; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035452 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035452
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr3:21796327..21797337
RNA-Seq ExpressionLag0035452
SyntenyLag0035452
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]6.2e-3243.43Show/hide
Query:  VREESSRKRKAAVREARLEPGEQGMYSLLLDKNSLNLEFTEKEVARVHHLHNDALVVTLTIANAKVHRILVDGGSSNDVLSTVAFDAMKLGRDHLKPSLT
        +  ES RKRKA VREAR   G+  +Y   +   S+ +EF+E E   V H HNDALV+TL IANAKVHRILVDGGSS D+ S  A+ AM LG + LK SLT
Subjt:  VREESSRKRKAAVREARLEPGEQGMYSLLLDKNSLNLEFTEKEVARVHHLHNDALVVTLTIANAKVHRILVDGGSSNDVLSTVAFDAMKLGRDHLKPSLT

Query:  PLVGFGGEKVNPQGCIELPVTFGEGQQSTTRVGD---------------------------------------------GEQMTSRECYFMALRNIDR
        PL+GFGGE++ P+G IELP+TF    +S TR+ D                                             GEQ  SRECY+ ++R  D+
Subjt:  PLVGFGGEKVNPQGCIELPVTFGEGQQSTTRVGD---------------------------------------------GEQMTSRECYFMALRNIDR

XP_022154102.1 uncharacterized protein LOC111021438 [Momordica charantia]3.7e-2955.22Show/hide
Query:  VREESSRKRKAAVREARLEPGEQGMYSLLLDKNSLNLEFTEKEVARVHHLHNDALVVTLTIANAKVHRILVDGGSSNDVLSTVAFDAMKLGRDHLKPSLT
        +  ES RKRKA VREAR    +  +Y   +   S  +EF++  V  + H HNDAL++TL IANAKVHRILVDGGSS D +S  A+ AM LG++ LK SLT
Subjt:  VREESSRKRKAAVREARLEPGEQGMYSLLLDKNSLNLEFTEKEVARVHHLHNDALVVTLTIANAKVHRILVDGGSSNDVLSTVAFDAMKLGRDHLKPSLT

Query:  PLVGFGGEKVNPQGCIELPVTFGEGQQSTTRVGD
        PL+GFGGE+V P G IELPVTF  G +S T++ D
Subjt:  PLVGFGGEKVNPQGCIELPVTFGEGQQSTTRVGD

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]1.3e-2942.42Show/hide
Query:  VREESSRKRKAAVREARLEPGEQGMYSLLLDKNSLNLEFTEKEVARVHHLHNDALVVTLTIANAKVHRILVDGGSSNDVLSTVAFDAMKLGRDHLKPSLT
        +  ES RKRKA VREAR    +  +Y   +    + +EF+E E   + H HNDALV+TL IAN KVHRILVDGGSS D++S  A+ AM LG   LK S  
Subjt:  VREESSRKRKAAVREARLEPGEQGMYSLLLDKNSLNLEFTEKEVARVHHLHNDALVVTLTIANAKVHRILVDGGSSNDVLSTVAFDAMKLGRDHLKPSLT

Query:  PLVGFGGEKVNPQGCIELPVTFGEGQQSTTRVGD---------------------------------------------GEQMTSRECYFMALRNIDR
        PLVGFGGE+V  +G IELPVTFG G +S T++ D                                             GEQ  SRECY  ++R+ DR
Subjt:  PLVGFGGEKVNPQGCIELPVTFGEGQQSTTRVGD---------------------------------------------GEQMTSRECYFMALRNIDR

XP_022158432.1 uncharacterized protein LOC111024924 [Momordica charantia]4.9e-2953.73Show/hide
Query:  VREESSRKRKAAVREARLEPGEQGMYSLLLDKNSLNLEFTEKEVARVHHLHNDALVVTLTIANAKVHRILVDGGSSNDVLSTVAFDAMKLGRDHLKPSLT
        + +ES RKRKA V+EAR   G+  +Y   +   S  +EF+E E   + H HNDALV+TL IANAKVHRILV+ GSS D++S   + AM LG   LK S  
Subjt:  VREESSRKRKAAVREARLEPGEQGMYSLLLDKNSLNLEFTEKEVARVHHLHNDALVVTLTIANAKVHRILVDGGSSNDVLSTVAFDAMKLGRDHLKPSLT

Query:  PLVGFGGEKVNPQGCIELPVTFGEGQQSTTRVGD
        PL+GFGGE+V P+G IELPVTFG G +S T++ D
Subjt:  PLVGFGGEKVNPQGCIELPVTFGEGQQSTTRVGD

XP_022158687.1 uncharacterized protein LOC111025147 [Momordica charantia]2.4e-2840.91Show/hide
Query:  VREESSRKRKAAVREARLEPGEQGMYSLLLDKNSLNLEFTEKEVARVHHLHNDALVVTLTIANAKVHRILVDGGSSNDVLSTVAFDAMKLGRDHLKPSLT
        ++ ES RKRKA VREAR    +  +Y   +   S+ +EF+E E   + H HNDALV+TL IAN KVHRILVDGGSS D++S   +  M LG   LK S  
Subjt:  VREESSRKRKAAVREARLEPGEQGMYSLLLDKNSLNLEFTEKEVARVHHLHNDALVVTLTIANAKVHRILVDGGSSNDVLSTVAFDAMKLGRDHLKPSLT

Query:  PLVGFGGEKVNPQGCIELPVTFGEGQQSTTRVGD---------------------------------------------GEQMTSRECYFMALRNIDR
        PL+GFG E+V P+G IEL VTFG G +S T++ D                                             GEQ  SRECY+ ++R  DR
Subjt:  PLVGFGGEKVNPQGCIELPVTFGEGQQSTTRVGD---------------------------------------------GEQMTSRECYFMALRNIDR

TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159013.0e-3243.43Show/hide
Query:  VREESSRKRKAAVREARLEPGEQGMYSLLLDKNSLNLEFTEKEVARVHHLHNDALVVTLTIANAKVHRILVDGGSSNDVLSTVAFDAMKLGRDHLKPSLT
        +  ES RKRKA VREAR   G+  +Y   +   S+ +EF+E E   V H HNDALV+TL IANAKVHRILVDGGSS D+ S  A+ AM LG + LK SLT
Subjt:  VREESSRKRKAAVREARLEPGEQGMYSLLLDKNSLNLEFTEKEVARVHHLHNDALVVTLTIANAKVHRILVDGGSSNDVLSTVAFDAMKLGRDHLKPSLT

Query:  PLVGFGGEKVNPQGCIELPVTFGEGQQSTTRVGD---------------------------------------------GEQMTSRECYFMALRNIDR
        PL+GFGGE++ P+G IELP+TF    +S TR+ D                                             GEQ  SRECY+ ++R  D+
Subjt:  PLVGFGGEKVNPQGCIELPVTFGEGQQSTTRVGD---------------------------------------------GEQMTSRECYFMALRNIDR

A0A6J1DKR9 uncharacterized protein LOC1110214381.8e-2955.22Show/hide
Query:  VREESSRKRKAAVREARLEPGEQGMYSLLLDKNSLNLEFTEKEVARVHHLHNDALVVTLTIANAKVHRILVDGGSSNDVLSTVAFDAMKLGRDHLKPSLT
        +  ES RKRKA VREAR    +  +Y   +   S  +EF++  V  + H HNDAL++TL IANAKVHRILVDGGSS D +S  A+ AM LG++ LK SLT
Subjt:  VREESSRKRKAAVREARLEPGEQGMYSLLLDKNSLNLEFTEKEVARVHHLHNDALVVTLTIANAKVHRILVDGGSSNDVLSTVAFDAMKLGRDHLKPSLT

Query:  PLVGFGGEKVNPQGCIELPVTFGEGQQSTTRVGD
        PL+GFGGE+V P G IELPVTF  G +S T++ D
Subjt:  PLVGFGGEKVNPQGCIELPVTFGEGQQSTTRVGD

A0A6J1DQY2 uncharacterized protein LOC1110223216.2e-3042.42Show/hide
Query:  VREESSRKRKAAVREARLEPGEQGMYSLLLDKNSLNLEFTEKEVARVHHLHNDALVVTLTIANAKVHRILVDGGSSNDVLSTVAFDAMKLGRDHLKPSLT
        +  ES RKRKA VREAR    +  +Y   +    + +EF+E E   + H HNDALV+TL IAN KVHRILVDGGSS D++S  A+ AM LG   LK S  
Subjt:  VREESSRKRKAAVREARLEPGEQGMYSLLLDKNSLNLEFTEKEVARVHHLHNDALVVTLTIANAKVHRILVDGGSSNDVLSTVAFDAMKLGRDHLKPSLT

Query:  PLVGFGGEKVNPQGCIELPVTFGEGQQSTTRVGD---------------------------------------------GEQMTSRECYFMALRNIDR
        PLVGFGGE+V  +G IELPVTFG G +S T++ D                                             GEQ  SRECY  ++R+ DR
Subjt:  PLVGFGGEKVNPQGCIELPVTFGEGQQSTTRVGD---------------------------------------------GEQMTSRECYFMALRNIDR

A0A6J1DX76 uncharacterized protein LOC1110249242.4e-2953.73Show/hide
Query:  VREESSRKRKAAVREARLEPGEQGMYSLLLDKNSLNLEFTEKEVARVHHLHNDALVVTLTIANAKVHRILVDGGSSNDVLSTVAFDAMKLGRDHLKPSLT
        + +ES RKRKA V+EAR   G+  +Y   +   S  +EF+E E   + H HNDALV+TL IANAKVHRILV+ GSS D++S   + AM LG   LK S  
Subjt:  VREESSRKRKAAVREARLEPGEQGMYSLLLDKNSLNLEFTEKEVARVHHLHNDALVVTLTIANAKVHRILVDGGSSNDVLSTVAFDAMKLGRDHLKPSLT

Query:  PLVGFGGEKVNPQGCIELPVTFGEGQQSTTRVGD
        PL+GFGGE+V P+G IELPVTFG G +S T++ D
Subjt:  PLVGFGGEKVNPQGCIELPVTFGEGQQSTTRVGD

A0A6J1DXV4 uncharacterized protein LOC1110251471.2e-2840.91Show/hide
Query:  VREESSRKRKAAVREARLEPGEQGMYSLLLDKNSLNLEFTEKEVARVHHLHNDALVVTLTIANAKVHRILVDGGSSNDVLSTVAFDAMKLGRDHLKPSLT
        ++ ES RKRKA VREAR    +  +Y   +   S+ +EF+E E   + H HNDALV+TL IAN KVHRILVDGGSS D++S   +  M LG   LK S  
Subjt:  VREESSRKRKAAVREARLEPGEQGMYSLLLDKNSLNLEFTEKEVARVHHLHNDALVVTLTIANAKVHRILVDGGSSNDVLSTVAFDAMKLGRDHLKPSLT

Query:  PLVGFGGEKVNPQGCIELPVTFGEGQQSTTRVGD---------------------------------------------GEQMTSRECYFMALRNIDR
        PL+GFG E+V P+G IEL VTFG G +S T++ D                                             GEQ  SRECY+ ++R  DR
Subjt:  PLVGFGGEKVNPQGCIELPVTFGEGQQSTTRVGD---------------------------------------------GEQMTSRECYFMALRNIDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCGGAGCCGACATGAGCACTCCTCGACTAATGGCCGAGGCCGAGCAGAGGCCAAGGAGCCACGGGGTCGTGCAGAACCGAAAGCCAAGTTTGACAGGTATACACC
GCAAACAACTCCACTTGAACAGGGGGAAGAGGCCAGCACAGACAGAACCAGGCAAAGGGGGCAACAACCCACCACTCGAGATACGAACCATCCTCGGAAGATTGTCAGAG
AAGAGTCGAGTAGGAAGCGAAAAGCGGCGGTTCGAGAAGCACGGTTAGAGCCAGGAGAGCAAGGTATGTACTCGCTCTTACTCGATAAAAACTCGCTGAATTTAGAGTTT
ACAGAGAAAGAGGTCGCGAGGGTACACCATCTGCACAATGACGCGCTGGTGGTCACTCTAACGATTGCCAACGCAAAGGTTCACCGGATCCTCGTTGACGGAGGGAGTTC
TAATGATGTTCTCTCAACCGTTGCGTTTGATGCAATGAAGCTAGGAAGGGATCACCTGAAGCCGAGCCTCACACCATTGGTAGGTTTCGGTGGAGAAAAGGTAAATCCAC
AGGGGTGCATCGAGCTACCGGTAACCTTTGGTGAAGGACAACAATCGACCACAAGGGTCGGTGATGGTGAGCAGATGACATCAAGGGAATGCTACTTTATGGCGCTCAGA
AACATCGACAGAAAGGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCCGGAGCCGACATGAGCACTCCTCGACTAATGGCCGAGGCCGAGCAGAGGCCAAGGAGCCACGGGGTCGTGCAGAACCGAAAGCCAAGTTTGACAGGTATACACC
GCAAACAACTCCACTTGAACAGGGGGAAGAGGCCAGCACAGACAGAACCAGGCAAAGGGGGCAACAACCCACCACTCGAGATACGAACCATCCTCGGAAGATTGTCAGAG
AAGAGTCGAGTAGGAAGCGAAAAGCGGCGGTTCGAGAAGCACGGTTAGAGCCAGGAGAGCAAGGTATGTACTCGCTCTTACTCGATAAAAACTCGCTGAATTTAGAGTTT
ACAGAGAAAGAGGTCGCGAGGGTACACCATCTGCACAATGACGCGCTGGTGGTCACTCTAACGATTGCCAACGCAAAGGTTCACCGGATCCTCGTTGACGGAGGGAGTTC
TAATGATGTTCTCTCAACCGTTGCGTTTGATGCAATGAAGCTAGGAAGGGATCACCTGAAGCCGAGCCTCACACCATTGGTAGGTTTCGGTGGAGAAAAGGTAAATCCAC
AGGGGTGCATCGAGCTACCGGTAACCTTTGGTGAAGGACAACAATCGACCACAAGGGTCGGTGATGGTGAGCAGATGACATCAAGGGAATGCTACTTTATGGCGCTCAGA
AACATCGACAGAAAGGTCTAA
Protein sequenceShow/hide protein sequence
MGRSRHEHSSTNGRGRAEAKEPRGRAEPKAKFDRYTPQTTPLEQGEEASTDRTRQRGQQPTTRDTNHPRKIVREESSRKRKAAVREARLEPGEQGMYSLLLDKNSLNLEF
TEKEVARVHHLHNDALVVTLTIANAKVHRILVDGGSSNDVLSTVAFDAMKLGRDHLKPSLTPLVGFGGEKVNPQGCIELPVTFGEGQQSTTRVGDGEQMTSRECYFMALR
NIDRKV