; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035503 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035503
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:22834966..22835731
RNA-Seq ExpressionLag0035503
SyntenyLag0035503
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145148.1 uncharacterized protein LOC111014662 [Momordica charantia]5.3e-5058.79Show/hide
Query:  FSYVGKEILIKSVAQAIPNYAMSCF---------------IFWWGASEAEKKIHWQSWKKLSIHKHLSGMGFRDLSLFNQAMLAKQCWRLVKRPNSLVAR
        FS  GKE+LIK+VAQAIPNY+MSCF                FWWG+++ EKKIHW SWK+L + K   G+GF+DL +FNQAMLAKQ W+++K PNSL+ R
Subjt:  FSYVGKEILIKSVAQAIPNYAMSCF---------------IFWWGASEAEKKIHWQSWKKLSIHKHLSGMGFRDLSLFNQAMLAKQCWRLVKRPNSLVAR

Query:  VLRGRYYKTGNFMKATLGSNPSFTWRSILWGRDLFKHGYRWRIGD-VQMVDLDDPWIPKEGSPKP
        VLRG+Y+K GNFM A LGSNPSF WRSILWG++LF  G RWRIG+   ++   DPWI +EGS  P
Subjt:  VLRGRYYKTGNFMKATLGSNPSFTWRSILWGRDLFKHGYRWRIGD-VQMVDLDDPWIPKEGSPKP

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]4.6e-5447.19Show/hide
Query:  FSYVGKEILIKSVAQAIPNYAMSCF---------------IFWWGASEAEKKIHWQSWKKLSIHKHLSGMGFRDLSLFNQAMLAKQCWRLVKRPNSLVAR
        FS  GKE+LIK+VAQAIP Y MSCF                FWWG+S+ +KKIHW +W  L + K   GMGFRDL LFN+A+LAKQCWR++  PNS+++R
Subjt:  FSYVGKEILIKSVAQAIPNYAMSCF---------------IFWWGASEAEKKIHWQSWKKLSIHKHLSGMGFRDLSLFNQAMLAKQCWRLVKRPNSLVAR

Query:  VLRGRYYKTGNFMKATLGSNPSFTWRSILWGRDLFKHGYRWRIGDVQMVDL-DDPWIPKEGSPKPIIIHPNMSRLT-VAHLKD-SFGMWNENLICASFLE
        VL+GRY+K  +FM+A +  NPS+ WRSILWGRDL K G RWRIG+   V +  D W+P + + K I+  P +  ++ V+ L D   G W  +++   F  
Subjt:  VLRGRYYKTGNFMKATLGSNPSFTWRSILWGRDLFKHGYRWRIGDVQMVDL-DDPWIPKEGSPKPIIIHPNMSRLT-VAHLKD-SFGMWNENLICASFLE

Query:  TDANAILNVPTRRNMGEDEIIWNYDPKGIFS
         +A  IL++P  R   ED +IWNY+  G++S
Subjt:  TDANAILNVPTRRNMGEDEIIWNYDPKGIFS

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]1.2e-6551.53Show/hide
Query:  FSYVGKEILIKSVAQAIPNYAMSCF---------------IFWWGASEAEKKIHWQSWKKLSIHKHLSGMGFRDLSLFNQAMLAKQCWRLVKRPNSLVAR
        FS  GKE+LIK+VAQAIPNY +SCF                FWWG+S  ++KIHWQSWK L I K L GMGFRD+S+FNQAMLAKQ WR+++ P+SL+A+
Subjt:  FSYVGKEILIKSVAQAIPNYAMSCF---------------IFWWGASEAEKKIHWQSWKKLSIHKHLSGMGFRDLSLFNQAMLAKQCWRLVKRPNSLVAR

Query:  VLRGRYYKTGNFMKATLGSNPSFTWRSILWGRDLFKHGYRWRIGDVQMVDL-DDPWIPKEGSPKPIIIHPNMSRLTVAHLKDSFGMWNENLICASFLETD
         LRG+Y+KTG+F++A LG+ PS+ WRSILWGRDLFK GYRW++G+   ++L  DPW+P++G+  P+  H ++   +VA L +  G W+E  +  SF+ ++
Subjt:  VLRGRYYKTGNFMKATLGSNPSFTWRSILWGRDLFKHGYRWRIGDVQMVDL-DDPWIPKEGSPKPIIIHPNMSRLTVAHLKDSFGMWNENLICASFLETD

Query:  ANAILNVPTRRNMGEDEIIWNYDPKGIFS
        A+ IL  P      +DEIIW  D  GIFS
Subjt:  ANAILNVPTRRNMGEDEIIWNYDPKGIFS

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]5.1e-5348.47Show/hide
Query:  FSYVGKEILIKSVAQAIPNYAMSCF---------------IFWWGASEAEKKIHWQSWKKLSIHKHLSGMGFRDLSLFNQAMLAKQCWRLVKRPNSLVAR
        F+  GKE+LIK+VAQAIP YAMS F                FWWG  +  K IHW  W+++S  K   GMGFRDLS FNQA++AKQ WR+++ P+SLVAR
Subjt:  FSYVGKEILIKSVAQAIPNYAMSCF---------------IFWWGASEAEKKIHWQSWKKLSIHKHLSGMGFRDLSLFNQAMLAKQCWRLVKRPNSLVAR

Query:  VLRGRYYKTGNFMKATLGSNPSFTWRSILWGRDLFKHGYRWRIGDVQMVDL-DDPWIPKEGSPKPIIIHPNMSRLTVAHLKDSFGMWNENLICASFLETD
        VL+ RY+K   FM A LGS PSF WRSI+WGR +   G RWRIG+ Q V +  + WIP+  + KPI      +  TVA L D    W E+LI   F   D
Subjt:  VLRGRYYKTGNFMKATLGSNPSFTWRSILWGRDLFKHGYRWRIGDVQMVDL-DDPWIPKEGSPKPIIIHPNMSRLTVAHLKDSFGMWNENLICASFLETD

Query:  ANAILNVPTRRNMGEDEIIWNYDPKGIFS
        A AI+ +P  +   ED++IW+YD KG +S
Subjt:  ANAILNVPTRRNMGEDEIIWNYDPKGIFS

XP_024043257.1 uncharacterized protein LOC112099952 [Citrus clementina]1.7e-5147.16Show/hide
Query:  FSYVGKEILIKSVAQAIPNYAMSCF---------------IFWWGASEAEKKIHWQSWKKLSIHKHLSGMGFRDLSLFNQAMLAKQCWRLVKRPNSLVAR
        FS  GKE+LIK VAQAIP+YAMS F                FWWG    +K I+W  W+++S  K   G+GFRDLS FNQA++AKQ WR+++ PNSLVA+
Subjt:  FSYVGKEILIKSVAQAIPNYAMSCF---------------IFWWGASEAEKKIHWQSWKKLSIHKHLSGMGFRDLSLFNQAMLAKQCWRLVKRPNSLVAR

Query:  VLRGRYYKTGNFMKATLGSNPSFTWRSILWGRDLFKHGYRWRIGDVQMVDL-DDPWIPKEGSPKPIIIHPNMSRLTVAHLKDSFGMWNENLICASFLETD
        VL+ RY+K G  M A LGS PSF WRS+LWGR + + G RWRIG+ + V +    WIP   + +PI         TVA L DS   W E LIC  F   D
Subjt:  VLRGRYYKTGNFMKATLGSNPSFTWRSILWGRDLFKHGYRWRIGDVQMVDL-DDPWIPKEGSPKPIIIHPNMSRLTVAHLKDSFGMWNENLICASFLETD

Query:  ANAILNVPTRRNMGEDEIIWNYDPKGIFS
        A AI  +   R   +D++IW+YD +G +S
Subjt:  ANAILNVPTRRNMGEDEIIWNYDPKGIFS

TrEMBL top hitse value%identityAlignment
A0A6J1CV63 uncharacterized protein LOC1110146622.6e-5058.79Show/hide
Query:  FSYVGKEILIKSVAQAIPNYAMSCF---------------IFWWGASEAEKKIHWQSWKKLSIHKHLSGMGFRDLSLFNQAMLAKQCWRLVKRPNSLVAR
        FS  GKE+LIK+VAQAIPNY+MSCF                FWWG+++ EKKIHW SWK+L + K   G+GF+DL +FNQAMLAKQ W+++K PNSL+ R
Subjt:  FSYVGKEILIKSVAQAIPNYAMSCF---------------IFWWGASEAEKKIHWQSWKKLSIHKHLSGMGFRDLSLFNQAMLAKQCWRLVKRPNSLVAR

Query:  VLRGRYYKTGNFMKATLGSNPSFTWRSILWGRDLFKHGYRWRIGD-VQMVDLDDPWIPKEGSPKP
        VLRG+Y+K GNFM A LGSNPSF WRSILWG++LF  G RWRIG+   ++   DPWI +EGS  P
Subjt:  VLRGRYYKTGNFMKATLGSNPSFTWRSILWGRDLFKHGYRWRIGD-VQMVDLDDPWIPKEGSPKP

A0A6J1DAR4 uncharacterized protein LOC1110189542.3e-5447.19Show/hide
Query:  FSYVGKEILIKSVAQAIPNYAMSCF---------------IFWWGASEAEKKIHWQSWKKLSIHKHLSGMGFRDLSLFNQAMLAKQCWRLVKRPNSLVAR
        FS  GKE+LIK+VAQAIP Y MSCF                FWWG+S+ +KKIHW +W  L + K   GMGFRDL LFN+A+LAKQCWR++  PNS+++R
Subjt:  FSYVGKEILIKSVAQAIPNYAMSCF---------------IFWWGASEAEKKIHWQSWKKLSIHKHLSGMGFRDLSLFNQAMLAKQCWRLVKRPNSLVAR

Query:  VLRGRYYKTGNFMKATLGSNPSFTWRSILWGRDLFKHGYRWRIGDVQMVDL-DDPWIPKEGSPKPIIIHPNMSRLT-VAHLKD-SFGMWNENLICASFLE
        VL+GRY+K  +FM+A +  NPS+ WRSILWGRDL K G RWRIG+   V +  D W+P + + K I+  P +  ++ V+ L D   G W  +++   F  
Subjt:  VLRGRYYKTGNFMKATLGSNPSFTWRSILWGRDLFKHGYRWRIGDVQMVDL-DDPWIPKEGSPKPIIIHPNMSRLT-VAHLKD-SFGMWNENLICASFLE

Query:  TDANAILNVPTRRNMGEDEIIWNYDPKGIFS
         +A  IL++P  R   ED +IWNY+  G++S
Subjt:  TDANAILNVPTRRNMGEDEIIWNYDPKGIFS

A0A6J1DRA0 uncharacterized protein LOC1110224235.7e-6651.53Show/hide
Query:  FSYVGKEILIKSVAQAIPNYAMSCF---------------IFWWGASEAEKKIHWQSWKKLSIHKHLSGMGFRDLSLFNQAMLAKQCWRLVKRPNSLVAR
        FS  GKE+LIK+VAQAIPNY +SCF                FWWG+S  ++KIHWQSWK L I K L GMGFRD+S+FNQAMLAKQ WR+++ P+SL+A+
Subjt:  FSYVGKEILIKSVAQAIPNYAMSCF---------------IFWWGASEAEKKIHWQSWKKLSIHKHLSGMGFRDLSLFNQAMLAKQCWRLVKRPNSLVAR

Query:  VLRGRYYKTGNFMKATLGSNPSFTWRSILWGRDLFKHGYRWRIGDVQMVDL-DDPWIPKEGSPKPIIIHPNMSRLTVAHLKDSFGMWNENLICASFLETD
         LRG+Y+KTG+F++A LG+ PS+ WRSILWGRDLFK GYRW++G+   ++L  DPW+P++G+  P+  H ++   +VA L +  G W+E  +  SF+ ++
Subjt:  VLRGRYYKTGNFMKATLGSNPSFTWRSILWGRDLFKHGYRWRIGDVQMVDL-DDPWIPKEGSPKPIIIHPNMSRLTVAHLKDSFGMWNENLICASFLETD

Query:  ANAILNVPTRRNMGEDEIIWNYDPKGIFS
        A+ IL  P      +DEIIW  D  GIFS
Subjt:  ANAILNVPTRRNMGEDEIIWNYDPKGIFS

A0A803PM68 Uncharacterized protein4.4e-5042.13Show/hide
Query:  TRRRFSITLKIEFGKRSKDGNGS-FSYVGKEILIKSVAQAIPNYAMSCF---------------IFWWGASEAEKKIHWQSWKKLSIHKHLSGMGFRDLS
        T+++    +K +   + K   GS FS  GKEILIK++ QAIP Y MSCF                FWWG+SE + KIHW  W  L  HK   G+GFRDL 
Subjt:  TRRRFSITLKIEFGKRSKDGNGS-FSYVGKEILIKSVAQAIPNYAMSCF---------------IFWWGASEAEKKIHWQSWKKLSIHKHLSGMGFRDLS

Query:  LFNQAMLAKQCWRLVKRPNSLVARVLRGRYYKTGNFMKATLGSNPSFTWRSILWGRDLFKHGYRWRIGDVQMVD-LDDPWIPKEGSPKPIIIHPNMSR-L
        LFNQA+LAKQ WR ++ PNSL ++VL+  Y+     ++A  G++ SF WRS++WG+ + + GYRWRIG+   V  L+DPW+P+  + K +   P++   +
Subjt:  LFNQAMLAKQCWRLVKRPNSLVARVLRGRYYKTGNFMKATLGSNPSFTWRSILWGRDLFKHGYRWRIGDVQMVD-LDDPWIPKEGSPKPIIIHPNMSR-L

Query:  TVAHLKDSFGMWNENLICASFLETDANAILNVPTRRNMGEDEIIWNYDPKGIFS
         V  L    G W+E  I A F  TDA  IL +PT     ED+I+W+Y   G +S
Subjt:  TVAHLKDSFGMWNENLICASFLETDANAILNVPTRRNMGEDEIIWNYDPKGIFS

A0A803PV25 Uncharacterized protein1.2e-5044.98Show/hide
Query:  FSYVGKEILIKSVAQAIPNYAMSCF---------------IFWWGASEAEKKIHWQSWKKLSIHKHLSGMGFRDLSLFNQAMLAKQCWRLVKRPNSLVAR
        FS  GKE+LIK++ QAIP Y MSCF                FWWG+SE + KIHW  W  L  HK   G+GFRDL LFNQA+LAKQ WR ++ PNSL ++
Subjt:  FSYVGKEILIKSVAQAIPNYAMSCF---------------IFWWGASEAEKKIHWQSWKKLSIHKHLSGMGFRDLSLFNQAMLAKQCWRLVKRPNSLVAR

Query:  VLRGRYYKTGNFMKATLGSNPSFTWRSILWGRDLFKHGYRWRIGDVQMVD-LDDPWIPKEGSPKPIIIHPNMSRLTVAHLKDSFGMWNENLICASFLETD
        VL+  YY     ++A  G++ SF WRS++WG+ + + GYRWRIG+   V  LDDPW+P+  + K     P    L V  LK   G W+E  + A F  TD
Subjt:  VLRGRYYKTGNFMKATLGSNPSFTWRSILWGRDLFKHGYRWRIGDVQMVD-LDDPWIPKEGSPKPIIIHPNMSRLTVAHLKDSFGMWNENLICASFLETD

Query:  ANAILNVPTRRNMGEDEIIWNYDPKGIFS
        A  IL + T     ED+I+W+Y   G +S
Subjt:  ANAILNVPTRRNMGEDEIIWNYDPKGIFS

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003102.8e-2540.13Show/hide
Query:  AIPNYAMSCF---------------IFWWGASEAEKKIHWQSWKKLSIHKH-LSGMGFRDLSLFNQAMLAKQCWRLVKRPNSLVARVLRGRYYKTGNFMK
        A+P YAMSCF                FWW + E ++KI W +W+KL   K    G+GFRDL  FNQA+LAKQ +R++ +P++L++R+LR RY+   + M+
Subjt:  AIPNYAMSCF---------------IFWWGASEAEKKIHWQSWKKLSIHKH-LSGMGFRDLSLFNQAMLAKQCWRLVKRPNSLVARVLRGRYYKTGNFMK

Query:  ATLGSNPSFTWRSILWGRDLFKHGYRWRIGD-VQMVDLDDPWIPKEGSPKPI
         ++G+ PS+ WRSI+ GR+L   G    IGD +      D WI  E    P+
Subjt:  ATLGSNPSFTWRSILWGRDLFKHGYRWRIGD-VQMVDLDDPWIPKEGSPKPI

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein6.1e-2830.53Show/hide
Query:  AIPNYAMSCFI---------------FWWGASEAEKKIHWQSWKKLSIHKHLSGMGFRDLSLFNQAMLAKQCWRLVKRPNSLVARVLRGRYYKTGNFMKA
        A+P Y M+CF+               FWW   +  K +HW++W  LS +K   G+GF+D+  FN A+L KQ WR++ RP SL+A+V + RY+   + + A
Subjt:  AIPNYAMSCFI---------------FWWGASEAEKKIHWQSWKKLSIHKHLSGMGFRDLSLFNQAMLAKQCWRLVKRPNSLVARVLRGRYYKTGNFMKA

Query:  TLGSNPSFTWRSILWGRDLFKHGYRWRIGDVQMVDLDDPWIPKEGSPKPIIIHPNMSR------------LTVAHLKDSFGM-WNENLICASFLETDANA
         LGS PSF W+SI   +++ + G R  +G+ + + +   W  K    KP      M R            L V+ L D  G  W +++I   F E +   
Subjt:  TLGSNPSFTWRSILWGRDLFKHGYRWRIGDVQMVDLDDPWIPKEGSPKPIIIHPNMSR------------LTVAHLKDSFGM-WNENLICASFLETDANA

Query:  ILNVPTRRNMGEDEIIWNYDPKGIFS
        I  +        D   W+Y   G ++
Subjt:  ILNVPTRRNMGEDEIIWNYDPKGIFS

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.0e-2640.13Show/hide
Query:  AIPNYAMSCF---------------IFWWGASEAEKKIHWQSWKKLSIHKH-LSGMGFRDLSLFNQAMLAKQCWRLVKRPNSLVARVLRGRYYKTGNFMK
        A+P YAMSCF                FWW + E ++KI W +W+KL   K    G+GFRDL  FNQA+LAKQ +R++ +P++L++R+LR RY+   + M+
Subjt:  AIPNYAMSCF---------------IFWWGASEAEKKIHWQSWKKLSIHKH-LSGMGFRDLSLFNQAMLAKQCWRLVKRPNSLVARVLRGRYYKTGNFMK

Query:  ATLGSNPSFTWRSILWGRDLFKHGYRWRIGD-VQMVDLDDPWIPKEGSPKPI
         ++G+ PS+ WRSI+ GR+L   G    IGD +      D WI  E    P+
Subjt:  ATLGSNPSFTWRSILWGRDLFKHGYRWRIGD-VQMVDLDDPWIPKEGSPKPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGGAACAAGAAGGAGATTTTCAATAACATTAAAGATCGAGTTTGGAAAGCGCTCCAAGGATGGAAATGGAAGTTTTTCTTATGTCGGAAAGGAAATTCTTATTAA
ATCAGTGGCTCAAGCTATTCCTAATTATGCGATGAGTTGTTTTATATTTTGGTGGGGAGCTTCAGAGGCGGAAAAGAAAATCCATTGGCAAAGTTGGAAGAAACTTTCTA
TCCATAAGCACCTTAGTGGAATGGGCTTTCGAGACTTGTCACTATTCAATCAAGCAATGTTAGCTAAGCAATGTTGGAGACTTGTAAAACGCCCTAATAGCTTGGTTGCA
AGGGTTTTGCGCGGGCGGTACTACAAAACTGGAAACTTTATGAAAGCTACATTGGGATCCAATCCTTCCTTTACGTGGAGAAGTATTTTATGGGGGAGGGATCTTTTTAA
GCATGGCTACCGTTGGAGAATTGGAGATGTCCAAATGGTTGATTTGGATGACCCATGGATACCAAAGGAAGGTTCACCAAAGCCAATTATCATTCACCCCAATATGAGTC
GACTAACAGTAGCCCATCTTAAAGATTCTTTCGGCATGTGGAATGAAAATTTGATTTGTGCTTCATTCCTGGAGACAGACGCGAATGCTATTTTGAATGTTCCGACTAGA
CGAAATATGGGAGAAGATGAAATTATATGGAATTATGACCCTAAAGGAATCTTCTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGAGGAACAAGAAGGAGATTTTCAATAACATTAAAGATCGAGTTTGGAAAGCGCTCCAAGGATGGAAATGGAAGTTTTTCTTATGTCGGAAAGGAAATTCTTATTAA
ATCAGTGGCTCAAGCTATTCCTAATTATGCGATGAGTTGTTTTATATTTTGGTGGGGAGCTTCAGAGGCGGAAAAGAAAATCCATTGGCAAAGTTGGAAGAAACTTTCTA
TCCATAAGCACCTTAGTGGAATGGGCTTTCGAGACTTGTCACTATTCAATCAAGCAATGTTAGCTAAGCAATGTTGGAGACTTGTAAAACGCCCTAATAGCTTGGTTGCA
AGGGTTTTGCGCGGGCGGTACTACAAAACTGGAAACTTTATGAAAGCTACATTGGGATCCAATCCTTCCTTTACGTGGAGAAGTATTTTATGGGGGAGGGATCTTTTTAA
GCATGGCTACCGTTGGAGAATTGGAGATGTCCAAATGGTTGATTTGGATGACCCATGGATACCAAAGGAAGGTTCACCAAAGCCAATTATCATTCACCCCAATATGAGTC
GACTAACAGTAGCCCATCTTAAAGATTCTTTCGGCATGTGGAATGAAAATTTGATTTGTGCTTCATTCCTGGAGACAGACGCGAATGCTATTTTGAATGTTCCGACTAGA
CGAAATATGGGAGAAGATGAAATTATATGGAATTATGACCCTAAAGGAATCTTCTCGTGA
Protein sequenceShow/hide protein sequence
MRGTRRRFSITLKIEFGKRSKDGNGSFSYVGKEILIKSVAQAIPNYAMSCFIFWWGASEAEKKIHWQSWKKLSIHKHLSGMGFRDLSLFNQAMLAKQCWRLVKRPNSLVA
RVLRGRYYKTGNFMKATLGSNPSFTWRSILWGRDLFKHGYRWRIGDVQMVDLDDPWIPKEGSPKPIIIHPNMSRLTVAHLKDSFGMWNENLICASFLETDANAILNVPTR
RNMGEDEIIWNYDPKGIFS