; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035532 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035532
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr3:23576428..23578602
RNA-Seq ExpressionLag0035532
SyntenyLag0035532
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR017956 - AT hook, DNA-binding motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038841628.1 elastin-like, partial [Salvelinus namaycush]1.4e-0626.74Show/hide
Query:  PALSWGLREEVPGPLFKHRGHPRGAYTLLGKCLGRPRKFSGLSSSIMVIS-GVRTLFWG---KAWGGLGSS-GPLFKHHG--------------HPRGAY
        P +SW      PG  + H G   G   L    L        LS  I+ +S G+  L WG    +WG L  S G L    G              +P   +
Subjt:  PALSWGLREEVPGPLFKHRGHPRGAYTLLGKCLGRPRKFSGLSSSIMVIS-GVRTLFWG---KAWGGLGSS-GPLFKHHG--------------HPRGAY

Query:  TLLGKSLGRPRKF---PGLSSSIVVIPGGAYTLLGKSLGRPRKFPGLSSSIVVILREVLGPLFKHRGHPKGAYTLL----GKSLGRSRKFPGLSSSTVVI
          LG  LG P  F   PG+S  I+ + GG   L G  L     +PG+S      +R   G +  + G   G +  +    G  LG     PG   S +  
Subjt:  TLLGKSLGRPRKF---PGLSSSIVVIPGGAYTLLGKSLGRPRKFPGLSSSIVVILREVLGPLFKHRGHPKGAYTLL----GKSLGRSRKFPGLSSSTVVI

Query:  PGVRTLFWGKAWGGLGSSRASLQA-------SWSSQG---GAYTLLGKSLGRPRKFPGLSSSIVVIP----GVRTLFW---GKAWGGLGSSRASLQASWS
        PGV  L+    WG  GS      +        W   G   G   L    LG P    G   SI   P    G+  L W     +WG L  S      SW 
Subjt:  PGVRTLFWGKAWGGLGSSRASLQA-------SWSSQG---GAYTLLGKSLGRPRKFPGLSSSIVVIP----GVRTLFW---GKAWGGLGSSRASLQASWS

Query:  SQGGAYTLLGKS----------LGRPRKFPGLSSSIVVIL----GVRTLFWGKAWNLIPRVRTLSRGLGISSRG
          G  +   G S          L     +PG   SI+ +     G+  L+ G +W     +  LS G+   SRG
Subjt:  SQGGAYTLLGKS----------LGRPRKFPGLSSSIVVIL----GVRTLFWGKAWNLIPRVRTLSRGLGISSRG

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTCAAATACTATGGAAAAATGTTGGGCCTTTGAGGGTGGAGCTCGGCCTTGGCCTCTGGATGGTCGACCTCGGCCTTGGCATGGGGTCGACCAGCTCCTCTGCGTT
GTTTGCTTGCTTGTTTTCCATTCCAAGGATACCTGCACTCAGTTGGGGACTTAGGGAGGAAGTTCCCGGTCCTCTCTTCAAGCATCGTGGTCATCCCAGGGGTGCGTACA
CTCTTCTGGGGAAATGCTTGGGGAGGCCTAGGAAGTTCTCGGGCCTCTCTTCAAGCATCATGGTCATCTCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGC
CTAGGAAGTTCCGGGCCTCTCTTCAAGCATCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAG
CATCGTGGTCATCCCAGGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATCGTGGTCATCCTAAGGGAAGTTC
TCGGGCCTCTCTTCAAGCATCGTGGTCATCCCAAGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGTCTAGGAAGTTCCCGGGCCTCTCTTCAAGCACCGTGGTC
ATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATCGTGGTCATCCCAGGGGGGTGCGTACACTCTTCT
GGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATCGTGGTCATCCCAGGGGTGCGTACACTCTTTTGGGGAAAAGCTTGGGGAGGCCTAGGAA
GTTCCCGTGCCTCTCTTCAAGCATCGTGGTCATCCCAGGGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATC
GTGGTCATCCTAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGAATCTCATCCCGAGGGTGCGTACCCTCAGTCGAGGTCTTGGAATCTCATCTCGAGGGTGCGTACA
CTCAATCGAGGTCTTGGAATCTCATCTCGAGGGTGAGTACACTCAGTCGAGGTCTTGGAATCTCATCTCGAGGGTGGGTACACTCAATCGAGGTCTTGGAATCTCATCTC
GAGGGTGTGTACACTCAATCGAGGTCTTGGAATTTCATCTCGACGGTGCGTACACTCGATCGAGGGCTTTGAAGGACCCAACCTCTGCAAGGGGAAACATATTCCCTGTG
CAGCCCCCTACTCAAGCAAGGTTTTTCTCGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGTCAAATACTATGGAAAAATGTTGGGCCTTTGAGGGTGGAGCTCGGCCTTGGCCTCTGGATGGTCGACCTCGGCCTTGGCATGGGGTCGACCAGCTCCTCTGCGTT
GTTTGCTTGCTTGTTTTCCATTCCAAGGATACCTGCACTCAGTTGGGGACTTAGGGAGGAAGTTCCCGGTCCTCTCTTCAAGCATCGTGGTCATCCCAGGGGTGCGTACA
CTCTTCTGGGGAAATGCTTGGGGAGGCCTAGGAAGTTCTCGGGCCTCTCTTCAAGCATCATGGTCATCTCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGC
CTAGGAAGTTCCGGGCCTCTCTTCAAGCATCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAG
CATCGTGGTCATCCCAGGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATCGTGGTCATCCTAAGGGAAGTTC
TCGGGCCTCTCTTCAAGCATCGTGGTCATCCCAAGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGTCTAGGAAGTTCCCGGGCCTCTCTTCAAGCACCGTGGTC
ATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATCGTGGTCATCCCAGGGGGGTGCGTACACTCTTCT
GGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATCGTGGTCATCCCAGGGGTGCGTACACTCTTTTGGGGAAAAGCTTGGGGAGGCCTAGGAA
GTTCCCGTGCCTCTCTTCAAGCATCGTGGTCATCCCAGGGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATC
GTGGTCATCCTAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGAATCTCATCCCGAGGGTGCGTACCCTCAGTCGAGGTCTTGGAATCTCATCTCGAGGGTGCGTACA
CTCAATCGAGGTCTTGGAATCTCATCTCGAGGGTGAGTACACTCAGTCGAGGTCTTGGAATCTCATCTCGAGGGTGGGTACACTCAATCGAGGTCTTGGAATCTCATCTC
GAGGGTGTGTACACTCAATCGAGGTCTTGGAATTTCATCTCGACGGTGCGTACACTCGATCGAGGGCTTTGAAGGACCCAACCTCTGCAAGGGGAAACATATTCCCTGTG
CAGCCCCCTACTCAAGCAAGGTTTTTCTCGAAGTAA
Protein sequenceShow/hide protein sequence
MRQILWKNVGPLRVELGLGLWMVDLGLGMGSTSSSALFACLFSIPRIPALSWGLREEVPGPLFKHRGHPRGAYTLLGKCLGRPRKFSGLSSSIMVISGVRTLFWGKAWGG
LGSSGPLFKHHGHPRGAYTLLGKSLGRPRKFPGLSSSIVVIPGGAYTLLGKSLGRPRKFPGLSSSIVVILREVLGPLFKHRGHPKGAYTLLGKSLGRSRKFPGLSSSTVV
IPGVRTLFWGKAWGGLGSSRASLQASWSSQGGAYTLLGKSLGRPRKFPGLSSSIVVIPGVRTLFWGKAWGGLGSSRASLQASWSSQGGAYTLLGKSLGRPRKFPGLSSSI
VVILGVRTLFWGKAWNLIPRVRTLSRGLGISSRGCVHSIEVLESHLEGEYTQSRSWNLISRVGTLNRGLGISSRGCVHSIEVLEFHLDGAYTRSRALKDPTSARGNIFPV
QPPTQARFFSK