; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035425 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035425
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr3:21287269..21288502
RNA-Seq ExpressionLag0035425
SyntenyLag0035425
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK05005.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]7.5e-8847.96Show/hide
Query:  MHWGLLYILQGIKPRTFEELATRAHDMELSIASRGNKDLVVPDTRKEKKEVKGIEKVTKSATKESMVINTTPLNF-------------------------
        MHWGLLYILQGIKPRTFEELATRAHDMELSIASRG KD  VP+ +K+KKE    EKV KS+ KESMV+NT PL F                         
Subjt:  MHWGLLYILQGIKPRTFEELATRAHDMELSIASRGNKDLVVPDTRKEKKEVKGIEKVTKSATKESMVINTTPLNF-------------------------

Query:  ---------SDVPDILEQLLEKQLIELPNCKRLKELGKVNDPNYCKGSNF-------------LISSCDYDEK----LIQFGTLDPVVVRFQKEATMKGS
                 SD  D+LEQLLEKQLI+LP CKR ++ G V+DPNYCK                 LI     ++K    L +FGT +PVVVRF +E   + S
Subjt:  ---------SDVPDILEQLLEKQLIELPNCKRLKELGKVNDPNYCKGSNF-------------LISSCDYDEK----LIQFGTLDPVVVRFQKEATMKGS

Query:  QEKYDSIEDENEGWTLVVRLKKQKQSYAWKESRLFRDSKRKVKSQRKKGKKKTKRSKPVVEESEDLFCPPQPITLAEYFPRRFLDGSQRDAHETVTSHIV
        QEK   IE+++E WT+V R KK+K +   KE R +R+ +R  K+Q+ K KKKT++ K + +E +D     + ITLA++FP RFL   Q +    V  H +
Subjt:  QEKYDSIEDENEGWTLVVRLKKQKQSYAWKESRLFRDSKRKVKSQRKKGKKKTKRSKPVVEESEDLFCPPQPITLAEYFPRRFLDGSQRDAHETVTSHIV

Query:  DVVEDDDVATSSSRTVAGPRDLSSFCIQDLLSLPQKAKSVLIDALMESDVT----NIPTFEARTGASCCMSIRFSDEDLLLGSKLHNRPLFVSSYIREQR
        +  E++ +   S       +DLS F + DLLSLPQ+ K++LI+AL+ S  +    +  T+E+      CMSI FS++DLLLGSKLHNRPL+VS Y+REQR
Subjt:  DVVEDDDVATSSSRTVAGPRDLSSFCIQDLLSLPQKAKSVLIDALMESDVT----NIPTFEARTGASCCMSIRFSDEDLLLGSKLHNRPLFVSSYIREQR

Query:  VSRILIDDGSAVNIMPK
        V RIL+D+GSAVNIMPK
Subjt:  VSRILIDDGSAVNIMPK

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]1.5e-8845.17Show/hide
Query:  MHWGLLYILQGIKPRTFEELATRAHDMELSIASRGNKDLVVPDTRKEKKEVKGIEKVTKSATKESMVINTTPLNF-------------------------
        MHWGLLYILQGIKPRTFEELATRAHDMELSIASRG KD +VP+ +K+KKE+KG EK+ KS +KESMV+NTTPL F                         
Subjt:  MHWGLLYILQGIKPRTFEELATRAHDMELSIASRGNKDLVVPDTRKEKKEVKGIEKVTKSATKESMVINTTPLNF-------------------------

Query:  ---------SDVPDILEQLLEKQLIELPNCKRLKELGKVNDPNYCKGSNFL---ISSC------------------DYDE--------------------
                 SD+ D+LEQLLEKQLI+LP CKR ++ GKV+DPNYCK    +   +  C                  D +E                    
Subjt:  ---------SDVPDILEQLLEKQLIELPNCKRLKELGKVNDPNYCKGSNFL---ISSC------------------DYDE--------------------

Query:  ------KLIQFGTLDPVVVRFQKEATMKGSQEKYDSIEDENEGWTLVVRLKKQKQSYAWKESRLFRDSKRKVKSQRKKGKKKTKRSKPVVEESEDLFCPP
               L+QFGT +P+VV+F +E + +  Q +   IE+++EGW +V   KK++     +ESR +++ +R  K+Q+ K KKKT + K V  E  +   P 
Subjt:  ------KLIQFGTLDPVVVRFQKEATMKGSQEKYDSIEDENEGWTLVVRLKKQKQSYAWKESRLFRDSKRKVKSQRKKGKKKTKRSKPVVEESEDLFCPP

Query:  QPITLAEYFPRRFLDGSQRDAHETVTSHIVDVVEDDDVATSSSRTVAGPRDLSSFCIQDLLSLPQKAKSVLIDALMES--DVTNIPTFEARTGASCCMSI
        + +TLA++ P+ FL   Q +  E V  H ++  E++ +   S       +DLS F ++DLLSLPQ+ K++LIDAL+ S    ++ PT    +G S CMSI
Subjt:  QPITLAEYFPRRFLDGSQRDAHETVTSHIVDVVEDDDVATSSSRTVAGPRDLSSFCIQDLLSLPQKAKSVLIDALMES--DVTNIPTFEARTGASCCMSI

Query:  RFSDEDLLLGSKLHNRPLFVSSYIREQRVSRILIDDGSAVNIMPK
         FSDEDLLLGSKLHNRPL+VS Y+REQRV RILID+GSAVNIMPK
Subjt:  RFSDEDLLLGSKLHNRPLFVSSYIREQRVSRILIDDGSAVNIMPK

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]2.0e-8845.17Show/hide
Query:  MHWGLLYILQGIKPRTFEELATRAHDMELSIASRGNKDLVVPDTRKEKKEVKGIEKVTKSATKESMVINTTPLNF-------------------------
        MHWGLLYILQGIKPRTFEELATRAHDMELSIASRG KD +VP+ +K+KKE+KG EK+ KS  KESMV+NTTPL F                         
Subjt:  MHWGLLYILQGIKPRTFEELATRAHDMELSIASRGNKDLVVPDTRKEKKEVKGIEKVTKSATKESMVINTTPLNF-------------------------

Query:  ---------SDVPDILEQLLEKQLIELPNCKRLKELGKVNDPNYCKGSNFL---ISSC------------------DYDE--------------------
                 SD+ D+LEQLLEKQLI+LP CKR ++ GKV+DPNYCK    +   +  C                  D +E                    
Subjt:  ---------SDVPDILEQLLEKQLIELPNCKRLKELGKVNDPNYCKGSNFL---ISSC------------------DYDE--------------------

Query:  ------KLIQFGTLDPVVVRFQKEATMKGSQEKYDSIEDENEGWTLVVRLKKQKQSYAWKESRLFRDSKRKVKSQRKKGKKKTKRSKPVVEESEDLFCPP
               L+QFGT +P+VV+F +E + +  Q +   IE+++EGW +V   KK++     +ESR +++ +R  K+Q+ K KKKT + K V  E  +   P 
Subjt:  ------KLIQFGTLDPVVVRFQKEATMKGSQEKYDSIEDENEGWTLVVRLKKQKQSYAWKESRLFRDSKRKVKSQRKKGKKKTKRSKPVVEESEDLFCPP

Query:  QPITLAEYFPRRFLDGSQRDAHETVTSHIVDVVEDDDVATSSSRTVAGPRDLSSFCIQDLLSLPQKAKSVLIDALMES--DVTNIPTFEARTGASCCMSI
        + +TLA++ P+ FL   Q +  E V  H ++  E++ +   S       +DLS F ++DLLSLPQ+ K++LIDAL+ S    ++ PT    +G S CMSI
Subjt:  QPITLAEYFPRRFLDGSQRDAHETVTSHIVDVVEDDDVATSSSRTVAGPRDLSSFCIQDLLSLPQKAKSVLIDALMES--DVTNIPTFEARTGASCCMSI

Query:  RFSDEDLLLGSKLHNRPLFVSSYIREQRVSRILIDDGSAVNIMPK
         FSDEDLLLGSKLHNRPL+VS Y+REQRV RILID+GSAVNIMPK
Subjt:  RFSDEDLLLGSKLHNRPLFVSSYIREQRVSRILIDDGSAVNIMPK

XP_031740568.1 uncharacterized protein LOC116403508 [Cucumis sativus]1.5e-8845.17Show/hide
Query:  MHWGLLYILQGIKPRTFEELATRAHDMELSIASRGNKDLVVPDTRKEKKEVKGIEKVTKSATKESMVINTTPLNF-------------------------
        MHWGLLYILQGIKPRTFEELATRAHDMELSIASRG KD +VP+ +K+KKE+KG EK+ KS +KESMV+NTTPL F                         
Subjt:  MHWGLLYILQGIKPRTFEELATRAHDMELSIASRGNKDLVVPDTRKEKKEVKGIEKVTKSATKESMVINTTPLNF-------------------------

Query:  ---------SDVPDILEQLLEKQLIELPNCKRLKELGKVNDPNYCKGSNFL---ISSC------------------DYDE--------------------
                 SD+ D+LEQLLEKQLI+LP CKR ++ GKV+DPNYCK    +   +  C                  D +E                    
Subjt:  ---------SDVPDILEQLLEKQLIELPNCKRLKELGKVNDPNYCKGSNFL---ISSC------------------DYDE--------------------

Query:  ------KLIQFGTLDPVVVRFQKEATMKGSQEKYDSIEDENEGWTLVVRLKKQKQSYAWKESRLFRDSKRKVKSQRKKGKKKTKRSKPVVEESEDLFCPP
               L+QFGT +P+VV+F +E + +  Q +   IE+++EGW +V   KK++     +ESR +++ +R  K+Q+ K KKKT + K V  E  +   P 
Subjt:  ------KLIQFGTLDPVVVRFQKEATMKGSQEKYDSIEDENEGWTLVVRLKKQKQSYAWKESRLFRDSKRKVKSQRKKGKKKTKRSKPVVEESEDLFCPP

Query:  QPITLAEYFPRRFLDGSQRDAHETVTSHIVDVVEDDDVATSSSRTVAGPRDLSSFCIQDLLSLPQKAKSVLIDALMES--DVTNIPTFEARTGASCCMSI
        + +TLA++ P+ FL   Q +  E V  H ++  E++ +   S       +DLS F ++DLLSLPQ+ K++LIDAL+ S    ++ PT    +G S CMSI
Subjt:  QPITLAEYFPRRFLDGSQRDAHETVTSHIVDVVEDDDVATSSSRTVAGPRDLSSFCIQDLLSLPQKAKSVLIDALMES--DVTNIPTFEARTGASCCMSI

Query:  RFSDEDLLLGSKLHNRPLFVSSYIREQRVSRILIDDGSAVNIMPK
         FSDEDLLLGSKLHNRPL+VS Y+REQRV RILID+GSAVNIMPK
Subjt:  RFSDEDLLLGSKLHNRPLFVSSYIREQRVSRILIDDGSAVNIMPK

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]2.6e-8845.17Show/hide
Query:  MHWGLLYILQGIKPRTFEELATRAHDMELSIASRGNKDLVVPDTRKEKKEVKGIEKVTKSATKESMVINTTPLNF-------------------------
        MHWGLLYILQGIKPRTFEELATRAHDMELSIASRG KD +VP+ +K+KKE+KG EK+ KS  KESMV+NTTPL F                         
Subjt:  MHWGLLYILQGIKPRTFEELATRAHDMELSIASRGNKDLVVPDTRKEKKEVKGIEKVTKSATKESMVINTTPLNF-------------------------

Query:  ---------SDVPDILEQLLEKQLIELPNCKRLKELGKVNDPNYCKGSNFL---ISSC------------------DYDE--------------------
                 SD+ D+LEQLLEKQLI+LP CKR ++ GKV+DPNYCK    +   +  C                  D +E                    
Subjt:  ---------SDVPDILEQLLEKQLIELPNCKRLKELGKVNDPNYCKGSNFL---ISSC------------------DYDE--------------------

Query:  ------KLIQFGTLDPVVVRFQKEATMKGSQEKYDSIEDENEGWTLVVRLKKQKQSYAWKESRLFRDSKRKVKSQRKKGKKKTKRSKPVVEESEDLFCPP
               L+QFGT +P+VV+F +E + +  Q +   IE+++EGW +V   KK++     +ESR +++ +R  K+Q+ K KKKT + K V  E  +   P 
Subjt:  ------KLIQFGTLDPVVVRFQKEATMKGSQEKYDSIEDENEGWTLVVRLKKQKQSYAWKESRLFRDSKRKVKSQRKKGKKKTKRSKPVVEESEDLFCPP

Query:  QPITLAEYFPRRFLDGSQRDAHETVTSHIVDVVEDDDVATSSSRTVAGPRDLSSFCIQDLLSLPQKAKSVLIDALMES--DVTNIPTFEARTGASCCMSI
        + +TLA++ P+ FL   Q +  E V  H ++  E++ +   S       +DLS F ++DLLSLPQ+ K++LIDAL+ S    ++ PT    +G S CMSI
Subjt:  QPITLAEYFPRRFLDGSQRDAHETVTSHIVDVVEDDDVATSSSRTVAGPRDLSSFCIQDLLSLPQKAKSVLIDALMES--DVTNIPTFEARTGASCCMSI

Query:  RFSDEDLLLGSKLHNRPLFVSSYIREQRVSRILIDDGSAVNIMPK
         FSDEDLLLGSKLHNRPL+VS Y+REQRV RILID+GSAVNIMPK
Subjt:  RFSDEDLLLGSKLHNRPLFVSSYIREQRVSRILIDDGSAVNIMPK

TrEMBL top hitse value%identityAlignment
A0A5A7SZ85 Ty3-gypsy retrotransposon protein4.4e-8649.48Show/hide
Query:  MHWGLLYILQGIKPRTFEELATRAHDMELSIASRGNKDLVVPDTRKEKKEVKGIEKVTKS----ATKESMVINTTPLNFSDVPDILEQLLEKQLIELPNC
        MHWGLLYILQGIKPRTFEELATR HD+ELSIASRG KD  VP+ RK+KKE K  EK   S     T +       P + SD+ D+LEQLL+KQLI+LP C
Subjt:  MHWGLLYILQGIKPRTFEELATRAHDMELSIASRGNKDLVVPDTRKEKKEVKGIEKVTKS----ATKESMVINTTPLNFSDVPDILEQLLEKQLIELPNC

Query:  KRLKELGKVNDPNYCKGSNFL---ISSCDYDEKLI--------------QFGTLDPVVVRFQKEATMKGSQEKYDSIEDENEGWTLVVRLKKQKQSYAWK
        KR ++ GKV+DPNYCK    +   +  C   ++LI              +FGT +PVVVRF +E   + SQEK   IE+++EGWT+V R KK+K +   K
Subjt:  KRLKELGKVNDPNYCKGSNFL---ISSCDYDEKLI--------------QFGTLDPVVVRFQKEATMKGSQEKYDSIEDENEGWTLVVRLKKQKQSYAWK

Query:  ESRLFRDSKRKVKSQRKKGKKKTKRSKPVVEESEDLFCPPQPITLAEYFPRRFLDGSQRDAHETVTSHIVDVVEDDDVATSSSRTVAGPRDLSSFCIQDL
        E   +R+ +R  K+Q+ K KKKT++ K + EE +D     + +TLA++FP RFL   Q +    V  H ++  E++ +   S       +DLS F + DL
Subjt:  ESRLFRDSKRKVKSQRKKGKKKTKRSKPVVEESEDLFCPPQPITLAEYFPRRFLDGSQRDAHETVTSHIVDVVEDDDVATSSSRTVAGPRDLSSFCIQDL

Query:  LSLPQKAKSVLIDALMESDVTNIPTFEAR-TGASCCMSIRFSDEDLLLGSKLHNRPLFVSSYIREQRVSRILIDDGSAVNIMPK
        LSLPQ+ K++LI+AL+ S  +++    A       CMSI FSDEDLLLGSKLHNRPL+VS Y+REQRV RIL+D+GSAVNIMPK
Subjt:  LSLPQKAKSVLIDALMESDVTNIPTFEAR-TGASCCMSIRFSDEDLLLGSKLHNRPLFVSSYIREQRVSRILIDDGSAVNIMPK

A0A5A7TZU9 Ribonuclease H1.2e-8644.7Show/hide
Query:  MHWGLLYILQGIKPRTFEELATRAHDMELSIASRGNKDLVVPDTRKEKKEVKGIEKVTKSATKESMVINTTPLNF-------------------------
        MHWGLLYILQGIKPRTFEELATRAHDMELSIA+RGN DL+VP+ RKEKKEVK  +K  K  TKE+MV++TTPL                           
Subjt:  MHWGLLYILQGIKPRTFEELATRAHDMELSIASRGNKDLVVPDTRKEKKEVKGIEKVTKSATKESMVINTTPLNF-------------------------

Query:  --------SDVPDILEQLLEKQLIELPNCKRLKELGKVNDPNYCKGSNF-------------LISSCDYDEK----------------------------
                SD+PD+L+QLLEKQLI+LP CKR  E+G+VNDPNYCK                 LI     D+K                            
Subjt:  --------SDVPDILEQLLEKQLIELPNCKRLKELGKVNDPNYCKGSNF-------------LISSCDYDEK----------------------------

Query:  -LIQFGTLDPVVVRFQKEATMK------GSQEKYDSIEDENEGWTLVVRLKKQKQSYAWKESRLFRDSKRKVKSQRKKGKKKTKRSKPVVEESEDLFCPP
         LIQFG+L+PVV+    E          G +E+   +++  EGWTLV R KK+KQS++ KES  +R  + K KSQR+  +K  ++  P++EESE L  P 
Subjt:  -LIQFGTLDPVVVRFQKEATMK------GSQEKYDSIEDENEGWTLVVRLKKQKQSYAWKESRLFRDSKRKVKSQRKKGKKKTKRSKPVVEESEDLFCPP

Query:  QPITLAEYFPRRFLDGSQRDAHETVTSHIVDVVEDDDVATSSSRTVAGPRDLSSFCIQDLLSLPQKAKSVLIDALMESDVTNIPTFEARTGASCCMSIRF
        +PI L ++FP+ F         E V+ H     E+D   +++      P DL    I DLL+L ++ K  +I+ L   DV+ I T  A T  S CMSI F
Subjt:  QPITLAEYFPRRFLDGSQRDAHETVTSHIVDVVEDDDVATSSSRTVAGPRDLSSFCIQDLLSLPQKAKSVLIDALMESDVTNIPTFEARTGASCCMSIRF

Query:  SDEDLLLGSKLHNRPLFVSSYIREQRVSRILIDDGSAVNIMPK
        SDEDLLLGSKLHNRPL+VS ++REQ++++ILID+GSAVNI+PK
Subjt:  SDEDLLLGSKLHNRPLFVSSYIREQRVSRILIDDGSAVNIMPK

A0A5D3BIH8 Uncharacterized protein1.2e-8644.7Show/hide
Query:  MHWGLLYILQGIKPRTFEELATRAHDMELSIASRGNKDLVVPDTRKEKKEVKGIEKVTKSATKESMVINTTPLNF-------------------------
        MHWGLLYILQGIKPRTFEELATRAHDMELSIA+RGN DL+VP+ RKEKKEVK  +K  K  TKE+MV++TTPL                           
Subjt:  MHWGLLYILQGIKPRTFEELATRAHDMELSIASRGNKDLVVPDTRKEKKEVKGIEKVTKSATKESMVINTTPLNF-------------------------

Query:  --------SDVPDILEQLLEKQLIELPNCKRLKELGKVNDPNYCKGSNF-------------LISSCDYDEK----------------------------
                SD+PD+L+QLLEKQLI+LP CKR  E+G+VNDPNYCK                 LI     D+K                            
Subjt:  --------SDVPDILEQLLEKQLIELPNCKRLKELGKVNDPNYCKGSNF-------------LISSCDYDEK----------------------------

Query:  -LIQFGTLDPVVVRFQKEATMK------GSQEKYDSIEDENEGWTLVVRLKKQKQSYAWKESRLFRDSKRKVKSQRKKGKKKTKRSKPVVEESEDLFCPP
         LIQFG+L+PVV+    E          G +E+   +++  EGWTLV R KK+KQS++ KES  +R  + K KSQR+  +K  ++  P++EESE L  P 
Subjt:  -LIQFGTLDPVVVRFQKEATMK------GSQEKYDSIEDENEGWTLVVRLKKQKQSYAWKESRLFRDSKRKVKSQRKKGKKKTKRSKPVVEESEDLFCPP

Query:  QPITLAEYFPRRFLDGSQRDAHETVTSHIVDVVEDDDVATSSSRTVAGPRDLSSFCIQDLLSLPQKAKSVLIDALMESDVTNIPTFEARTGASCCMSIRF
        +PI L ++FP+ F         E V+ H     E+D   +++      P DL    I DLL+L ++ K  +I+ L   DV+ I T  A T  S CMSI F
Subjt:  QPITLAEYFPRRFLDGSQRDAHETVTSHIVDVVEDDDVATSSSRTVAGPRDLSSFCIQDLLSLPQKAKSVLIDALMESDVTNIPTFEARTGASCCMSIRF

Query:  SDEDLLLGSKLHNRPLFVSSYIREQRVSRILIDDGSAVNIMPK
        SDEDLLLGSKLHNRPL+VS ++REQ++++ILID+GSAVNI+PK
Subjt:  SDEDLLLGSKLHNRPLFVSSYIREQRVSRILIDDGSAVNIMPK

A0A5D3C0W6 Ty3-gypsy retrotransposon protein3.6e-8847.96Show/hide
Query:  MHWGLLYILQGIKPRTFEELATRAHDMELSIASRGNKDLVVPDTRKEKKEVKGIEKVTKSATKESMVINTTPLNF-------------------------
        MHWGLLYILQGIKPRTFEELATRAHDMELSIASRG KD  VP+ +K+KKE    EKV KS+ KESMV+NT PL F                         
Subjt:  MHWGLLYILQGIKPRTFEELATRAHDMELSIASRGNKDLVVPDTRKEKKEVKGIEKVTKSATKESMVINTTPLNF-------------------------

Query:  ---------SDVPDILEQLLEKQLIELPNCKRLKELGKVNDPNYCKGSNF-------------LISSCDYDEK----LIQFGTLDPVVVRFQKEATMKGS
                 SD  D+LEQLLEKQLI+LP CKR ++ G V+DPNYCK                 LI     ++K    L +FGT +PVVVRF +E   + S
Subjt:  ---------SDVPDILEQLLEKQLIELPNCKRLKELGKVNDPNYCKGSNF-------------LISSCDYDEK----LIQFGTLDPVVVRFQKEATMKGS

Query:  QEKYDSIEDENEGWTLVVRLKKQKQSYAWKESRLFRDSKRKVKSQRKKGKKKTKRSKPVVEESEDLFCPPQPITLAEYFPRRFLDGSQRDAHETVTSHIV
        QEK   IE+++E WT+V R KK+K +   KE R +R+ +R  K+Q+ K KKKT++ K + +E +D     + ITLA++FP RFL   Q +    V  H +
Subjt:  QEKYDSIEDENEGWTLVVRLKKQKQSYAWKESRLFRDSKRKVKSQRKKGKKKTKRSKPVVEESEDLFCPPQPITLAEYFPRRFLDGSQRDAHETVTSHIV

Query:  DVVEDDDVATSSSRTVAGPRDLSSFCIQDLLSLPQKAKSVLIDALMESDVT----NIPTFEARTGASCCMSIRFSDEDLLLGSKLHNRPLFVSSYIREQR
        +  E++ +   S       +DLS F + DLLSLPQ+ K++LI+AL+ S  +    +  T+E+      CMSI FS++DLLLGSKLHNRPL+VS Y+REQR
Subjt:  DVVEDDDVATSSSRTVAGPRDLSSFCIQDLLSLPQKAKSVLIDALMESDVT----NIPTFEARTGASCCMSIRFSDEDLLLGSKLHNRPLFVSSYIREQR

Query:  VSRILIDDGSAVNIMPK
        V RIL+D+GSAVNIMPK
Subjt:  VSRILIDDGSAVNIMPK

A0A5D3CUG5 Ty3-gypsy retrotransposon protein7.5e-8644.47Show/hide
Query:  MHWGLLYILQGIKPRTFEELATRAHDMELSIASRGNKDLVVPDTRKEKKEVKGIEKVTKSATKESMVINTTPLNF-------------------------
        MHWGLLYILQGIKPRTFEELATRAHDMELSIA+RGN DL+VP+ RKEKK+VK  +KV K ATKE+MV++TTPL                           
Subjt:  MHWGLLYILQGIKPRTFEELATRAHDMELSIASRGNKDLVVPDTRKEKKEVKGIEKVTKSATKESMVINTTPLNF-------------------------

Query:  --------SDVPDILEQLLEKQLIELPNCKRLKELGKVNDPNYCKGS-------------NFLISSCDYDEK----------------------------
                SDVPD+L+QLLEKQLI+LP CKR  E+G+VNDPNYCK                 LI     D+K                            
Subjt:  --------SDVPDILEQLLEKQLIELPNCKRLKELGKVNDPNYCKGS-------------NFLISSCDYDEK----------------------------

Query:  -LIQFGTLDPVVVRFQKEATMK------GSQEKYDSIEDENEGWTLVVRLKKQKQSYAWKESRLFRDSKRKVKSQRKKGKKKTKRSKPVVEESEDLFCPP
         LIQFG+L+PVV+    E          G +E+   +++  EGWTLV R KK+KQS++ KES  +R  K K KS+R+  +K  ++  P+++ESE L  P 
Subjt:  -LIQFGTLDPVVVRFQKEATMK------GSQEKYDSIEDENEGWTLVVRLKKQKQSYAWKESRLFRDSKRKVKSQRKKGKKKTKRSKPVVEESEDLFCPP

Query:  QPITLAEYFPRRFLDGSQRDAHETVTSHIVDVVEDDDVATSSSRTVAGPRDLSSFCIQDLLSLPQKAKSVLIDALMESDVTNIPTFEARTGASCCMSIRF
        + I L  +FP+ F         E V+ H     E+D   +++      P DL    I DLL+L ++ K  +I+ L   DV+ I T   +   SCCMSI F
Subjt:  QPITLAEYFPRRFLDGSQRDAHETVTSHIVDVVEDDDVATSSSRTVAGPRDLSSFCIQDLLSLPQKAKSVLIDALMESDVTNIPTFEARTGASCCMSIRF

Query:  SDEDLLLGSKLHNRPLFVSSYIREQRVSRILIDDGSAVNIMPK
        SDEDLLLGSKLHNRPL+VS Y+REQ++++ILID+GS VNI+PK
Subjt:  SDEDLLLGSKLHNRPLFVSSYIREQRVSRILIDDGSAVNIMPK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTGGGGACTTCTTTACATCTTGCAAGGGATAAAACCCCGGACCTTTGAAGAATTAGCGACTCGCGCTCATGATATGGAGTTAAGCATCGCTAGTAGAGGAAATAA
AGATCTCGTAGTCCCAGATACGAGGAAGGAAAAGAAGGAAGTCAAAGGCATTGAGAAGGTTACAAAGAGTGCCACGAAAGAATCCATGGTCATCAACACGACCCCTTTGA
ATTTTTCCGATGTCCCAGATATATTGGAACAACTATTAGAGAAACAATTAATTGAACTCCCTAACTGCAAACGACTGAAAGAGTTAGGAAAAGTTAATGATCCTAACTAT
TGCAAGGGATCAAATTTCCTAATCTCCTCATGTGATTATGATGAAAAGCTGATTCAATTTGGGACCCTTGATCCCGTAGTGGTTCGATTCCAAAAAGAAGCCACAATGAA
GGGATCCCAAGAAAAATATGATTCCATCGAAGATGAGAACGAAGGTTGGACCCTTGTCGTTCGTCTAAAAAAGCAAAAGCAAAGTTACGCATGGAAAGAGTCCCGCCTAT
TTCGAGATAGTAAAAGAAAGGTTAAGTCTCAAAGGAAGAAGGGAAAAAAGAAGACAAAGAGGTCAAAGCCTGTCGTGGAGGAAAGTGAAGATTTATTTTGCCCTCCACAA
CCCATAACTTTGGCAGAATACTTCCCAAGGCGCTTTCTCGATGGTAGTCAAAGAGATGCACATGAAACTGTCACAAGTCACATTGTGGATGTGGTGGAAGATGATGATGT
TGCTACTAGCTCATCAAGAACAGTGGCAGGTCCAAGAGACTTATCCTCCTTCTGCATACAGGACTTATTGTCACTTCCTCAGAAGGCTAAAAGTGTCCTTATTGATGCGT
TGATGGAGTCTGATGTTACAAACATCCCAACCTTTGAGGCACGCACAGGTGCTTCGTGTTGCATGTCTATAAGATTTTCTGATGAAGATTTGCTGCTAGGGTCGAAGCTT
CACAATAGACCTTTATTCGTCTCGAGTTACATTCGAGAACAGAGGGTTAGTCGGATCCTCATTGATGATGGATCAGCTGTCAACATAATGCCTAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCACTGGGGACTTCTTTACATCTTGCAAGGGATAAAACCCCGGACCTTTGAAGAATTAGCGACTCGCGCTCATGATATGGAGTTAAGCATCGCTAGTAGAGGAAATAA
AGATCTCGTAGTCCCAGATACGAGGAAGGAAAAGAAGGAAGTCAAAGGCATTGAGAAGGTTACAAAGAGTGCCACGAAAGAATCCATGGTCATCAACACGACCCCTTTGA
ATTTTTCCGATGTCCCAGATATATTGGAACAACTATTAGAGAAACAATTAATTGAACTCCCTAACTGCAAACGACTGAAAGAGTTAGGAAAAGTTAATGATCCTAACTAT
TGCAAGGGATCAAATTTCCTAATCTCCTCATGTGATTATGATGAAAAGCTGATTCAATTTGGGACCCTTGATCCCGTAGTGGTTCGATTCCAAAAAGAAGCCACAATGAA
GGGATCCCAAGAAAAATATGATTCCATCGAAGATGAGAACGAAGGTTGGACCCTTGTCGTTCGTCTAAAAAAGCAAAAGCAAAGTTACGCATGGAAAGAGTCCCGCCTAT
TTCGAGATAGTAAAAGAAAGGTTAAGTCTCAAAGGAAGAAGGGAAAAAAGAAGACAAAGAGGTCAAAGCCTGTCGTGGAGGAAAGTGAAGATTTATTTTGCCCTCCACAA
CCCATAACTTTGGCAGAATACTTCCCAAGGCGCTTTCTCGATGGTAGTCAAAGAGATGCACATGAAACTGTCACAAGTCACATTGTGGATGTGGTGGAAGATGATGATGT
TGCTACTAGCTCATCAAGAACAGTGGCAGGTCCAAGAGACTTATCCTCCTTCTGCATACAGGACTTATTGTCACTTCCTCAGAAGGCTAAAAGTGTCCTTATTGATGCGT
TGATGGAGTCTGATGTTACAAACATCCCAACCTTTGAGGCACGCACAGGTGCTTCGTGTTGCATGTCTATAAGATTTTCTGATGAAGATTTGCTGCTAGGGTCGAAGCTT
CACAATAGACCTTTATTCGTCTCGAGTTACATTCGAGAACAGAGGGTTAGTCGGATCCTCATTGATGATGGATCAGCTGTCAACATAATGCCTAAGTAA
Protein sequenceShow/hide protein sequence
MHWGLLYILQGIKPRTFEELATRAHDMELSIASRGNKDLVVPDTRKEKKEVKGIEKVTKSATKESMVINTTPLNFSDVPDILEQLLEKQLIELPNCKRLKELGKVNDPNY
CKGSNFLISSCDYDEKLIQFGTLDPVVVRFQKEATMKGSQEKYDSIEDENEGWTLVVRLKKQKQSYAWKESRLFRDSKRKVKSQRKKGKKKTKRSKPVVEESEDLFCPPQ
PITLAEYFPRRFLDGSQRDAHETVTSHIVDVVEDDDVATSSSRTVAGPRDLSSFCIQDLLSLPQKAKSVLIDALMESDVTNIPTFEARTGASCCMSIRFSDEDLLLGSKL
HNRPLFVSSYIREQRVSRILIDDGSAVNIMPK