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Lag0035516 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035516
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA-directed DNA polymerase
Genome locationchr3:23184942..23187806
RNA-Seq ExpressionLag0035516
SyntenyLag0035516
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_024022362.1 uncharacterized protein LOC112091881 [Morus notabilis]2.0e-2065.43Show/hide
Query:  KEIQSVSPLKQEILTKKKRLGEFESVSLIEECSAILKNGLPPKAKDPGSFTIPISRGENELGRALCDLGASINLMPLSIYQ
        +++ S     + IL+KK+RLGEFE+V+L EECSAILKN LPPK KDPGSFTIP S G+  +G+ALCDLGASINLMP+SI++
Subjt:  KEIQSVSPLKQEILTKKKRLGEFESVSLIEECSAILKNGLPPKAKDPGSFTIPISRGENELGRALCDLGASINLMPLSIYQ

XP_024028414.1 uncharacterized protein LOC112093694 [Morus notabilis]7.5e-2062.96Show/hide
Query:  KEIQSVSPLKQEILTKKKRLGEFESVSLIEECSAILKNGLPPKAKDPGSFTIPISRGENELGRALCDLGASINLMPLSIYQ
        +++ S +   ++++TKK RLGEF++V+L EECSAIL+N LPPK KDPGSFTIP S G    GRALCDLGASINLMP+SI++
Subjt:  KEIQSVSPLKQEILTKKKRLGEFESVSLIEECSAILKNGLPPKAKDPGSFTIPISRGENELGRALCDLGASINLMPLSIYQ

XP_024028757.1 uncharacterized protein LOC112093792 [Morus notabilis]2.3e-2166.67Show/hide
Query:  KEIQSVSPLKQEILTKKKRLGEFESVSLIEECSAILKNGLPPKAKDPGSFTIPISRGENELGRALCDLGASINLMPLSIYQ
        +++ S     ++ILTKK+RLGEFE+V+L EECSAILKN LPPK KDPGSFTIP S G+  +G+ALCDLGASINLMP+SI++
Subjt:  KEIQSVSPLKQEILTKKKRLGEFESVSLIEECSAILKNGLPPKAKDPGSFTIPISRGENELGRALCDLGASINLMPLSIYQ

XP_030502183.1 uncharacterized protein LOC115717351 [Cannabis sativa]9.8e-2070.42Show/hide
Query:  QEILTKKKRLGEFESVSLIEECSAILKNGLPPKAKDPGSFTIPISRGENELGRALCDLGASINLMPLSIYQ
        ++ILTKK+RLGEFE+V+L E CSA+LK+ +PPK KDPGSFTIP S G  ++GRALCDLGASINLMP+SI++
Subjt:  QEILTKKKRLGEFESVSLIEECSAILKNGLPPKAKDPGSFTIPISRGENELGRALCDLGASINLMPLSIYQ

XP_030509265.1 uncharacterized protein LOC115723943 [Cannabis sativa]9.8e-2070.42Show/hide
Query:  QEILTKKKRLGEFESVSLIEECSAILKNGLPPKAKDPGSFTIPISRGENELGRALCDLGASINLMPLSIYQ
        ++ILTKK+RLGEFE+V+L E CSA+LK+ +PPK KDPGSFTIP S G  ++GRALCDLGASINLMP+SI++
Subjt:  QEILTKKKRLGEFESVSLIEECSAILKNGLPPKAKDPGSFTIPISRGENELGRALCDLGASINLMPLSIYQ

TrEMBL top hitse value%identityAlignment
A0A2G9HH15 Reverse transcriptase2.4e-1955.1Show/hide
Query:  SKEDPLVVRDSLVKKNKKEIQSVSPLKQEILTKKKRLGEFESVSLIEECSAILKNGLPPKAKDPGSFTIPISRGENELGRALCDLGASINLMPLSIYQ
        S+E    +   L  K  +++ S     ++IL+KK+RLG++E+V+L EECSAI++N LPPK KDPGSFTIP + G +  GRALCDLGASINLMP SIY+
Subjt:  SKEDPLVVRDSLVKKNKKEIQSVSPLKQEILTKKKRLGEFESVSLIEECSAILKNGLPPKAKDPGSFTIPISRGENELGRALCDLGASINLMPLSIYQ

A0A2G9HP96 DNA-directed DNA polymerase8.1e-2052.83Show/hide
Query:  WFEDSKEDPLVVRDSLVK----KNKKEIQSVSPLKQEILTKKKRLGEFESVSLIEECSAILKNGLPPKAKDPGSFTIPISRGENELGRALCDLGASINLM
        WFE   ED +      +     K  +++ S     ++IL+KK+RLG++E+V+L EECSAI++N LPPK KDPGSFTIP + G +  GRALCDLGASINLM
Subjt:  WFEDSKEDPLVVRDSLVK----KNKKEIQSVSPLKQEILTKKKRLGEFESVSLIEECSAILKNGLPPKAKDPGSFTIPISRGENELGRALCDLGASINLM

Query:  PLSIYQ
        P SIY+
Subjt:  PLSIYQ

A0A2G9HWL8 DNA-directed DNA polymerase1.4e-1956.12Show/hide
Query:  SKEDPLVVRDSLVKKNKKEIQSVSPLKQEILTKKKRLGEFESVSLIEECSAILKNGLPPKAKDPGSFTIPISRGENELGRALCDLGASINLMPLSIYQ
        S+E    V   L  K  +++ S     ++IL+KK+RLG++E+V+L EECSAI++N LPPK KDPGSFTIP + G +  GRALCDLGASINLMP SIY+
Subjt:  SKEDPLVVRDSLVKKNKKEIQSVSPLKQEILTKKKRLGEFESVSLIEECSAILKNGLPPKAKDPGSFTIPISRGENELGRALCDLGASINLMPLSIYQ

A0A2G9HYA0 Reverse transcriptase4.0e-1961.73Show/hide
Query:  KEIQSVSPLKQEILTKKKRLGEFESVSLIEECSAILKNGLPPKAKDPGSFTIPISRGENELGRALCDLGASINLMPLSIYQ
        +++ S     ++IL+KK+RLG++E+V+L EECSAI++N LPPK KDPGSFTIP + G +  GRALCDLGASINLMP SIY+
Subjt:  KEIQSVSPLKQEILTKKKRLGEFESVSLIEECSAILKNGLPPKAKDPGSFTIPISRGENELGRALCDLGASINLMPLSIYQ

A0A2G9I766 DNA-directed DNA polymerase3.1e-1948.33Show/hide
Query:  PSFVFPAKNGEGGSFLPTWFEDSKEDPLVVRDSLVKKNKKEIQSVSPLKQEILTKKKRLGEFESVSLIEECSAILKNGLPPKAKDPGSFTIPISRGENEL
        PS   P    +G   +    E   E PL V      K  +++ S     ++IL+KK+RLG++E+V+L EECSAI++N LPPK KDP SFTIP + G +  
Subjt:  PSFVFPAKNGEGGSFLPTWFEDSKEDPLVVRDSLVKKNKKEIQSVSPLKQEILTKKKRLGEFESVSLIEECSAILKNGLPPKAKDPGSFTIPISRGENEL

Query:  GRALCDLGASINLMPLSIYQ
        GRALCDLGASINL+P SIY+
Subjt:  GRALCDLGASINLMPLSIYQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGGCGGTCGGGGAGAAATCACGTTGCTTAGAGTTCCAAGTTGTCAAGAACAGATCTGGCTATCGGAGATGGAGGTTCGTCCTCGCCAATTCGTGGTCGTCGAACA
GATGAGCTTGCGCCCCCGTGGGTCCGTCGTTGGAGGTTCCGTCACACTACAAACTCTTGCACTGTGGCTCGTCGCCAGGAGAGTTGGTTGCGTGTGCGTAGCGGTTCGTG
ATAGGTCGGAGGAGCAGCTGCTAACGTCGAAGGAGGAGGAGACTGGCCTGAGTTGGGCTGGAGACAAAGGTGGGGGGAGGGAAGAACAAGCCACCGCCGGCGGTTTGCGA
TTTCGCTGGAAAATCGGGGAGGGAGCTCCCTCCTTTGTTTTTCCGGCGAAAAACGGGGAGGGAGGGAGCTTCCTCCCTACTTGGTTTGAGGATAGCAAGGAAGATCCTTT
GGTGGTTCGTGACTCGTTGGTGAAGAAAAACAAGAAGGAAATCCAATCAGTTTCTCCATTGAAACAAGAGATCCTGACAAAGAAGAAGAGATTAGGAGAGTTCGAGAGTG
TGTCTCTTATTGAGGAATGTAGTGCTATTCTTAAGAATGGGCTACCTCCCAAGGCTAAGGATCCAGGATCATTCACTATTCCTATCTCTAGAGGAGAAAATGAGTTGGGG
AGAGCACTTTGTGATTTAGGCGCAAGCATAAACCTTATGCCTCTCTCAATTTATCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCGGCGGTCGGGGAGAAATCACGTTGCTTAGAGTTCCAAGTTGTCAAGAACAGATCTGGCTATCGGAGATGGAGGTTCGTCCTCGCCAATTCGTGGTCGTCGAACA
GATGAGCTTGCGCCCCCGTGGGTCCGTCGTTGGAGGTTCCGTCACACTACAAACTCTTGCACTGTGGCTCGTCGCCAGGAGAGTTGGTTGCGTGTGCGTAGCGGTTCGTG
ATAGGTCGGAGGAGCAGCTGCTAACGTCGAAGGAGGAGGAGACTGGCCTGAGTTGGGCTGGAGACAAAGGTGGGGGGAGGGAAGAACAAGCCACCGCCGGCGGTTTGCGA
TTTCGCTGGAAAATCGGGGAGGGAGCTCCCTCCTTTGTTTTTCCGGCGAAAAACGGGGAGGGAGGGAGCTTCCTCCCTACTTGGTTTGAGGATAGCAAGGAAGATCCTTT
GGTGGTTCGTGACTCGTTGGTGAAGAAAAACAAGAAGGAAATCCAATCAGTTTCTCCATTGAAACAAGAGATCCTGACAAAGAAGAAGAGATTAGGAGAGTTCGAGAGTG
TGTCTCTTATTGAGGAATGTAGTGCTATTCTTAAGAATGGGCTACCTCCCAAGGCTAAGGATCCAGGATCATTCACTATTCCTATCTCTAGAGGAGAAAATGAGTTGGGG
AGAGCACTTTGTGATTTAGGCGCAAGCATAAACCTTATGCCTCTCTCAATTTATCAATAG
Protein sequenceShow/hide protein sequence
MVGGRGEITLLRVPSCQEQIWLSEMEVRPRQFVVVEQMSLRPRGSVVGGSVTLQTLALWLVARRVGCVCVAVRDRSEEQLLTSKEEETGLSWAGDKGGGREEQATAGGLR
FRWKIGEGAPSFVFPAKNGEGGSFLPTWFEDSKEDPLVVRDSLVKKNKKEIQSVSPLKQEILTKKKRLGEFESVSLIEECSAILKNGLPPKAKDPGSFTIPISRGENELG
RALCDLGASINLMPLSIYQ