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Lag0035508 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035508
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr3:22917966..22918598
RNA-Seq ExpressionLag0035508
SyntenyLag0035508
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015383577.1 uncharacterized protein LOC107176071 [Citrus sinensis]8.6e-2037.91Show/hide
Query:  MKAEVSQKFKIPTFNPYDGKKDPIQHIDAYKNSMDFHDVSDA-------------------------ISYFKEFARAFLSQFMGAREQRKPHINLLTVKQ
        M+A     F++P+  PYDG+KDP++H++ Y++ M+   VS A                         IS F E  R F   F  AR++ KP   LLTVKQ
Subjt:  MKAEVSQKFKIPTFNPYDGKKDPIQHIDAYKNSMDFHDVSDA-------------------------ISYFKEFARAFLSQFMGAREQRKPHINLLTVKQ

Query:  QPGESLRDYITRFNEEALQVEGYSDGTTLA--EFVSRAQKYMSAEELLRSKKSEQ--EHKRHSSFDQDRKREKRQRTDDGDR
          GESLR+YI R+N E  QV+GY DG TL   + +SRA+KY +AEE  +SKK  +  E  ++    +DR+  +  R D   R
Subjt:  QPGESLRDYITRFNEEALQVEGYSDGTTLA--EFVSRAQKYMSAEELLRSKKSEQ--EHKRHSSFDQDRKREKRQRTDDGDR

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]2.1e-1836.45Show/hide
Query:  MKAEVSQKFKIPTFNPYDGKKDPIQHIDAYKNSMDFHDVSDA-------------------------ISYFKEFARAFLSQFMGAREQRKPHINLLTVKQ
        MK +V  KFK+PT   +DG  D + H+DAY+  MD + VS+A                         IS FK  A+AF++QF+G R + +P   LLT+KQ
Subjt:  MKAEVSQKFKIPTFNPYDGKKDPIQHIDAYKNSMDFHDVSDA-------------------------ISYFKEFARAFLSQFMGAREQRKPHINLLTVKQ

Query:  QPGESLRDYITRFNEEALQVEGYSDG------------------------TTLAEFVSRAQKYMSAEELLRSKK------SEQEHKRHSSFDQDRKREKR
        +  ESL DY+ RFNEE LQVEG ++                         +T +E +SRAQKYMSA E   SK+      S+Q  +R     Q  + EKR
Subjt:  QPGESLRDYITRFNEEALQVEGYSDG------------------------TTLAEFVSRAQKYMSAEELLRSKK------SEQEHKRHSSFDQDRKREKR

Query:  QRT
         R+
Subjt:  QRT

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]1.7e-2036.67Show/hide
Query:  MKAEVSQKFKIPTFNPYDGKKDPIQHIDAYKNSMDFHDVSDA-------------------------ISYFKEFARAFLSQFMGAREQRKPHINLLTVKQ
        MK +   KFK+P    YDG  DPI H+DAY+   D +D+ +A                         IS FKE A AF++QF+G R + KP   LLT+KQ
Subjt:  MKAEVSQKFKIPTFNPYDGKKDPIQHIDAYKNSMDFHDVSDA-------------------------ISYFKEFARAFLSQFMGAREQRKPHINLLTVKQ

Query:  QPGESLRDYITRFNEEALQVEGYSDGTTLAEFV------------------------SRAQKYMSAEELLRSKKSEQEHKRHSSFDQDRKREKRQRTDDG
        +  ESL++Y+ RFNEE LQVEG +D   L  FV                        SRAQKYMSA EL+   +  +  + + S  ++R+ EKR R+   
Subjt:  QPGESLRDYITRFNEEALQVEGYSDGTTLAEFV------------------------SRAQKYMSAEELLRSKKSEQEHKRHSSFDQDRKREKRQRTDDG

Query:  DRGRADNDHG
           R+D+ HG
Subjt:  DRGRADNDHG

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]3.6e-1835.71Show/hide
Query:  MKAEVSQKFKIPTFNPYDGKKDPIQHIDAYKNSMDFHDVSDA-------------------------ISYFKEFARAFLSQFMGAREQRKPHINLLTVKQ
        M+ +V  KFK+PT   +D   DP+ H+DAY+  MD + VS+A                         IS FK  ARAF++QF+G R + +P   LLT+KQ
Subjt:  MKAEVSQKFKIPTFNPYDGKKDPIQHIDAYKNSMDFHDVSDA-------------------------ISYFKEFARAFLSQFMGAREQRKPHINLLTVKQ

Query:  QPGESLRDYITRFNEEALQVEGYSDG------------------------TTLAEFVSRAQKYMSAEELLRS------KKSEQEHKRHSSFDQDRKREKR
        +  ESLRDY+ RFNEE LQVEG +D                          T +E +SRAQ+YMSA E   S      K+++ + +R     Q  + EKR
Subjt:  QPGESLRDYITRFNEEALQVEGYSDG------------------------TTLAEFVSRAQKYMSAEELLRS------KKSEQEHKRHSSFDQDRKREKR

Query:  QRTDDGDRGR
         R+   D  R
Subjt:  QRTDDGDRGR

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]6.6e-2036.19Show/hide
Query:  MKAEVSQKFKIPTFNPYDGKKDPIQHIDAYKNSMDFHDVSDA-------------------------ISYFKEFARAFLSQFMGAREQRKPHINLLTVKQ
        M+ +V  KFK+PT  P+DG  +P+ H+DAY+  MD + VSDA                         IS FK  ARAF++QF+G R + +P   LLT+KQ
Subjt:  MKAEVSQKFKIPTFNPYDGKKDPIQHIDAYKNSMDFHDVSDA-------------------------ISYFKEFARAFLSQFMGAREQRKPHINLLTVKQ

Query:  QPGESLRDYITRFNEEALQVEGYSDG------------------------TTLAEFVSRAQKYMSAEELLRS------KKSEQEHKRHSSFDQDRKREKR
        +  ESL DY+ RFNEE LQ+EG +D                         +T +E +SRAQ+YMSA E   S      K+++Q+ +R     Q  + EKR
Subjt:  QPGESLRDYITRFNEEALQVEGYSDG------------------------TTLAEFVSRAQKYMSAEELLRS------KKSEQEHKRHSSFDQDRKREKR

Query:  QRTDDGDRGR
         R    D  R
Subjt:  QRTDDGDRGR

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166191.5e-1735.27Show/hide
Query:  MKAEVSQKFKIPTFNPYDGKKDPIQHIDAYKNSMDFHDVSDA-------------------------ISYFKEFARAFLSQFMGAREQRKPHINLLTVKQ
        MK +V  KFK+P    YDG  DPI H+D Y    D + +++A                         IS FKE ARAF++QF G   + +P   LLT+KQ
Subjt:  MKAEVSQKFKIPTFNPYDGKKDPIQHIDAYKNSMDFHDVSDA-------------------------ISYFKEFARAFLSQFMGAREQRKPHINLLTVKQ

Query:  QPGESLRDYITRFNEEALQVEGYSDGTTLAEFV------------------------SRAQKYMSAEELLRSKKSEQEHKRHSSFDQDRKR--EKR----
        +  ESL+DY+ RFN+E LQVEG +D   L  F+                        SRAQ YMS  EL+ SK+  +   +++ ++  RKR  EKR    
Subjt:  QPGESLRDYITRFNEEALQVEGYSDGTTLAEFV------------------------SRAQKYMSAEELLRSKKSEQEHKRHSSFDQDRKR--EKR----

Query:  -QRTDDG
         +R+D G
Subjt:  -QRTDDG

A0A6J1D7D2 uncharacterized protein LOC1110183071.0e-1836.45Show/hide
Query:  MKAEVSQKFKIPTFNPYDGKKDPIQHIDAYKNSMDFHDVSDA-------------------------ISYFKEFARAFLSQFMGAREQRKPHINLLTVKQ
        MK +V  KFK+PT   +DG  D + H+DAY+  MD + VS+A                         IS FK  A+AF++QF+G R + +P   LLT+KQ
Subjt:  MKAEVSQKFKIPTFNPYDGKKDPIQHIDAYKNSMDFHDVSDA-------------------------ISYFKEFARAFLSQFMGAREQRKPHINLLTVKQ

Query:  QPGESLRDYITRFNEEALQVEGYSDG------------------------TTLAEFVSRAQKYMSAEELLRSKK------SEQEHKRHSSFDQDRKREKR
        +  ESL DY+ RFNEE LQVEG ++                         +T +E +SRAQKYMSA E   SK+      S+Q  +R     Q  + EKR
Subjt:  QPGESLRDYITRFNEEALQVEGYSDG------------------------TTLAEFVSRAQKYMSAEELLRSKK------SEQEHKRHSSFDQDRKREKR

Query:  QRT
         R+
Subjt:  QRT

A0A6J1DWY0 uncharacterized protein LOC1110252931.8e-1835.71Show/hide
Query:  MKAEVSQKFKIPTFNPYDGKKDPIQHIDAYKNSMDFHDVSDA-------------------------ISYFKEFARAFLSQFMGAREQRKPHINLLTVKQ
        M+ +V  KFK+PT   +D   DP+ H+DAY+  MD + VS+A                         IS FK  ARAF++QF+G R + +P   LLT+KQ
Subjt:  MKAEVSQKFKIPTFNPYDGKKDPIQHIDAYKNSMDFHDVSDA-------------------------ISYFKEFARAFLSQFMGAREQRKPHINLLTVKQ

Query:  QPGESLRDYITRFNEEALQVEGYSDG------------------------TTLAEFVSRAQKYMSAEELLRS------KKSEQEHKRHSSFDQDRKREKR
        +  ESLRDY+ RFNEE LQVEG +D                          T +E +SRAQ+YMSA E   S      K+++ + +R     Q  + EKR
Subjt:  QPGESLRDYITRFNEEALQVEGYSDG------------------------TTLAEFVSRAQKYMSAEELLRS------KKSEQEHKRHSSFDQDRKREKR

Query:  QRTDDGDRGR
         R+   D  R
Subjt:  QRTDDGDRGR

A0A6J1DZ49 uncharacterized protein LOC1110248518.4e-2136.67Show/hide
Query:  MKAEVSQKFKIPTFNPYDGKKDPIQHIDAYKNSMDFHDVSDA-------------------------ISYFKEFARAFLSQFMGAREQRKPHINLLTVKQ
        MK +   KFK+P    YDG  DPI H+DAY+   D +D+ +A                         IS FKE A AF++QF+G R + KP   LLT+KQ
Subjt:  MKAEVSQKFKIPTFNPYDGKKDPIQHIDAYKNSMDFHDVSDA-------------------------ISYFKEFARAFLSQFMGAREQRKPHINLLTVKQ

Query:  QPGESLRDYITRFNEEALQVEGYSDGTTLAEFV------------------------SRAQKYMSAEELLRSKKSEQEHKRHSSFDQDRKREKRQRTDDG
        +  ESL++Y+ RFNEE LQVEG +D   L  FV                        SRAQKYMSA EL+   +  +  + + S  ++R+ EKR R+   
Subjt:  QPGESLRDYITRFNEEALQVEGYSDGTTLAEFV------------------------SRAQKYMSAEELLRSKKSEQEHKRHSSFDQDRKREKRQRTDDG

Query:  DRGRADNDHG
           R+D+ HG
Subjt:  DRGRADNDHG

A0A6J1E1E7 uncharacterized protein LOC1110255483.2e-2036.19Show/hide
Query:  MKAEVSQKFKIPTFNPYDGKKDPIQHIDAYKNSMDFHDVSDA-------------------------ISYFKEFARAFLSQFMGAREQRKPHINLLTVKQ
        M+ +V  KFK+PT  P+DG  +P+ H+DAY+  MD + VSDA                         IS FK  ARAF++QF+G R + +P   LLT+KQ
Subjt:  MKAEVSQKFKIPTFNPYDGKKDPIQHIDAYKNSMDFHDVSDA-------------------------ISYFKEFARAFLSQFMGAREQRKPHINLLTVKQ

Query:  QPGESLRDYITRFNEEALQVEGYSDG------------------------TTLAEFVSRAQKYMSAEELLRS------KKSEQEHKRHSSFDQDRKREKR
        +  ESL DY+ RFNEE LQ+EG +D                         +T +E +SRAQ+YMSA E   S      K+++Q+ +R     Q  + EKR
Subjt:  QPGESLRDYITRFNEEALQVEGYSDG------------------------TTLAEFVSRAQKYMSAEELLRS------KKSEQEHKRHSSFDQDRKREKR

Query:  QRTDDGDRGR
         R    D  R
Subjt:  QRTDDGDRGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCCGAAGTGTCCCAGAAGTTCAAGATACCCACGTTCAACCCATATGATGGCAAGAAGGACCCCATACAACACATAGACGCCTACAAGAACTCGATGGACTTCCA
CGACGTCTCAGATGCGATCAGCTATTTCAAGGAATTTGCCCGAGCATTCCTCTCACAATTCATGGGAGCTAGAGAACAACGCAAGCCTCACATCAACCTCCTAACTGTCA
AGCAACAGCCAGGTGAGAGTCTGCGTGACTATATAACTCGTTTTAATGAGGAAGCACTTCAGGTAGAAGGATACAGTGATGGAACAACCCTGGCTGAGTTTGTTTCCAGG
GCCCAGAAGTACATGAGTGCAGAAGAGTTGTTGAGATCAAAGAAGTCAGAACAAGAGCACAAGAGGCATTCTTCATTCGATCAGGACAGGAAAAGGGAAAAAAGACAGCG
AACAGATGATGGCGACCGAGGTCGAGCCGACAATGACCATGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCCGAAGTGTCCCAGAAGTTCAAGATACCCACGTTCAACCCATATGATGGCAAGAAGGACCCCATACAACACATAGACGCCTACAAGAACTCGATGGACTTCCA
CGACGTCTCAGATGCGATCAGCTATTTCAAGGAATTTGCCCGAGCATTCCTCTCACAATTCATGGGAGCTAGAGAACAACGCAAGCCTCACATCAACCTCCTAACTGTCA
AGCAACAGCCAGGTGAGAGTCTGCGTGACTATATAACTCGTTTTAATGAGGAAGCACTTCAGGTAGAAGGATACAGTGATGGAACAACCCTGGCTGAGTTTGTTTCCAGG
GCCCAGAAGTACATGAGTGCAGAAGAGTTGTTGAGATCAAAGAAGTCAGAACAAGAGCACAAGAGGCATTCTTCATTCGATCAGGACAGGAAAAGGGAAAAAAGACAGCG
AACAGATGATGGCGACCGAGGTCGAGCCGACAATGACCATGGCTGA
Protein sequenceShow/hide protein sequence
MKAEVSQKFKIPTFNPYDGKKDPIQHIDAYKNSMDFHDVSDAISYFKEFARAFLSQFMGAREQRKPHINLLTVKQQPGESLRDYITRFNEEALQVEGYSDGTTLAEFVSR
AQKYMSAEELLRSKKSEQEHKRHSSFDQDRKREKRQRTDDGDRGRADNDHG