CuGenDBv2

Gene ID	Lag0035445
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	F-box/kelch-repeat protein
Genome location	chr3:21572769..21574386
RNA-Seq Expression	Lag0035445
Synteny	Lag0035445
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004144244.1 F-box/kelch-repeat protein At5g42350 [Cucumis sativus]

2.2e-39

39.74

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Query:  SLYSRGGGCKVGADTGEEIGDPGSRRRSSASEE-------------------------------------------------------------------
        +LY RGGGCKVGADTGEEIGDPGSRRRSSASEE                                                                   
Subjt:  SLYSRGGGCKVGADTGEEIGDPGSRRRSSASEE-------------------------------------------------------------------

Query:  ----------------------------------------EGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI--------------------------
                                                EGYCSG IHALDVSLKQWH+IDADILKGRFMFSI                          
Subjt:  ----------------------------------------EGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI--------------------------

Query:  ------------------------------------------VIQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFI
                                                  V+QSHHNRQDRRY+RSRAGGSLDVYEDPHRLSLRRQVR  VEDND SMLSNRKSYKFI
Subjt:  ------------------------------------------VIQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFI

Query:  RQKSDHS
        RQKSD S
Subjt:  RQKSDHS

XP_008464829.1 PREDICTED: F-box/kelch-repeat protein At5g42350 [Cucumis melo]

1.0e-39

40.07

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Query:  SLYSRGGGCKVGADTGEEIGDPGSRRRSSASEE-------------------------------------------------------------------
        +LY RGGGCKVGADTGEEIGDPGSRRRSSASEE                                                                   
Subjt:  SLYSRGGGCKVGADTGEEIGDPGSRRRSSASEE-------------------------------------------------------------------

Query:  ----------------------------------------EGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI--------------------------
                                                EGYCSG IHALDVSLKQWHRIDADILKGRFMFSI                          
Subjt:  ----------------------------------------EGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI--------------------------

Query:  ------------------------------------------VIQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFI
                                                  V+QSHHNRQDRRY+RSRAGGSLDVYEDPHRLSLRRQVR  VEDND SMLSNRKSYKFI
Subjt:  ------------------------------------------VIQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFI

Query:  RQKSDHS
        RQKSD S
Subjt:  RQKSDHS

XP_022946169.1 F-box/kelch-repeat protein At5g42350-like [Cucurbita moschata]

3.0e-36

37.79

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Query:  SLYSRGGGCKVGADTGEEIGDPGSRRRSSASEE-------------------------------------------------------------------
        +LY RGGGCKVGADTGEEIGDPGSRRRSSASEE                                                                   
Subjt:  SLYSRGGGCKVGADTGEEIGDPGSRRRSSASEE-------------------------------------------------------------------

Query:  ----------------------------------------EGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI--------------------------
                                                EGYCSG IHALDVSLK+WHRIDADILKGRF+FS+                          
Subjt:  ----------------------------------------EGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI--------------------------

Query:  ------------------------------------------VIQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFI
                                                  V+ SHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQ R  +EDND SMLSNRKSYKF 
Subjt:  ------------------------------------------VIQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFI

Query:  RQKSDHS
        RQKS+ S
Subjt:  RQKSDHS

XP_023546956.1 F-box/kelch-repeat protein At5g42350-like [Cucurbita pepo subsp. pepo]

3.0e-36

37.79

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Query:  SLYSRGGGCKVGADTGEEIGDPGSRRRSSASEE-------------------------------------------------------------------
        +LY RGGGCKVGADTGEEIGDPGSRRRSSASEE                                                                   
Subjt:  SLYSRGGGCKVGADTGEEIGDPGSRRRSSASEE-------------------------------------------------------------------

Query:  ----------------------------------------EGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI--------------------------
                                                EGYCSG IHALDVSLK+WHRIDADILKGRF+FS+                          
Subjt:  ----------------------------------------EGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI--------------------------

Query:  ------------------------------------------VIQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFI
                                                  V+ SHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQ R  +EDND SMLSNRKSYKF 
Subjt:  ------------------------------------------VIQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFI

Query:  RQKSDHS
        RQKS+ S
Subjt:  RQKSDHS

XP_038885540.1 F-box/kelch-repeat protein At5g42350-like [Benincasa hispida]

1.7e-39

40.07

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Query:  SLYSRGGGCKVGADTGEEIGDPGSRRRSSASEE-------------------------------------------------------------------
        +LY RGGGCKVGADTGEEIGDPGSRRRSSASEE                                                                   
Subjt:  SLYSRGGGCKVGADTGEEIGDPGSRRRSSASEE-------------------------------------------------------------------

Query:  ----------------------------------------EGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI--------------------------
                                                EGYCSG IHALDVSLKQWHRIDADILKGRFMFSI                          
Subjt:  ----------------------------------------EGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI--------------------------

Query:  ------------------------------------------VIQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFI
                                                  V+QSHHNRQ+RRYLRSRAGGSLDVYEDPHRLSLRRQVR  VEDND SMLSNRKSYKFI
Subjt:  ------------------------------------------VIQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFI

Query:  RQKSDHS
        RQKSD S
Subjt:  RQKSDHS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KCY1 F-box domain-containing protein

1.1e-39

39.74

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Query:  SLYSRGGGCKVGADTGEEIGDPGSRRRSSASEE-------------------------------------------------------------------
        +LY RGGGCKVGADTGEEIGDPGSRRRSSASEE                                                                   
Subjt:  SLYSRGGGCKVGADTGEEIGDPGSRRRSSASEE-------------------------------------------------------------------

Query:  ----------------------------------------EGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI--------------------------
                                                EGYCSG IHALDVSLKQWH+IDADILKGRFMFSI                          
Subjt:  ----------------------------------------EGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI--------------------------

Query:  ------------------------------------------VIQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFI
                                                  V+QSHHNRQDRRY+RSRAGGSLDVYEDPHRLSLRRQVR  VEDND SMLSNRKSYKFI
Subjt:  ------------------------------------------VIQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFI

Query:  RQKSDHS
        RQKSD S
Subjt:  RQKSDHS

A0A1S3CMD2 F-box/kelch-repeat protein At5g42350

4.8e-40

40.07

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Query:  SLYSRGGGCKVGADTGEEIGDPGSRRRSSASEE-------------------------------------------------------------------
        +LY RGGGCKVGADTGEEIGDPGSRRRSSASEE                                                                   
Subjt:  SLYSRGGGCKVGADTGEEIGDPGSRRRSSASEE-------------------------------------------------------------------

Query:  ----------------------------------------EGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI--------------------------
                                                EGYCSG IHALDVSLKQWHRIDADILKGRFMFSI                          
Subjt:  ----------------------------------------EGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI--------------------------

Query:  ------------------------------------------VIQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFI
                                                  V+QSHHNRQDRRY+RSRAGGSLDVYEDPHRLSLRRQVR  VEDND SMLSNRKSYKFI
Subjt:  ------------------------------------------VIQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFI

Query:  RQKSDHS
        RQKSD S
Subjt:  RQKSDHS

A0A5A7T4Z9 F-box/kelch-repeat protein

4.8e-40

40.07

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Query:  SLYSRGGGCKVGADTGEEIGDPGSRRRSSASEE-------------------------------------------------------------------
        +LY RGGGCKVGADTGEEIGDPGSRRRSSASEE                                                                   
Subjt:  SLYSRGGGCKVGADTGEEIGDPGSRRRSSASEE-------------------------------------------------------------------

Query:  ----------------------------------------EGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI--------------------------
                                                EGYCSG IHALDVSLKQWHRIDADILKGRFMFSI                          
Subjt:  ----------------------------------------EGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI--------------------------

Query:  ------------------------------------------VIQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFI
                                                  V+QSHHNRQDRRY+RSRAGGSLDVYEDPHRLSLRRQVR  VEDND SMLSNRKSYKFI
Subjt:  ------------------------------------------VIQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFI

Query:  RQKSDHS
        RQKSD S
Subjt:  RQKSDHS

A0A6J1G315 F-box/kelch-repeat protein At5g42350-like

1.5e-36

37.79

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Query:  SLYSRGGGCKVGADTGEEIGDPGSRRRSSASEE-------------------------------------------------------------------
        +LY RGGGCKVGADTGEEIGDPGSRRRSSASEE                                                                   
Subjt:  SLYSRGGGCKVGADTGEEIGDPGSRRRSSASEE-------------------------------------------------------------------

Query:  ----------------------------------------EGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI--------------------------
                                                EGYCSG IHALDVSLK+WHRIDADILKGRF+FS+                          
Subjt:  ----------------------------------------EGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI--------------------------

Query:  ------------------------------------------VIQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFI
                                                  V+ SHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQ R  +EDND SMLSNRKSYKF 
Subjt:  ------------------------------------------VIQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFI

Query:  RQKSDHS
        RQKS+ S
Subjt:  RQKSDHS

A0A6J1KKD8 F-box/kelch-repeat protein At5g42350-like

5.5e-36

37.46

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Query:  SLYSRGGGCKVGADTGEEIGDPGSRRRSSASEE-------------------------------------------------------------------
        +LY RGGGCKVGADTGEEIGDPG RRRSSASEE                                                                   
Subjt:  SLYSRGGGCKVGADTGEEIGDPGSRRRSSASEE-------------------------------------------------------------------

Query:  ----------------------------------------EGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI--------------------------
                                                EGYCSG IHALDVSLK+WHRIDADILKGRF+FS+                          
Subjt:  ----------------------------------------EGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI--------------------------

Query:  ------------------------------------------VIQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFI
                                                  V+ SHHNRQDRRYLRSR GGSLDVYEDPHRLSLRRQVR  +EDND SMLSNRKSYKF 
Subjt:  ------------------------------------------VIQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFI

Query:  RQKSDHS
        RQKS+ S
Subjt:  RQKSDHS

SwissProt top hits

e value

%identity

Alignment

Q9FII1 F-box/kelch-repeat protein At5g42360

3.0e-15

33.95

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Query:  ASEEEGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI-------------------------------------------------------------V
        A+ ++G  SG IH  DVS  +WHRI+ D+LKGRFM+S+                                                              
Subjt:  ASEEEGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI-------------------------------------------------------------V

Query:  IQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFIRQKSD
        +Q+  NRQDRR+  SR GG  DVYEDPHRLS+RRQ R S + N        KS++ IRQK D
Subjt:  IQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFIRQKSD

Q9FII2 F-box/kelch-repeat protein At5g42350

3.0e-15

33.95

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Query:  ASEEEGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI-------------------------------------------------------------V
        A+ ++G  SG IH  DVS  +WHRI+ D+LKGRFM+S+                                                              
Subjt:  ASEEEGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI-------------------------------------------------------------V

Query:  IQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFIRQKSD
        +Q+  NRQDRR+  SR GG  DVYEDPHRLS+RRQ R S + N        KS++ IRQK D
Subjt:  IQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFIRQKSD

Arabidopsis top hits

e value

%identity

Alignment

AT5G42350.1 Galactose oxidase/kelch repeat superfamily protein

2.2e-16

33.95

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Query:  ASEEEGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI-------------------------------------------------------------V
        A+ ++G  SG IH  DVS  +WHRI+ D+LKGRFM+S+                                                              
Subjt:  ASEEEGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI-------------------------------------------------------------V

Query:  IQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFIRQKSD
        +Q+  NRQDRR+  SR GG  DVYEDPHRLS+RRQ R S + N        KS++ IRQK D
Subjt:  IQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFIRQKSD

AT5G42360.1 Galactose oxidase/kelch repeat superfamily protein

2.2e-16

33.95

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Query:  ASEEEGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI-------------------------------------------------------------V
        A+ ++G  SG IH  DVS  +WHRI+ D+LKGRFM+S+                                                              
Subjt:  ASEEEGYCSGGIHALDVSLKQWHRIDADILKGRFMFSI-------------------------------------------------------------V

Query:  IQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFIRQKSD
        +Q+  NRQDRR+  SR GG  DVYEDPHRLS+RRQ R S + N        KS++ IRQK D
Subjt:  IQSHHNRQDRRYLRSRAGGSLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFIRQKSD

Sequences

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CDS sequence

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ATGGTCAAAGGTTTTGAGCATGTCGAAACGACTCATGAGAAGCATGAGCCAGAAATTGAGGAGGAAGAATCATTATATAGTAGAGGTGGAGGTTGTAAAGTAGGTGCTGA
TACTGGTGAGGAAATTGGTGATCCAGGGAGTAGAAGGAGATCGAGTGCCAGTGAGGAAGAGGGCTATTGCTCCGGCGGGATACATGCACTGGATGTATCTCTAAAGCAAT
GGCATAGAATAGATGCTGATATTCTCAAGGGAAGATTTATGTTCTCTATAGTCATTCAGAGCCATCATAATCGGCAAGATAGACGTTATTTGAGATCACGTGCTGGTGGT
TCATTGGATGTTTATGAGGATCCACACCGGCTCTCGCTAAGACGTCAAGTCAGAACTTCTGTGGAAGACAACGACGATTCAATGTTGTCTAATAGGAAGTCATATAAGTT
CATTCGACAAAAGAGTGATCACAGTCTCGTGCAAAAGGACATCGTAGGTTTGTGA

mRNA sequence

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Protein sequence

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MVKGFEHVETTHEKHEPEIEEEESLYSRGGGCKVGADTGEEIGDPGSRRRSSASEEEGYCSGGIHALDVSLKQWHRIDADILKGRFMFSIVIQSHHNRQDRRYLRSRAGG
SLDVYEDPHRLSLRRQVRTSVEDNDDSMLSNRKSYKFIRQKSDHSLVQKDIVGL

Lag0035445 (gene) of Sponge gourd (AG-4) v1 genome