAGLEDERLLNSIGKIQPRTYVEFVSKAQKYMSAEELLKSRR----SEWEHKRHSSVD--QDKKKDKR
        +  ESL DY+  FN+E LQVEG ++   L+A  +G+ DE L  S GK  P T+ E +S+AQ+YMSA E   S+R       + KR  S D  Q  + +KR
Subjt:  QPGESLHDYIMCFNDEALQVEGYSEGAVLVAITAGLEDERLLNSIGKIQPRTYVEFVSKAQKYMSAEELLKSRR----SEWEHKRHSSVD--QDKKKDKR

Query:  QRT
         R+
Subjt:  QRT

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]8.3e-4450Show/hide
Query:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKNWMDFHGVLDAIRCRAFSFTLTGSAKHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINFLTVKQ
        M+ +VP KFK+PT K +DG  +PV HL+AY+ WMD +GV DAIRCR FS TL GSA+ WF +LKR SIS FK LARAF+ QF+G R + +P    LT+KQ
Subjt:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKNWMDFHGVLDAIRCRAFSFTLTGSAKHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINFLTVKQ

Query:  QPGESLHDYIMCFNDEALQVEGYSEGAVLVAITAGLEDERLLNSIGKIQPRTYVEFVSKAQKYMSAEELLKSRR----SEWEHKRHSSVD--QDKKKDKR
        +  ESLHDY+  FN+E LQ+EG ++   L+A  +G+ DE L  S  K  P T+ E +S+AQ+YMSA E   S+R       + KR  S D  Q  + +KR
Subjt:  QPGESLHDYIMCFNDEALQVEGYSEGAVLVAITAGLEDERLLNSIGKIQPRTYVEFVSKAQKYMSAEELLKSRR----SEWEHKRHSSVD--QDKKKDKR

Query:  QR
         R
Subjt:  QR

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166194.9e-4246.34Show/hide
Query:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKNWMDFHGVLDAIRCRAFSFTLTGSAKHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINFLTVKQ
        MK +VP KFK+P  K YDG  DP+ HL+ Y  W D +G+ +AIRCR FSFTLTGS + WF++LKR+SIS FK+LARAF+ QF G   + +P    LT+KQ
Subjt:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKNWMDFHGVLDAIRCRAFSFTLTGSAKHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINFLTVKQ

Query:  QPGESLHDYIMCFNDEALQVEGYSEGAVLVAITAGLEDERLLNSIGKIQPRTYVEFVSKAQKYMSAEELLKSRRSEWEHKRHSSVDQDKKKDKR-----Q
        +  ESL DY+  FN E LQVEG ++  VL+   +G++DE+L+ S GK    T+ E  S+AQ YMS  EL+ S+R         +  + +  +KR     +
Subjt:  QPGESLHDYIMCFNDEALQVEGYSEGAVLVAITAGLEDERLLNSIGKIQPRTYVEFVSKAQKYMSAEELLKSRRSEWEHKRHSSVDQDKKKDKR-----Q

Query:  RTDDG
        R+D G
Subjt:  RTDDG

A0A6J1D7D2 uncharacterized protein LOC1110183073.4e-4348.28Show/hide
Query:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKNWMDFHGVLDAIRCRAFSFTLTGSAKHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINFLTVKQ
        MK +VP KFK+PT K +DG  D V HL+AY+ WMD +GV +A++CR FS TL+GSA+ WF +LKR SIS FK LA+AF+ QF+G R + +P    LT+KQ
Subjt:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKNWMDFHGVLDAIRCRAFSFTLTGSAKHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINFLTVKQ

Query:  QPGESLHDYIMCFNDEALQVEGYSEGAVLVAITAGLEDERLLNSIGKIQPRTYVEFVSKAQKYMSAEELLKSRR------SEWEHKRHSSVDQDKKKDKR
        +  ESLHDY+  FN+E LQVEG +    L+A  + + DE L  S GK  P T+ E +S+AQKYMSA E   S+R      S+   +R     Q  + +KR
Subjt:  QPGESLHDYIMCFNDEALQVEGYSEGAVLVAITAGLEDERLLNSIGKIQPRTYVEFVSKAQKYMSAEELLKSRR------SEWEHKRHSSVDQDKKKDKR

Query:  QRT
         R+
Subjt:  QRT

A0A6J1DWY0 uncharacterized protein LOC1110252933.4e-4349.26Show/hide
Query:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKNWMDFHGVLDAIRCRAFSFTLTGSAKHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINFLTVKQ
        M+ +VP KFK+PT K +D   DPV HL+AY+ WMD +GV +A+RCR FS TL GSA+ WF +LKR SIS FK LARAF+ QF+G R + +P    LT+KQ
Subjt:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKNWMDFHGVLDAIRCRAFSFTLTGSAKHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINFLTVKQ

Query:  QPGESLHDYIMCFNDEALQVEGYSEGAVLVAITAGLEDERLLNSIGKIQPRTYVEFVSKAQKYMSAEELLKSRR----SEWEHKRHSSVD--QDKKKDKR
        +  ESL DY+  FN+E LQVEG ++   L+A  +G+ DE L  S GK  P T+ E +S+AQ+YMSA E   S+R       + KR  S D  Q  + +KR
Subjt:  QPGESLHDYIMCFNDEALQVEGYSEGAVLVAITAGLEDERLLNSIGKIQPRTYVEFVSKAQKYMSAEELLKSRR----SEWEHKRHSSVD--QDKKKDKR

Query:  QRT
         R+
Subjt:  QRT

A0A6J1DZ49 uncharacterized protein LOC1110248517.3e-4648.22Show/hide
Query:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKNWMDFHGVLDAIRCRAFSFTLTGSAKHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINFLTVKQ
        MK +   KFK+P    YDG  DP+ HL+AY+ W D + + +AIRCR FSFTLTGSA++WF +LKR SIS FK+LA AF+ QF+G R + KP    LT+KQ
Subjt:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKNWMDFHGVLDAIRCRAFSFTLTGSAKHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINFLTVKQ

Query:  QPGESLHDYIMCFNDEALQVEGYSEGAVLVAITAGLEDERLLNSIGKIQPRTYVEFVSKAQKYMSAEELLKSRRSEWEHKRHSSVDQDKKKDKRQRT
        +  ESL +Y+  FN+E LQVEG ++   L+A  +G++DERL+ S GK  P T++E +S+AQKYMSA EL+   R     + + S  ++++ +KR R+
Subjt:  QPGESLHDYIMCFNDEALQVEGYSEGAVLVAITAGLEDERLLNSIGKIQPRTYVEFVSKAQKYMSAEELLKSRRSEWEHKRHSSVDQDKKKDKRQRT

A0A6J1E1E7 uncharacterized protein LOC1110255484.0e-4450Show/hide
Query:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKNWMDFHGVLDAIRCRAFSFTLTGSAKHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINFLTVKQ
        M+ +VP KFK+PT K +DG  +PV HL+AY+ WMD +GV DAIRCR FS TL GSA+ WF +LKR SIS FK LARAF+ QF+G R + +P    LT+KQ
Subjt:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKNWMDFHGVLDAIRCRAFSFTLTGSAKHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINFLTVKQ

Query:  QPGESLHDYIMCFNDEALQVEGYSEGAVLVAITAGLEDERLLNSIGKIQPRTYVEFVSKAQKYMSAEELLKSRR----SEWEHKRHSSVD--QDKKKDKR
        +  ESLHDY+  FN+E LQ+EG ++   L+A  +G+ DE L  S  K  P T+ E +S+AQ+YMSA E   S+R       + KR  S D  Q  + +KR
Subjt:  QPGESLHDYIMCFNDEALQVEGYSEGAVLVAITAGLEDERLLNSIGKIQPRTYVEFVSKAQKYMSAEELLKSRR----SEWEHKRHSSVD--QDKKKDKR

Query:  QR
         R
Subjt:  QR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCTGAGGTGCCCCAGAAGTTCAAGGTACCTACATTCAAGTCATATGATGGCAAGAAAGACCCCGTGCAACATCTAAACGCCTACAAAAACTGGATGGAC
TTCCACGGTGTCTTAGACGCAATCAGGTGTCGCGCATTCTCTTTCACTCTAACAGGATCAGCCAAGCATTGGTTTGAAAGGTTGAAAAGGAGATCCATCAGCTGT
TTCAAGGATTTAGCCCGAGCATTCCTTGCACAGTTCATGGGAGCTAGAGAACAGCGTAAGCCTCACATCAACTTCTTGACAGTCAAACAGCAGCCAGGTGAGAGC
TTGCATGATTATATAATGTGTTTCAACGACGAAGCACTGCAGGTTGAAGGATACAGTGAGGGAGCAGTCCTAGTAGCCATCACAGCCGGACTTGAGGATGAGAGA
CTGCTCAATTCAATAGGTAAGATCCAACCTCGAACTTATGTCGAGTTTGTTTCCAAGGCACAGAAGTATATGAGCGCAGAGGAGTTACTGAAATCAAGGAGGTCA
GAATGGGAGCACAAAAGACATTCTTCAGTCGATCAGGACAAAAAAAAAGATAAGAGACAGCGGACAGACGATGGTGGTCGAGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCTGAGGTGCCCCAGAAGTTCAAGGTACCTACATTCAAGTCATATGATGGCAAGAAAGACCCCGTGCAACATCTAAACGCCTACAAAAACTGGATGGAC
TTCCACGGTGTCTTAGACGCAATCAGGTGTCGCGCATTCTCTTTCACTCTAACAGGATCAGCCAAGCATTGGTTTGAAAGGTTGAAAAGGAGATCCATCAGCTGT
TTCAAGGATTTAGCCCGAGCATTCCTTGCACAGTTCATGGGAGCTAGAGAACAGCGTAAGCCTCACATCAACTTCTTGACAGTCAAACAGCAGCCAGGTGAGAGC
TTGCATGATTATATAATGTGTTTCAACGACGAAGCACTGCAGGTTGAAGGATACAGTGAGGGAGCAGTCCTAGTAGCCATCACAGCCGGACTTGAGGATGAGAGA
CTGCTCAATTCAATAGGTAAGATCCAACCTCGAACTTATGTCGAGTTTGTTTCCAAGGCACAGAAGTATATGAGCGCAGAGGAGTTACTGAAATCAAGGAGGTCA
GAATGGGAGCACAAAAGACATTCTTCAGTCGATCAGGACAAAAAAAAAGATAAGAGACAGCGGACAGACGATGGTGGTCGAGACTGA
Protein sequenceShow/hide protein sequence
MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKNWMDFHGVLDAIRCRAFSFTLTGSAKHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINFLTVKQQPGES
LHDYIMCFNDEALQVEGYSEGAVLVAITAGLEDERLLNSIGKIQPRTYVEFVSKAQKYMSAEELLKSRRSEWEHKRHSSVDQDKKKDKRQRTDDGGRD