; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035487 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035487
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr3:22447421..22448956
RNA-Seq ExpressionLag0035487
SyntenyLag0035487
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]3.1e-3231.98Show/hide
Query:  MNPSDLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLGAEVMRRNFRVAWK--------------------------------GP
        M  S+L++EW +  LT EE+  +V  D  A++ TG+ L   L+ KLL  RS+   V++   ++AWK                                GP
Subjt:  MNPSDLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLGAEVMRRNFRVAWK--------------------------------GP

Query:  WIFENFLLVLELPIRGLKPSDYQFSSSAFWIHVFDLPLDWFNQSMAEQIGNVM---------------GASLRIRVRIDLSRPLRRRIRIYPDGPLIGLW
        W F+  L++++ P+   KP D  F + + W+H FDL L   N++MA ++GN +               G+ LR+RVR D+ +PL R I++  DGP+ G W
Subjt:  WIFENFLLVLELPIRGLKPSDYQFSSSAFWIHVFDLPLDWFNQSMAEQIGNVM---------------GASLRIRVRIDLSRPLRRRIRIYPDGPLIGLW

Query:  VPFRYERLPELCSFYGIIGHVSRDCALSLRSEWGSGSIPQYGDWLRF
        +P +YERLP+     G + H+ +DC+             QYG WLRF
Subjt:  VPFRYERLPELCSFYGIIGHVSRDCALSLRSEWGSGSIPQYGDWLRF

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]4.7e-4138.46Show/hide
Query:  MNPSDLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLGAEVMRRNFRVAWK-------------------------------GPW
        M+  +L+ +W    LT EE+  ++  D DAV    Q L + L+GKLL  R + A+V+ R   +AWK                               GPW
Subjt:  MNPSDLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLGAEVMRRNFRVAWK-------------------------------GPW

Query:  IFENFLLVLELPIRGLKPSDYQFSSSAFWIHVFDLPLDWFNQSMAEQIGNVM---------------GASLRIRVRIDLSRPLRRRIRIYPDGPLIGLWV
         F+  L+VL+ P      S+ +F+  AFWIH+FDLP+ W N++MA ++GN +               GASLRIRV ID+++PLRR I+I  DGP+ G W+
Subjt:  IFENFLLVLELPIRGLKPSDYQFSSSAFWIHVFDLPLDWFNQSMAEQIGNVM---------------GASLRIRVRIDLSRPLRRRIRIYPDGPLIGLWV

Query:  PFRYERLPELCSFYGIIGHVSRDC-ALSLRSEWGSGSIPQYGDWLRF
        P +YERLP+ C F G+IGH S DC A  L ++  S +  +YG WLRF
Subjt:  PFRYERLPELCSFYGIIGHVSRDC-ALSLRSEWGSGSIPQYGDWLRF

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.9e-2932.51Show/hide
Query:  DLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLGAEVMRRNFRVAWK--------------------------------GPWIFE
        DL++EW +  LT EEE T++  D  A   TG  L   L+GKL   R +   VM+   R AWK                                GPW F+
Subjt:  DLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLGAEVMRRNFRVAWK--------------------------------GPWIFE

Query:  NFLLVLELPIRGLKPSDYQFSSSAFWIHVFDLPLDWFNQSMAEQIGNVM---------------GASLRIRVRIDLSRPLRRRIRIYPDGPLIGLWVPFR
          L+++  P+  + PS+  F+    W+  FDLPL    + MA ++GN +               G++LR+RV +D+S+PLRR I++  DGP+ G W+P +
Subjt:  NFLLVLELPIRGLKPSDYQFSSSAFWIHVFDLPLDWFNQSMAEQIGNVM---------------GASLRIRVRIDLSRPLRRRIRIYPDGPLIGLWVPFR

Query:  YERLPELCSFYGIIGHVSRDCALSLRSEWGSGSIPQYGDWLRF
        YERLP+ C            C LS      S    QYG WLR+
Subjt:  YERLPELCSFYGIIGHVSRDCALSLRSEWGSGSIPQYGDWLRF

XP_023916508.1 uncharacterized protein LOC112028084 [Quercus suber]1.5e-2331.43Show/hide
Query:  DLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFC---LLGKLLCHRSLGAEVMRRNFRVAWK-------------------------------GPWI
        DL++E  H+ LT+EEE+    +     +   +L+  C   L+G+LL +R      ++   R AWK                               GPW 
Subjt:  DLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFC---LLGKLLCHRSLGAEVMRRNFRVAWK-------------------------------GPWI

Query:  FENFLLVLELPIRGLKPSDYQFSSSAFWIHVFDLPLDWFNQSMAEQIGNVMG---------------ASLRIRVRIDLSRPLRR-RIRIYPDGPLIGLWV
        FEN LL+L+   +G+  ++  F+ S FW+ ++ LP D  ++ +   IGN +G                 +RIRV I L+RPLRR  + + P+G    ++ 
Subjt:  FENFLLVLELPIRGLKPSDYQFSSSAFWIHVFDLPLDWFNQSMAEQIGNVMG---------------ASLRIRVRIDLSRPLRR-RIRIYPDGPLIGLWV

Query:  PFRYERLPELCSFYGIIGHVSRDCALSLRSEWGSGSIPQYGDWLR
         FRYERLP  C   G++GH  R C     SE  +  +PQYGDWLR
Subjt:  PFRYERLPELCSFYGIIGHVSRDCALSLRSEWGSGSIPQYGDWLR

XP_027060738.1 uncharacterized protein LOC113687293 [Coffea arabica]2.6e-2331Show/hide
Query:  EEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLGAEVMRRNFRVAWK-------------------------------GPWIFENFLLVLELPIRGL
        +EEE+  +  D D +D    L   C+LGKL   +    E +    +  W                                GPW F++ LLV+   I  +
Subjt:  EEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLGAEVMRRNFRVAWK-------------------------------GPWIFENFLLVLELPIRGL

Query:  KPSDYQFSSSAFWIHVFDLPLDWFNQSMAEQIGNVMGA---------------SLRIRVRIDLSRPLRRRIRIYPDGPLIGLWVPFRYERLPELCSFYGI
        + ++ +  + +FW+ V++LPL W N   AE +GN +G                 LRIRV+I L  PL+R + ++ +G +    V F+YERLP LC + G 
Subjt:  KPSDYQFSSSAFWIHVFDLPLDWFNQSMAEQIGNVMGA---------------SLRIRVRIDLSRPLRRRIRIYPDGPLIGLWVPFRYERLPELCSFYGI

Query:  IGHVSRDCALSLRSEWGSGSIPQYGDWLR
        IGH  RDC L L +       PQYG WLR
Subjt:  IGHVSRDCALSLRSEWGSGSIPQYGDWLR

TrEMBL top hitse value%identityAlignment
A0A2N9GWE9 Uncharacterized protein1.5e-2431.1Show/hide
Query:  DLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLGAEVMRRNFRVAWKG--------------------------------PWIFE
        +LV+EW   SLTE E    VT   DA++ +  +   CLLGKL   +    E ++      W G                                PW+F+
Subjt:  DLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLGAEVMRRNFRVAWKG--------------------------------PWIFE

Query:  NFLLVLELPIRGLKPSDYQFSSSAFWIHVFDLPLDWFNQSMAEQIGNVM---------------GASLRIRVRIDLSRPLRRRIRIYPDGPLIGLWVPFR
        N LL+L+        S  QFS   FW+  + +PL +  +   EQ+G+V                G  LR+R+ +D+++P+ R  R+     L  +WV F+
Subjt:  NFLLVLELPIRGLKPSDYQFSSSAFWIHVFDLPLDWFNQSMAEQIGNVM---------------GASLRIRVRIDLSRPLRRRIRIYPDGPLIGLWVPFR

Query:  YERLPELCSFYGIIGHVSRDCALSLRSEWGS-GSIPQYGDWLRFS-----RKGM
        YERLP LC   G+IGH+ RDC    ++   S G + QYG WLR S     R+GM
Subjt:  YERLPELCSFYGIIGHVSRDCALSLRSEWGS-GSIPQYGDWLRFS-----RKGM

A0A2N9H0Z5 CCHC-type domain-containing protein2.3e-2535.68Show/hide
Query:  DLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLG--AEVMRRNFRVAWKGPWIFENFLLVLELPIRGLKPSDYQFSSSAFWIHVF
        +LV+EW   SLTE+E     T + DA+  +      CLLGKL+  +      +   R  RV    PW+F N+LL L         +  QFS   FW+ + 
Subjt:  DLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLG--AEVMRRNFRVAWKGPWIFENFLLVLELPIRGLKPSDYQFSSSAFWIHVF

Query:  DLPLDWFNQSMAEQIGNVM---------------GASLRIRVRIDLSRPLRRRIRIYPDGPLIGLWVPFRYERLPELCSFYGIIGHVSRDCALSLRSEWG
         +PL++  +   +++GN M               G  LRIR+ +D ++P+ R  R+        LWV F+YERLP LC F G++GH  RDC  SLRS   
Subjt:  DLPLDWFNQSMAEQIGNVM---------------GASLRIRVRIDLSRPLRRRIRIYPDGPLIGLWVPFRYERLPELCSFYGIIGHVSRDCALSLRSEWG

Query:  SGSI-PQYGDWLR
          +I  QYG WLR
Subjt:  SGSI-PQYGDWLR

A0A6J1BSZ1 uncharacterized protein LOC1110054811.5e-3231.98Show/hide
Query:  MNPSDLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLGAEVMRRNFRVAWK--------------------------------GP
        M  S+L++EW +  LT EE+  +V  D  A++ TG+ L   L+ KLL  RS+   V++   ++AWK                                GP
Subjt:  MNPSDLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLGAEVMRRNFRVAWK--------------------------------GP

Query:  WIFENFLLVLELPIRGLKPSDYQFSSSAFWIHVFDLPLDWFNQSMAEQIGNVM---------------GASLRIRVRIDLSRPLRRRIRIYPDGPLIGLW
        W F+  L++++ P+   KP D  F + + W+H FDL L   N++MA ++GN +               G+ LR+RVR D+ +PL R I++  DGP+ G W
Subjt:  WIFENFLLVLELPIRGLKPSDYQFSSSAFWIHVFDLPLDWFNQSMAEQIGNVM---------------GASLRIRVRIDLSRPLRRRIRIYPDGPLIGLW

Query:  VPFRYERLPELCSFYGIIGHVSRDCALSLRSEWGSGSIPQYGDWLRF
        +P +YERLP+     G + H+ +DC+             QYG WLRF
Subjt:  VPFRYERLPELCSFYGIIGHVSRDCALSLRSEWGSGSIPQYGDWLRF

A0A6J1DU55 uncharacterized protein LOC1110231352.3e-4138.46Show/hide
Query:  MNPSDLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLGAEVMRRNFRVAWK-------------------------------GPW
        M+  +L+ +W    LT EE+  ++  D DAV    Q L + L+GKLL  R + A+V+ R   +AWK                               GPW
Subjt:  MNPSDLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLGAEVMRRNFRVAWK-------------------------------GPW

Query:  IFENFLLVLELPIRGLKPSDYQFSSSAFWIHVFDLPLDWFNQSMAEQIGNVM---------------GASLRIRVRIDLSRPLRRRIRIYPDGPLIGLWV
         F+  L+VL+ P      S+ +F+  AFWIH+FDLP+ W N++MA ++GN +               GASLRIRV ID+++PLRR I+I  DGP+ G W+
Subjt:  IFENFLLVLELPIRGLKPSDYQFSSSAFWIHVFDLPLDWFNQSMAEQIGNVM---------------GASLRIRVRIDLSRPLRRRIRIYPDGPLIGLWV

Query:  PFRYERLPELCSFYGIIGHVSRDC-ALSLRSEWGSGSIPQYGDWLRF
        P +YERLP+ C F G+IGH S DC A  L ++  S +  +YG WLRF
Subjt:  PFRYERLPELCSFYGIIGHVSRDC-ALSLRSEWGSGSIPQYGDWLRF

A0A6J1DX30 uncharacterized protein LOC1110248749.1e-3032.51Show/hide
Query:  DLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLGAEVMRRNFRVAWK--------------------------------GPWIFE
        DL++EW +  LT EEE T++  D  A   TG  L   L+GKL   R +   VM+   R AWK                                GPW F+
Subjt:  DLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFCLLGKLLCHRSLGAEVMRRNFRVAWK--------------------------------GPWIFE

Query:  NFLLVLELPIRGLKPSDYQFSSSAFWIHVFDLPLDWFNQSMAEQIGNVM---------------GASLRIRVRIDLSRPLRRRIRIYPDGPLIGLWVPFR
          L+++  P+  + PS+  F+    W+  FDLPL    + MA ++GN +               G++LR+RV +D+S+PLRR I++  DGP+ G W+P +
Subjt:  NFLLVLELPIRGLKPSDYQFSSSAFWIHVFDLPLDWFNQSMAEQIGNVM---------------GASLRIRVRIDLSRPLRRRIRIYPDGPLIGLWVPFR

Query:  YERLPELCSFYGIIGHVSRDCALSLRSEWGSGSIPQYGDWLRF
        YERLP+ C            C LS      S    QYG WLR+
Subjt:  YERLPELCSFYGIIGHVSRDCALSLRSEWGSGSIPQYGDWLRF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAAGGAGGCGTTTTCCGGCGCGATTTTAGGAGCCTTGGTCGGAATGGTCAATCTTCGGCGAAATCTTTTTGTAGTACTGGTATACCAGGGGGTTCGTCGGAGCA
TTGGAATCTCATCGTTTACGGTGGTATCTCGTTTCTTCTTACCCTACTGCTATTTCTCCCTTTTTATTTTGCATTCGATTCTATGAATCCTTCTGATTTGGTTGATGAAT
GGGTTCACTTGAGCTTAACGGAGGAGGAAGAAATTACTTCGGTGACTGCGGATAGAGATGCGGTTGATAGAACCGGACAGCTGTTGGGATTTTGTCTTTTGGGCAAGCTG
CTGTGTCATCGATCGTTGGGAGCTGAGGTTATGCGGAGGAATTTTAGGGTTGCATGGAAGGGGCCTTGGATTTTTGAAAATTTCCTTCTGGTCTTGGAGCTTCCAATTCG
TGGTCTTAAGCCATCTGATTACCAATTTTCTTCTTCGGCTTTTTGGATCCATGTGTTTGATTTGCCTCTGGACTGGTTCAATCAAAGTATGGCAGAGCAAATTGGCAATG
TCATGGGAGCTAGTCTGAGAATAAGAGTTAGAATCGACCTGTCTCGACCTCTTCGGCGTAGGATTCGTATTTATCCGGATGGTCCCCTTATTGGGTTGTGGGTTCCCTTC
AGGTATGAACGTCTTCCTGAGCTATGTTCGTTCTATGGTATTATTGGTCATGTATCGCGTGATTGTGCCCTGTCTCTTCGATCGGAATGGGGTTCTGGTTCAATCCCACA
ATATGGGGATTGGTTGCGTTTTTCAAGGAAGGGCATGATTCTGAATCACTTCACGGCAAGAGATGTTGGTCGTGCCTCTGTTCGAGAGCCGCCTCAAGGTCATCGCTTAA
CGATTGAGGTAGCTTTGATGCCGAATACCGTTGTTCCGGTAGATGAATTGCCAAGGCAGCCCCAATGTGGAATTCGAATTACGGAGCCGACTGAAGAGCAGTATCGGGGA
GGATCAGCTAAGGGGTCACCAACATTGTATTCCTTGTCCGGAGGGTCGAACGTGTCCATCAAAGGCAAAGAAAAAGTTGTTGAGGTGGCGAGCAAGTACAGGGCAGGTCT
CCCTCGATGGTTGCCGAAAAATTCTGATCGGAACAGTCTTCCAACTCCAGAAGTGACGGTGCAACGGGATCCTGTGCCAGTGACTGTTACAACAAAGGAGACAGAGAAAT
TAAAGCAAACGTTTAATGAAGGACCAAGTGATTTGCAAGGGCATTTAAGGCTCGTAACCTGCGTTTATCAGAAAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAAAGGAGGCGTTTTCCGGCGCGATTTTAGGAGCCTTGGTCGGAATGGTCAATCTTCGGCGAAATCTTTTTGTAGTACTGGTATACCAGGGGGTTCGTCGGAGCA
TTGGAATCTCATCGTTTACGGTGGTATCTCGTTTCTTCTTACCCTACTGCTATTTCTCCCTTTTTATTTTGCATTCGATTCTATGAATCCTTCTGATTTGGTTGATGAAT
GGGTTCACTTGAGCTTAACGGAGGAGGAAGAAATTACTTCGGTGACTGCGGATAGAGATGCGGTTGATAGAACCGGACAGCTGTTGGGATTTTGTCTTTTGGGCAAGCTG
CTGTGTCATCGATCGTTGGGAGCTGAGGTTATGCGGAGGAATTTTAGGGTTGCATGGAAGGGGCCTTGGATTTTTGAAAATTTCCTTCTGGTCTTGGAGCTTCCAATTCG
TGGTCTTAAGCCATCTGATTACCAATTTTCTTCTTCGGCTTTTTGGATCCATGTGTTTGATTTGCCTCTGGACTGGTTCAATCAAAGTATGGCAGAGCAAATTGGCAATG
TCATGGGAGCTAGTCTGAGAATAAGAGTTAGAATCGACCTGTCTCGACCTCTTCGGCGTAGGATTCGTATTTATCCGGATGGTCCCCTTATTGGGTTGTGGGTTCCCTTC
AGGTATGAACGTCTTCCTGAGCTATGTTCGTTCTATGGTATTATTGGTCATGTATCGCGTGATTGTGCCCTGTCTCTTCGATCGGAATGGGGTTCTGGTTCAATCCCACA
ATATGGGGATTGGTTGCGTTTTTCAAGGAAGGGCATGATTCTGAATCACTTCACGGCAAGAGATGTTGGTCGTGCCTCTGTTCGAGAGCCGCCTCAAGGTCATCGCTTAA
CGATTGAGGTAGCTTTGATGCCGAATACCGTTGTTCCGGTAGATGAATTGCCAAGGCAGCCCCAATGTGGAATTCGAATTACGGAGCCGACTGAAGAGCAGTATCGGGGA
GGATCAGCTAAGGGGTCACCAACATTGTATTCCTTGTCCGGAGGGTCGAACGTGTCCATCAAAGGCAAAGAAAAAGTTGTTGAGGTGGCGAGCAAGTACAGGGCAGGTCT
CCCTCGATGGTTGCCGAAAAATTCTGATCGGAACAGTCTTCCAACTCCAGAAGTGACGGTGCAACGGGATCCTGTGCCAGTGACTGTTACAACAAAGGAGACAGAGAAAT
TAAAGCAAACGTTTAATGAAGGACCAAGTGATTTGCAAGGGCATTTAAGGCTCGTAACCTGCGTTTATCAGAAAATTTAA
Protein sequenceShow/hide protein sequence
MRKGGVFRRDFRSLGRNGQSSAKSFCSTGIPGGSSEHWNLIVYGGISFLLTLLLFLPFYFAFDSMNPSDLVDEWVHLSLTEEEEITSVTADRDAVDRTGQLLGFCLLGKL
LCHRSLGAEVMRRNFRVAWKGPWIFENFLLVLELPIRGLKPSDYQFSSSAFWIHVFDLPLDWFNQSMAEQIGNVMGASLRIRVRIDLSRPLRRRIRIYPDGPLIGLWVPF
RYERLPELCSFYGIIGHVSRDCALSLRSEWGSGSIPQYGDWLRFSRKGMILNHFTARDVGRASVREPPQGHRLTIEVALMPNTVVPVDELPRQPQCGIRITEPTEEQYRG
GSAKGSPTLYSLSGGSNVSIKGKEKVVEVASKYRAGLPRWLPKNSDRNSLPTPEVTVQRDPVPVTVTTKETEKLKQTFNEGPSDLQGHLRLVTCVYQKI