; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035492 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035492
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:22617642..22618340
RNA-Seq ExpressionLag0035492
SyntenyLag0035492
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.7e-6152.38Show/hide
Query:  MAVRKMFPTKSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEII
        +A+R+MFPTK+ G + + ALFYQ YW VVG K  ++ CL  LNNG  I++WN T I LIPKI  PR   D RP+SL NV+YKI++K+I NR+K V+  +I
Subjt:  MAVRKMFPTKSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEII

Query:  SPYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGL
        S  QSAF+    I+DN+I+GHECLH I + ++    + ALK+DLSKA+ RVEW YL+ I+ ++GF+  WI  I+ CIST +FS+ +N  P      SRG+
Subjt:  SPYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGL

Query:  RQGDSLSPCLFLLVAEGLSFLISKANLGGEV
        RQGD LSP LFLL AEGLS LI+  N  G +
Subjt:  RQGDSLSPCLFLLVAEGLSFLISKANLGGEV

XP_023915763.1 uncharacterized protein LOC112027315 [Quercus suber]2.0e-5749.35Show/hide
Query:  AVRKMFPTKSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEIIS
        A+R+M P K+ G +    LF+Q YW  VG   + +  L  LN+G  ++  N T I LIPK+NNP    D RP+SLYNV YKI++K IANR+K +L  IIS
Subjt:  AVRKMFPTKSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEIIS

Query:  PYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGLR
          QSAFI   LI+DNI++  E LH +K N T K+  +A+KID+SKAY RVEW +LK+I+ ++GF   W++LIM C++T  +S+L+N +PK ++  SRGLR
Subjt:  PYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGLR

Query:  QGDSLSPCLFLLVAEGLSFLISKANLGGEVN
        QGD LSP LFL  AEGL+ L+ +A   G+++
Subjt:  QGDSLSPCLFLLVAEGLSFLISKANLGGEVN

XP_030923330.1 uncharacterized protein LOC115950239 [Quercus lobata]1.8e-5849.13Show/hide
Query:  AVRKMFPTKSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEIIS
        A+ +M PTK+ G +   ALFYQ++W +VG   ++   L+ LNNG  + E N TNIVLIPK+ NP    + RP+SL NV YKI++K +ANR+K VL +IIS
Subjt:  AVRKMFPTKSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEIIS

Query:  PYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGLR
          QSAF+   LITDN+++ +E LH +   +  K+  VALK+D+SKAY RVEW +L+ I+E++GF + WI  +M+C++T  FS+L+N  P  ++  SRG+R
Subjt:  PYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGLR

Query:  QGDSLSPCLFLLVAEGLSFLISKANLGGEV
        QGD +SP LFLL AEGL+ L++KA L G +
Subjt:  QGDSLSPCLFLLVAEGLSFLISKANLGGEV

XP_030939512.1 uncharacterized protein LOC115964316 [Quercus lobata]2.0e-5749.14Show/hide
Query:  MAVRKMFPTKSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEII
        +A+ +M PTK+ G +   ALFYQR+W VVG   ++   L+ LNNG  + + N T IVLIPK+ NP +  D RP+SL NV YKI++K +ANR+K VL  II
Subjt:  MAVRKMFPTKSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEII

Query:  SPYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGL
        S  QSAF+   LITDN+++ +E LH +   +  K+  +ALK+D+SKAY RVEWP+L+ +++RLGF   WI  +M+C++T  FSVL+N  P   V+ SRG+
Subjt:  SPYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGL

Query:  RQGDSLSPCLFLLVAEGLSFLISKANLGGEVN
        RQGD LSP LFLL  EG + L+ +A  GG ++
Subjt:  RQGDSLSPCLFLLVAEGLSFLISKANLGGEVN

XP_030969743.1 uncharacterized protein LOC115990020 [Quercus lobata]1.3e-5650.87Show/hide
Query:  AVRKMFPTKSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEIIS
        A++ M P K+ G +    LFYQ YW  V S  I +  L  LN+G  ++  N T I LIPK+ NP +  + RP+SL NV YKIV+K IANR+K +L  IIS
Subjt:  AVRKMFPTKSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEIIS

Query:  PYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGLR
          QSAFI   LITDN+++  E LH +KNN T K   +ALK+D+SKAY RVEW +L+K++ +LGF   W+SLIM CI+T  +S+L+N +PK L+  +RGLR
Subjt:  PYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGLR

Query:  QGDSLSPCLFLLVAEGLSFLISKANLGGEV
        QGD LSP LFL  AEGL+ +  KA + GE+
Subjt:  QGDSLSPCLFLLVAEGLSFLISKANLGGEV

TrEMBL top hitse value%identityAlignment
A0A2N9EDY7 Reverse transcriptase domain-containing protein1.6e-5748.48Show/hide
Query:  MAVRKMFPTKSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEII
        +A+++M P K+ G +    LF+Q+YWK+VG + + +  L  LN+GR +   N T I LIPK+ NP    + RP+SL NV YK+++K IANR+KG+L  II
Subjt:  MAVRKMFPTKSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEII

Query:  SPYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGL
        S  QSAF+   LITDN+++  E LH + + +  K   +A+K+D+SKAY RVEW +L+KI+ ++GF  RW++LIMNCIST  +S+L+N +P   +  SRG+
Subjt:  SPYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGL

Query:  RQGDSLSPCLFLLVAEGLSFLISKANLGGEV
        RQGD LSP LFLL AEGL +LIS A   G +
Subjt:  RQGDSLSPCLFLLVAEGLSFLISKANLGGEV

A0A2N9FBQ4 Reverse transcriptase domain-containing protein1.6e-5749.56Show/hide
Query:  AVRKMFPTKSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEIIS
        A+++M P K+ G +    +FYQ YW ++G   +I   L  LN+G+ ++  N T + LIPK+ NP    + RP+SL NV YKI++K +ANR+K +L +I+S
Subjt:  AVRKMFPTKSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEIIS

Query:  PYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGLR
          QSAF+   LITDNI++  E LH +++ +T K   +ALK+D+SKAY RVEWPYLK ++ER+GF ++WIS+IM CIST  +S+L+N +P   +  +RGLR
Subjt:  PYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGLR

Query:  QGDSLSPCLFLLVAEGLSFLISKANLGG
        QGD LSP LFLL AEGL  LI KA L G
Subjt:  QGDSLSPCLFLLVAEGLSFLISKANLGG

A0A2N9HPU0 Uncharacterized protein7.3e-5849.35Show/hide
Query:  MAVRKMFPTKSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEII
        +A+++M P K+ G +    LF+Q YWKVVG + + +  L  LN+GR +   N T I LIPK+ NP    + RP+SL NV YK+++K IANR+KG+L  II
Subjt:  MAVRKMFPTKSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEII

Query:  SPYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGL
        S  QSAF+   LITDN+++  E LH + + +  K   +A+K+D+SKAY RVEW +L+KI+ ++GF  RW+SLIMNCIST  +S+L+N +P   +  SRG+
Subjt:  SPYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGL

Query:  RQGDSLSPCLFLLVAEGLSFLISKANLGGEV
        RQGD LSP LFLL AEGL +LIS A   G +
Subjt:  RQGDSLSPCLFLLVAEGLSFLISKANLGGEV

A0A6J1DX30 uncharacterized protein LOC1110248748.3e-6252.38Show/hide
Query:  MAVRKMFPTKSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEII
        +A+R+MFPTK+ G + + ALFYQ YW VVG K  ++ CL  LNNG  I++WN T I LIPKI  PR   D RP+SL NV+YKI++K+I NR+K V+  +I
Subjt:  MAVRKMFPTKSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEII

Query:  SPYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGL
        S  QSAF+    I+DN+I+GHECLH I + ++    + ALK+DLSKA+ RVEW YL+ I+ ++GF+  WI  I+ CIST +FS+ +N  P      SRG+
Subjt:  SPYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGL

Query:  RQGDSLSPCLFLLVAEGLSFLISKANLGGEV
        RQGD LSP LFLL AEGLS LI+  N  G +
Subjt:  RQGDSLSPCLFLLVAEGLSFLISKANLGGEV

A0A7N2LT95 Reverse transcriptase domain-containing protein8.0e-5750Show/hide
Query:  AVRKMFPTKSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEIIS
        A+ +M P K+ G +    LFYQ YW  VG   + +  L  LN+G  ++  N T I LIPK+NNP++  D RP+SL NV YKI++K IANR+K +L  IIS
Subjt:  AVRKMFPTKSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEIIS

Query:  PYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGLR
          QSAF    LITDNI++  E LH +K N T ++  +ALK+D+SKAY RVEW +L+KI+ ++GF   W++LIM CI T  +S+L+N +PK L+  SRGLR
Subjt:  PYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGLR

Query:  QGDSLSPCLFLLVAEGLSFLISKANLGGEV
        QGD LSP LFL  AEGL+ +  +A L GE+
Subjt:  QGDSLSPCLFLLVAEGLSFLISKANLGGEV

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein2.2e-1930.32Show/hide
Query:  MAVRKMFPT-KSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDS-RPVSLYNVNYKIVTKTIANRVKGVLKE
        +A+    PT KS G + + A FYQRY K      ++K    +   G     + E +I+LIPK      + ++ RP+SL N++ KI+ K +ANR++  +K+
Subjt:  MAVRKMFPT-KSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDS-RPVSLYNVNYKIVTKTIANRVKGVLKE

Query:  IISPYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSR
        +I   Q  FI       NI      +  I  NR   +N V + ID  KA+ +++ P++ K + +LG D  ++ +I         ++++N           
Subjt:  IISPYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSR

Query:  GLRQGDSLSPCLFLLVAEGLS
        G RQG  LSP LF +V E L+
Subjt:  GLRQGDSLSPCLFLLVAEGLS

P08548 LINE-1 reverse transcriptase homolog1.7e-1628.97Show/hide
Query:  KSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKI-NNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEIISPYQSAFI
        KS G + + + FYQ + K     I++     +   G     + E NI LIPK   +P  + + RP+SL N++ KI+ K + NR++  +K+II   Q  FI
Subjt:  KSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKI-NNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEIISPYQSAFI

Query:  QRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGLRQGDSLSP
          S    NI      +  I  N+   ++ + L ID  KA+  ++ P++ + ++++G +  ++ LI    S    ++++N    +      G RQG  LSP
Subjt:  QRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGLRQGDSLSP

Query:  CLFLLVAEGLSFLI
         LF +V E L+  I
Subjt:  CLFLLVAEGLSFLI

P11369 LINE-1 retrotransposable element ORF2 protein8.4e-1931.36Show/hide
Query:  AVRKMFPT-KSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPK-INNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEI
        AV    PT KS G + + A FYQ + K     I+ K   ++   G     + E  I LIPK   +P +  + RP+SL N++ KI+ K +ANR++  +K I
Subjt:  AVRKMFPT-KSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPK-INNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEI

Query:  ISPYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRG
        I P Q  FI       NI      +H I  N+   +N + + +D  KA+ +++ P++ K++ER G    ++++I    S    ++ +N +    +    G
Subjt:  ISPYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRG

Query:  LRQGDSLSPCLFLLVAEGLS
         RQG  LSP LF +V E L+
Subjt:  LRQGDSLSPCLFLLVAEGLS

P14381 Transposon TX1 uncharacterized 149 kDa protein5.4e-1830.84Show/hide
Query:  AVRKMFPTKSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEIIS
        A+R M   KS G +     F+Q +W  +G     +   E    G          + L+PK  + R   + RPVSL + +YKIV K I+ R+K VL E+I 
Subjt:  AVRKMFPTKSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEIIS

Query:  PYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGLR
        P QS  +    I DN+ L  + LH     R    +L  L +D  KA+ RV+  YL   ++   F  +++  +    ++A+  V IN      +   RG+R
Subjt:  PYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGLR

Query:  QGDSLSPCLFLLVAEGLSFLISKANLG
        QG  LS  L+ L  E    L+ K   G
Subjt:  QGDSLSPCLFLLVAEGLSFLISKANLG

P16423 Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM1.5e-0424.07Show/hide
Query:  VLIPKINNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEIISPYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYL
        V IPK    +   D RP+S+ +V  + +   +A R+   +     P Q  F+      DN  +    L   +++    R+     +D+SKA+  +    +
Subjt:  VLIPKINNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEIISPYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYL

Query:  KKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGLRQGDSLSPCLFLLVAEGL
           +   G    ++  + N       S+  +       V +RG++QGD LSP LF LV + L
Subjt:  KKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGLRQGDSLSPCLFLLVAEGL

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein1.6e-0434.52Show/hide
Query:  AVRKMFPTKSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDSRPVSLYNVNYKIVT
        AV  M   K+ G + + A F+   W VV     I    E    G  ++ +N T I LIPK+    +    RPVS   V YKI+T
Subjt:  AVRKMFPTKSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDSRPVSLYNVNYKIVT

AT4G20520.1 RNA binding;RNA-directed DNA polymerases1.6e-0933.73Show/hide
Query:  IANRVKGVLKEIISPYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWI
        +  R+K ++  +I P Q++FI   + TDNI+   E +H ++  +  K   + LK+DL KAY R+ W YL+  +   GF   W+
Subjt:  IANRVKGVLKEIISPYQSAFIQRSLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWI

ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)4.1e-0553.19Show/hide
Query:  LINRDPKRLVVSSRGLRQGDSLSPCLFLLVAEGLSFLISKANLGGEV
        +IN  P+ LV  SRGLRQGD LSP LF+L  E LS L  +A   G +
Subjt:  LINRDPKRLVVSSRGLRQGDSLSPCLFLLVAEGLSFLISKANLGGEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTAGGAAGATGTTTCCAACAAAGTCTCATGGGTCGAATGAATATCTAGCTCTGTTCTATCAAAGGTATTGGAAGGTGGTGGGCTCAAAGATTATTATTAAAGA
GTGCCTGGAGGTGTTAAATAATGGGAGAAGCATTGAGGAGTGGAATGAAACAAACATAGTACTGATACCTAAGATAAATAACCCTAGGGAGAGGGGAGATTCCAGGCCAG
TCAGTCTTTATAATGTAAATTACAAGATTGTAACAAAAACTATAGCTAACCGAGTGAAGGGAGTTCTGAAGGAAATTATTTCTCCATATCAATCTGCCTTTATTCAGAGG
AGTTTAATCACAGATAATATAATCCTAGGCCATGAGTGTCTCCATCCCATCAAGAATAACAGAACACCGAAGAGGAATTTGGTTGCTCTAAAGATTGACTTAAGTAAGGC
TTACGCTAGAGTGGAGTGGCCTTATCTTAAGAAAATTATAGAGAGGTTAGGGTTTGATTCTAGATGGATTTCCCTTATTATGAACTGCATCTCGACGGCTAAGTTTTCGG
TATTAATTAACAGGGATCCGAAGAGGTTGGTGGTGTCTAGCAGAGGTCTTCGACAAGGAGACTCGTTGTCACCTTGTCTATTTCTGTTGGTCGCTGAAGGTTTGTCATTT
CTGATTTCAAAAGCCAATTTGGGTGGGGAGGTTAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTTAGGAAGATGTTTCCAACAAAGTCTCATGGGTCGAATGAATATCTAGCTCTGTTCTATCAAAGGTATTGGAAGGTGGTGGGCTCAAAGATTATTATTAAAGA
GTGCCTGGAGGTGTTAAATAATGGGAGAAGCATTGAGGAGTGGAATGAAACAAACATAGTACTGATACCTAAGATAAATAACCCTAGGGAGAGGGGAGATTCCAGGCCAG
TCAGTCTTTATAATGTAAATTACAAGATTGTAACAAAAACTATAGCTAACCGAGTGAAGGGAGTTCTGAAGGAAATTATTTCTCCATATCAATCTGCCTTTATTCAGAGG
AGTTTAATCACAGATAATATAATCCTAGGCCATGAGTGTCTCCATCCCATCAAGAATAACAGAACACCGAAGAGGAATTTGGTTGCTCTAAAGATTGACTTAAGTAAGGC
TTACGCTAGAGTGGAGTGGCCTTATCTTAAGAAAATTATAGAGAGGTTAGGGTTTGATTCTAGATGGATTTCCCTTATTATGAACTGCATCTCGACGGCTAAGTTTTCGG
TATTAATTAACAGGGATCCGAAGAGGTTGGTGGTGTCTAGCAGAGGTCTTCGACAAGGAGACTCGTTGTCACCTTGTCTATTTCTGTTGGTCGCTGAAGGTTTGTCATTT
CTGATTTCAAAAGCCAATTTGGGTGGGGAGGTTAACTGA
Protein sequenceShow/hide protein sequence
MAVRKMFPTKSHGSNEYLALFYQRYWKVVGSKIIIKECLEVLNNGRSIEEWNETNIVLIPKINNPRERGDSRPVSLYNVNYKIVTKTIANRVKGVLKEIISPYQSAFIQR
SLITDNIILGHECLHPIKNNRTPKRNLVALKIDLSKAYARVEWPYLKKIIERLGFDSRWISLIMNCISTAKFSVLINRDPKRLVVSSRGLRQGDSLSPCLFLLVAEGLSF
LISKANLGGEVN