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Lag0035456 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035456
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr3:21847569..21847889
RNA-Seq ExpressionLag0035456
SyntenyLag0035456
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038884535.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X1 [Benincasa hispida]1.5e-0435.79Show/hide
Query:  ECISVIENSLLQDGSYSWAGYIISSKLRNLEVVIKERSADCENRMKKNDNNLILEIAYLDAKSEPRGLSSNELQVRSYAKGELLELYLIEEINMI
        EC  +IENS L  G   WAG+ + S+LR ++  +K   A+ E   K  + +L+ EI   D +++     S E  VR   K +LL LY  EE ++I
Subjt:  ECISVIENSLLQDGSYSWAGYIISSKLRNLEVVIKERSADCENRMKKNDNNLILEIAYLDAKSEPRGLSSNELQVRSYAKGELLELYLIEEINMI
XP_038884536.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X2 [Benincasa hispida]1.5e-0435.79Show/hide
Query:  ECISVIENSLLQDGSYSWAGYIISSKLRNLEVVIKERSADCENRMKKNDNNLILEIAYLDAKSEPRGLSSNELQVRSYAKGELLELYLIEEINMI
        EC  +IENS L  G   WAG+ + S+LR ++  +K   A+ E   K  + +L+ EI   D +++     S E  VR   K +LL LY  EE ++I
Subjt:  ECISVIENSLLQDGSYSWAGYIISSKLRNLEVVIKERSADCENRMKKNDNNLILEIAYLDAKSEPRGLSSNELQVRSYAKGELLELYLIEEINMI
XP_038884537.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X3 [Benincasa hispida]1.5e-0435.79Show/hide
Query:  ECISVIENSLLQDGSYSWAGYIISSKLRNLEVVIKERSADCENRMKKNDNNLILEIAYLDAKSEPRGLSSNELQVRSYAKGELLELYLIEEINMI
        EC  +IENS L  G   WAG+ + S+LR ++  +K   A+ E   K  + +L+ EI   D +++     S E  VR   K +LL LY  EE ++I
Subjt:  ECISVIENSLLQDGSYSWAGYIISSKLRNLEVVIKERSADCENRMKKNDNNLILEIAYLDAKSEPRGLSSNELQVRSYAKGELLELYLIEEINMI
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATGTTTGAAAACTCAAGGGTGTCAAACGGAATGCATATCAGTTATCGAGAATTCTCTCCTACAAGATGGTTCCTATAGTTGGGCTGGATATATAATATCTTCAAA
GCTAAGAAATTTGGAAGTAGTCATCAAAGAACGGTCTGCGGATTGTGAAAATAGAATGAAGAAAAACGATAATAACCTCATCTTGGAAATAGCTTACCTCGATGCCAAAT
CAGAACCAAGAGGCCTTTCCTCCAATGAACTCCAAGTAAGGTCTTATGCCAAGGGTGAATTACTGGAGTTATATTTGATTGAGGAGATAAACATGATATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCATGTTTGAAAACTCAAGGGTGTCAAACGGAATGCATATCAGTTATCGAGAATTCTCTCCTACAAGATGGTTCCTATAGTTGGGCTGGATATATAATATCTTCAAA
GCTAAGAAATTTGGAAGTAGTCATCAAAGAACGGTCTGCGGATTGTGAAAATAGAATGAAGAAAAACGATAATAACCTCATCTTGGAAATAGCTTACCTCGATGCCAAAT
CAGAACCAAGAGGCCTTTCCTCCAATGAACTCCAAGTAAGGTCTTATGCCAAGGGTGAATTACTGGAGTTATATTTGATTGAGGAGATAAACATGATATAG
Protein sequenceShow/hide protein sequence
MSCLKTQGCQTECISVIENSLLQDGSYSWAGYIISSKLRNLEVVIKERSADCENRMKKNDNNLILEIAYLDAKSEPRGLSSNELQVRSYAKGELLELYLIEEINMI