; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035566 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035566
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPseudouridine synthase family protein
Genome locationchr3:24220213..24228119
RNA-Seq ExpressionLag0035566
SyntenyLag0035566
Gene Ontology termsGO:0001522 - pseudouridine synthesis (biological process)
GO:0008033 - tRNA processing (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0009982 - pseudouridine synthase activity (molecular function)
InterPro domainsIPR001656 - Pseudouridine synthase, TruD
IPR020103 - Pseudouridine synthase, catalytic domain superfamily
IPR042214 - Pseudouridine synthase, TruD, catalytic domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588316.1 hypothetical protein SDJN03_16881, partial [Cucurbita argyrosperma subsp. sororia]2.5e-5795.9Show/hide
Query:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA
        FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKR+I+TQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADS+D 
Subjt:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA

Query:  IKASAEALGRHGFINYFGLQVF
        IKASAEALGRHGFINYFGLQ F
Subjt:  IKASAEALGRHGFINYFGLQVF

KAG7020877.1 SPBC1A4.09 [Cucurbita argyrosperma subsp. argyrosperma]2.5e-5795.9Show/hide
Query:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA
        FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKR+I+TQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADS+D 
Subjt:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA

Query:  IKASAEALGRHGFINYFGLQVF
        IKASAEALGRHGFINYFGLQ F
Subjt:  IKASAEALGRHGFINYFGLQVF

XP_022159173.1 pseudouridylate synthase 7 homolog [Momordica charantia]3.9e-5897.54Show/hide
Query:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA
        FHLYKENKDTQEALGLIGKMLGIQTRSFGF+GTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADS+DA
Subjt:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA

Query:  IKASAEALGRHGFINYFGLQVF
        IKASAEALGRHGFINYFGLQ F
Subjt:  IKASAEALGRHGFINYFGLQVF

XP_022933545.1 multisubstrate pseudouridine synthase 7 [Cucurbita moschata]2.5e-5795.9Show/hide
Query:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA
        FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKR+I+TQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADS+D 
Subjt:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA

Query:  IKASAEALGRHGFINYFGLQVF
        IKASAEALGRHGFINYFGLQ F
Subjt:  IKASAEALGRHGFINYFGLQVF

XP_023531231.1 multisubstrate pseudouridine synthase 7 [Cucurbita pepo subsp. pepo]2.5e-5795.9Show/hide
Query:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA
        FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKR+I+TQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADS+D 
Subjt:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA

Query:  IKASAEALGRHGFINYFGLQVF
        IKASAEALGRHGFINYFGLQ F
Subjt:  IKASAEALGRHGFINYFGLQVF

TrEMBL top hitse value%identityAlignment
A0A0A0M0H8 Uncharacterized protein1.2e-5796.69Show/hide
Query:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA
        FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASR+AALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVA+S+D 
Subjt:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA

Query:  IKASAEALGRHGFINYFGLQV
        IKASAEALGRHGFINYFGLQV
Subjt:  IKASAEALGRHGFINYFGLQV

A0A1S3CHJ1 pseudouridylate synthase 7 homolog isoform X17.9e-5795.08Show/hide
Query:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA
        FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASR+AALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVA+S+D 
Subjt:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA

Query:  IKASAEALGRHGFINYFGLQVF
        IKASAEALG HGFINYFGLQ F
Subjt:  IKASAEALGRHGFINYFGLQVF

A0A5A7V3D9 Pseudouridylate synthase 7-like protein isoform X17.9e-5795.08Show/hide
Query:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA
        FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASR+AALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVA+S+D 
Subjt:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA

Query:  IKASAEALGRHGFINYFGLQVF
        IKASAEALG HGFINYFGLQ F
Subjt:  IKASAEALGRHGFINYFGLQVF

A0A6J1DY30 pseudouridylate synthase 7 homolog1.9e-5897.54Show/hide
Query:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA
        FHLYKENKDTQEALGLIGKMLGIQTRSFGF+GTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADS+DA
Subjt:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA

Query:  IKASAEALGRHGFINYFGLQVF
        IKASAEALGRHGFINYFGLQ F
Subjt:  IKASAEALGRHGFINYFGLQVF

A0A6J1F560 multisubstrate pseudouridine synthase 71.2e-5795.9Show/hide
Query:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA
        FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKR+I+TQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADS+D 
Subjt:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA

Query:  IKASAEALGRHGFINYFGLQVF
        IKASAEALGRHGFINYFGLQ F
Subjt:  IKASAEALGRHGFINYFGLQVF

SwissProt top hitse value%identityAlignment
O74343 Multisubstrate pseudouridine synthase 73.8e-2446.46Show/hide
Query:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALN-----DRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVA
        FHLYKEN+D+ + LG I ++L + TR+   AGTKD+R ++ QRV +    ASRLA LN     +   G  LGN+SY    L LG L GN F I +R V+ 
Subjt:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALN-----DRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVA

Query:  DSDDAIKASAEALGRHGFINYFGLQVF
          +  ++A   +L  HGFINYFGLQ F
Subjt:  DSDDAIKASAEALGRHGFINYFGLQVF

Q08647 Multisubstrate pseudouridine synthase 73.9e-2140.94Show/hide
Query:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADS---
        F L+KENKDT EA+ +I K+L + +R   +AGTKD+R+++ QRV++ K    RL ALN  L G+ +GN+++    L LG L GN F + +R V   +   
Subjt:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADS---

Query:  --DDAIKASAEALGRHGFINYFGLQVF
          ++ +    ++L  +GFINYFG+Q F
Subjt:  --DDAIKASAEALGRHGFINYFGLQVF

Q08DI8 Pseudouridylate synthase 7 homolog1.3e-2447.54Show/hide
Query:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA
        F LYKENKDT +A+ L+ K L ++   F + GTKDKR+I+ Q + V K  A RLA LN  L+  KLGNFSY +  L LG+L GN FT+ LR +   +D+ 
Subjt:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA

Query:  IKASAEALGRHGFINYFGLQVF
        ++ +  +L   GFINY+G+Q F
Subjt:  IKASAEALGRHGFINYFGLQVF

Q91VU7 Pseudouridylate synthase 7 homolog1.3e-2446.72Show/hide
Query:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA
        F LYKENKDT +A+ ++ K L ++   F + GTKDKR+I+ Q + V K  A RLA LN  L+ +KLGNFSY +  L LG L GN FT+ LR +   +D+ 
Subjt:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA

Query:  IKASAEALGRHGFINYFGLQVF
        ++ + ++L   GFINY+G+Q F
Subjt:  IKASAEALGRHGFINYFGLQVF

Q96PZ0 Pseudouridylate synthase 7 homolog7.6e-2547.54Show/hide
Query:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA
        F LYKENKDT +A+ ++ K L ++   F + GTKDKR+I+ Q + V K  A RLA LN  L+  KLGNFSY +  L LG+L GN FT+ LR +   +DD 
Subjt:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA

Query:  IKASAEALGRHGFINYFGLQVF
        ++ +  +L   GFINY+G+Q F
Subjt:  IKASAEALGRHGFINYFGLQVF

Arabidopsis top hitse value%identityAlignment
AT3G04820.1 Pseudouridine synthase family protein9.8e-5280.33Show/hide
Query:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA
        FHLYKENKDTQEALGLIGKMLG+Q +SFGF+GTKDKRS+STQRVTVFKQ AS+LAALN RL GIK+G+F  ++EGLLLGQL+GNRFTITLRGVVADS++ 
Subjt:  FHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDA

Query:  IKASAEALGRHGFINYFGLQVF
        IK SAE+LG+ GFINYFGLQ F
Subjt:  IKASAEALGRHGFINYFGLQVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCCGCTATCAAAGGAGAGGAAACCACGTGTGAATCGTGTCGGAGATGAGCTTGCCACTGCTGCCATTAGGAATGGAGGATGTTGGAGGATGGTGGAGGCTGGGTT
GGAGATGGATACTGTAAAAGATGAAACTCAAATCAGCCATTCAACAACTTCTTCTTTGAAATCCCTTCTGAAATGCAAATCCCATAAAGCCAAATCTGGGTTCCACATAT
CTTTAACAGCACCTGTTGCCTATTGGTTTCATCTTTACAAGGAGAATAAGGACACGCAAGAGGCATTGGGACTTATAGGAAAGATGCTTGGTATCCAGACGAGGTCTTTT
GGTTTTGCTGGCACTAAGGATAAGCGCTCCATCTCAACTCAAAGGGTCACTGTATTTAAGCAACACGCTAGTAGATTAGCTGCTCTTAATGATCGGTTGATTGGTATCAA
GTTGGGTAACTTTAGCTATATCCAGGAAGGACTTCTTCTTGGACAGCTCCTGGGTAACCGGTTTACCATCACCTTGCGAGGAGTTGTAGCAGATAGTGATGACGCCATCA
AAGCATCTGCTGAAGCTTTAGGAAGGCATGGTTTTATTAATTACTTTGGCTTACAGGTATTTCTTTTCTGCGCCATTCTTATTAAAAGCTTATGTTGTAGATGCGGTGTG
TGGTCTTTGACTCTGAATTTGAATTTGTTCAAACCCACCATAGCTTGTACAAATATGTCAAGGGGTGACTTTGGAAGGCTCTTGGGAGATGGGTTATTAGTCAGCATTTG
GTCCTCGGGTTGGCAAGTTCTAAAAGTGCCTCTTATCTTTGAAGTCCCTGGGGCATCCTTTCGAGATGTTGTACTGCTAACAAATAGTCTATCATCCCTGGGAGGAGAGA
TGTTAGAGTTTGGTCTCCTGATCCTTTCAGGGGTTTATCTTGCCGATCCTACTTCCAGTCTTTGTCGCTCTCTTGTTACCTCTGAAGCGTATGTTTTTGCCTTTCTCTGG
AAGATTAAAATTCCTAAGAAGGTGAGGGTTTTTGCGTGGCAAGTTTTACTTGGGAAGGTTAATACTTTGAATCGTGTTCAAAGGCACTCTTCCTTAGTTTTGTTTTCACG
GTGGTGCATTCTTTATAGGAGGCATGAGGACTTCGAAGCATTTACTAGAGGAGTGCCAGTTTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCCCGCTATCAAAGGAGAGGAAACCACGTGTGAATCGTGTCGGAGATGAGCTTGCCACTGCTGCCATTAGGAATGGAGGATGTTGGAGGATGGTGGAGGCTGGGTT
GGAGATGGATACTGTAAAAGATGAAACTCAAATCAGCCATTCAACAACTTCTTCTTTGAAATCCCTTCTGAAATGCAAATCCCATAAAGCCAAATCTGGGTTCCACATAT
CTTTAACAGCACCTGTTGCCTATTGGTTTCATCTTTACAAGGAGAATAAGGACACGCAAGAGGCATTGGGACTTATAGGAAAGATGCTTGGTATCCAGACGAGGTCTTTT
GGTTTTGCTGGCACTAAGGATAAGCGCTCCATCTCAACTCAAAGGGTCACTGTATTTAAGCAACACGCTAGTAGATTAGCTGCTCTTAATGATCGGTTGATTGGTATCAA
GTTGGGTAACTTTAGCTATATCCAGGAAGGACTTCTTCTTGGACAGCTCCTGGGTAACCGGTTTACCATCACCTTGCGAGGAGTTGTAGCAGATAGTGATGACGCCATCA
AAGCATCTGCTGAAGCTTTAGGAAGGCATGGTTTTATTAATTACTTTGGCTTACAGGTATTTCTTTTCTGCGCCATTCTTATTAAAAGCTTATGTTGTAGATGCGGTGTG
TGGTCTTTGACTCTGAATTTGAATTTGTTCAAACCCACCATAGCTTGTACAAATATGTCAAGGGGTGACTTTGGAAGGCTCTTGGGAGATGGGTTATTAGTCAGCATTTG
GTCCTCGGGTTGGCAAGTTCTAAAAGTGCCTCTTATCTTTGAAGTCCCTGGGGCATCCTTTCGAGATGTTGTACTGCTAACAAATAGTCTATCATCCCTGGGAGGAGAGA
TGTTAGAGTTTGGTCTCCTGATCCTTTCAGGGGTTTATCTTGCCGATCCTACTTCCAGTCTTTGTCGCTCTCTTGTTACCTCTGAAGCGTATGTTTTTGCCTTTCTCTGG
AAGATTAAAATTCCTAAGAAGGTGAGGGTTTTTGCGTGGCAAGTTTTACTTGGGAAGGTTAATACTTTGAATCGTGTTCAAAGGCACTCTTCCTTAGTTTTGTTTTCACG
GTGGTGCATTCTTTATAGGAGGCATGAGGACTTCGAAGCATTTACTAGAGGAGTGCCAGTTTGCTAA
Protein sequenceShow/hide protein sequence
MLPLSKERKPRVNRVGDELATAAIRNGGCWRMVEAGLEMDTVKDETQISHSTTSSLKSLLKCKSHKAKSGFHISLTAPVAYWFHLYKENKDTQEALGLIGKMLGIQTRSF
GFAGTKDKRSISTQRVTVFKQHASRLAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVADSDDAIKASAEALGRHGFINYFGLQVFLFCAILIKSLCCRCGV
WSLTLNLNLFKPTIACTNMSRGDFGRLLGDGLLVSIWSSGWQVLKVPLIFEVPGASFRDVVLLTNSLSSLGGEMLEFGLLILSGVYLADPTSSLCRSLVTSEAYVFAFLW
KIKIPKKVRVFAWQVLLGKVNTLNRVQRHSSLVLFSRWCILYRRHEDFEAFTRGVPVC