; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035568 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035568
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionpseudouridylate synthase 7 homolog
Genome locationchr3:24240103..24241471
RNA-Seq ExpressionLag0035568
SyntenyLag0035568
Gene Ontology termsGO:0001522 - pseudouridine synthesis (biological process)
GO:0008033 - tRNA processing (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0009982 - pseudouridine synthase activity (molecular function)
InterPro domainsIPR001656 - Pseudouridine synthase, TruD
IPR020103 - Pseudouridine synthase, catalytic domain superfamily
IPR042214 - Pseudouridine synthase, TruD, catalytic domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011660284.1 LOW QUALITY PROTEIN: pseudouridylate synthase 7 homolog [Cucumis sativus]1.4e-5583.1Show/hide
Query:  RDSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAADE
        +DSISLT ++HNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDL NLLKS+SVEI+KEEK +DKSK+E SLDS +QS CCKK+++L A  
Subjt:  RDSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAADE

Query:  NENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTSV
         EN NGQGTQDPQMALK+SFTLP SSYATMAIRELLKTSTSV
Subjt:  NENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTSV

XP_023531231.1 multisubstrate pseudouridine synthase 7 [Cucurbita pepo subsp. pepo]5.3e-5584.51Show/hide
Query:  RDSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAADE
        +DSI+LTETIHNVKEFSIT+MTGSYR VFQRPKDYEWELISYVDRNLPLA+SDLDNLLKS+SVEITKEEK  DKSKDE SLDS EQSG CKK  KL A+E
Subjt:  RDSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAADE

Query:  NENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTSV
        NE  NG+  QDPQMALK+SF LPTSSYATMAIRELLKTSTSV
Subjt:  NENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTSV

XP_031745921.1 multisubstrate pseudouridine synthase 7-like, partial [Cucumis sativus]1.4e-5583.1Show/hide
Query:  RDSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAADE
        +DSISLT ++HNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDL NLLKS+SVEI+KEEK +DKSK+E SLDS +QS CCKK+++L A  
Subjt:  RDSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAADE

Query:  NENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTSV
         EN NGQGTQDPQMALK+SFTLP SSYATMAIRELLKTSTSV
Subjt:  NENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTSV

XP_038878530.1 pseudouridylate synthase 7 homolog isoform X1 [Benincasa hispida]9.1e-5580.39Show/hide
Query:  RDSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAA--
        +DSISL ET+HNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDL NLLKS+SVEI+KEEK +DKS +E  LDS EQSGCCKK+++L A  
Subjt:  RDSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAA--

Query:  --DENENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTSVRSLLSLF
          +ENEN N QG+QD Q+ALK+SFTLP SSYATMAIRELLKTSTSVRS+LSLF
Subjt:  --DENENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTSVRSLLSLF

XP_038878533.1 pseudouridylate synthase 7 homolog isoform X3 [Benincasa hispida]4.1e-5580.52Show/hide
Query:  VRDSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAA-
        V+DSISL ET+HNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDL NLLKS+SVEI+KEEK +DKS +E  LDS EQSGCCKK+++L A 
Subjt:  VRDSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAA-

Query:  ---DENENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTSVRSLLSLF
           +ENEN N QG+QD Q+ALK+SFTLP SSYATMAIRELLKTSTSVRS+LSLF
Subjt:  ---DENENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTSVRSLLSLF

TrEMBL top hitse value%identityAlignment
A0A0A0LYD2 Uncharacterized protein3.4e-5583.57Show/hide
Query:  DSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAADEN
        DSISLT ++HNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDL NLLKS+SVEI+KEEK +DKSK+E SLDS +QS CCKK+++L A   
Subjt:  DSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAADEN

Query:  ENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTS
        EN NGQGTQDPQMALK+SFTLP SSYATMAIRELLKTSTS
Subjt:  ENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTS

A0A1S3CHJ1 pseudouridylate synthase 7 homolog isoform X11.1e-5381.69Show/hide
Query:  RDSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAADE
        +DSISLTE++HNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDL  LLKS+SVEI+KEEK ++KSK E SLDS +QS CCKKD++L A  
Subjt:  RDSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAADE

Query:  NENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTSV
        NE   GQGT DPQMALK+SFTLP SSYATMAIRELLKTSTSV
Subjt:  NENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTSV

A0A6J1F560 multisubstrate pseudouridine synthase 77.5e-5583.8Show/hide
Query:  RDSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAADE
        +DSI+LTETIHNVKEFSIT+MTGSYR VFQRPKDYEWELISYVDRNLPLA+SDLDNLLKS+SVEI KEEK  DKSKDE SLDS EQSG CKK  KL A+E
Subjt:  RDSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAADE

Query:  NENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTSV
        NE  NG+  QDPQMALK+SF LPTSSYATMAIRELLKTSTSV
Subjt:  NENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTSV

A0A6J1KIA3 putative pseudouridine synthase C1A4.09 isoform X24.4e-5584.51Show/hide
Query:  RDSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAADE
        +DSI+LTETIHNVKEFSIT+MTGSYR VFQRPKDYEWELISYVDRNLPLA+SDLDNLLKS SVEITKEEK  DKSKDE SLDS EQSG CKK  KL A+E
Subjt:  RDSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAADE

Query:  NENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTSV
        NE  NG+  QDPQMALK+SF LPTSSYATMAIRELLKTSTSV
Subjt:  NENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTSV

A0A6J1KMR0 multisubstrate pseudouridine synthase 7 isoform X14.4e-5584.51Show/hide
Query:  RDSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAADE
        +DSI+LTETIHNVKEFSIT+MTGSYR VFQRPKDYEWELISYVDRNLPLA+SDLDNLLKS SVEITKEEK  DKSKDE SLDS EQSG CKK  KL A+E
Subjt:  RDSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAADE

Query:  NENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTSV
        NE  NG+  QDPQMALK+SF LPTSSYATMAIRELLKTSTSV
Subjt:  NENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTSV

SwissProt top hitse value%identityAlignment
Q08647 Multisubstrate pseudouridine synthase 72.8e-0635.48Show/hide
Query:  SMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAADENENGNGQGTQDPQMALKMS
        S+ GSYR V Q+PK  E+ +I Y D +  L  +DLD L  +R                      A++SG  +K MK   D      G      + A+ + 
Subjt:  SMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAADENENGNGQGTQDPQMALKMS

Query:  FTLPTSSYATMAIRELLKTSTSVR
        F L TS+YATMA+REL+K  TS R
Subjt:  FTLPTSSYATMAIRELLKTSTSVR

Q08DI8 Pseudouridylate synthase 7 homolog6.0e-0927.89Show/hide
Query:  DSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAADEN
        D++ +    H ++++   S++G+YR++  RP++  WE+++Y D  +PL  +D+DNL          E K+                              
Subjt:  DSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAADEN

Query:  ENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTSVRSLLSL
                     ALKM F+LP S+YATMAIRE+LK  TS+++   L
Subjt:  ENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTSVRSLLSL

Q91VU7 Pseudouridylate synthase 7 homolog2.7e-0928.57Show/hide
Query:  DSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAADEN
        D++ +    H ++++   S++G+YRR+  RP+   WE+++Y D  +PL  +D+DNL          E K+                              
Subjt:  DSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAADEN

Query:  ENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTSVRSLLSL
                     ALKM F+LP S+YATMAIRE+LK  TS+++   L
Subjt:  ENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTSVRSLLSL

Q96PZ0 Pseudouridylate synthase 7 homolog3.5e-0927.89Show/hide
Query:  DSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAADEN
        D++ +    H ++++   S++G+YR++  RP++  WE+++Y D  +PL  +D+DNL          E K+                              
Subjt:  DSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAEQSGCCKKDMKLAADEN

Query:  ENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTSVRSLLSL
                     ALKM F+LP S+YATMAIRE+LK  TS+++   L
Subjt:  ENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTSVRSLLSL

Arabidopsis top hitse value%identityAlignment
AT3G04820.1 Pseudouridine synthase family protein4.4e-3154.73Show/hide
Query:  RDSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVE-ITKEEKFSDKS--KDEGSLDSAEQSGCCKKDMKLA
        +D ISLTE+IH VKEFSITSMTG YRRVFQ+P D+EWEL++Y D N PLA++DLD +  ++ VE +   E+  D+S   D    DS E       ++K  
Subjt:  RDSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVE-ITKEEKFSDKS--KDEGSLDSAEQSGCCKKDMKLA

Query:  ADENENGNGQGTQD---PQMALKMSFTLPTSSYATMAIRELLKTSTSV
         D NE     G  D    QMALKM+ TLP+S YATMAIRELLKTSTSV
Subjt:  ADENENGNGQGTQD---PQMALKMSFTLPTSSYATMAIRELLKTSTSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGGGATGACTGAGACAAGTCCTCTTTTACGCTGCAGTTTAGTAAATGTGGCCTTATTTCTTTCTCCTGTACGCGATTCAATTAGCTTGACGGAGACTATTCATAA
TGTAAAGGAATTCTCGATTACCAGTATGACTGGAAGCTACCGGAGAGTTTTTCAAAGACCAAAGGACTACGAGTGGGAATTGATCTCATATGTTGATCGTAATTTGCCTC
TGGCACAGAGTGATTTAGACAACCTTTTGAAGTCTCGAAGTGTTGAAATTACCAAGGAAGAAAAATTTTCCGATAAATCTAAAGATGAAGGATCATTGGATTCCGCAGAA
CAATCAGGGTGCTGTAAAAAGGATATGAAGCTTGCAGCAGATGAAAATGAAAATGGAAATGGGCAAGGCACTCAGGATCCTCAGATGGCTCTCAAGATGAGCTTTACTCT
CCCTACATCCTCCTATGCTACAATGGCGATTAGAGAATTGCTGAAAACATCAACTTCTGTGAGATCTCTTCTGTCCCTTTTCATTATTAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGGGATGACTGAGACAAGTCCTCTTTTACGCTGCAGTTTAGTAAATGTGGCCTTATTTCTTTCTCCTGTACGCGATTCAATTAGCTTGACGGAGACTATTCATAA
TGTAAAGGAATTCTCGATTACCAGTATGACTGGAAGCTACCGGAGAGTTTTTCAAAGACCAAAGGACTACGAGTGGGAATTGATCTCATATGTTGATCGTAATTTGCCTC
TGGCACAGAGTGATTTAGACAACCTTTTGAAGTCTCGAAGTGTTGAAATTACCAAGGAAGAAAAATTTTCCGATAAATCTAAAGATGAAGGATCATTGGATTCCGCAGAA
CAATCAGGGTGCTGTAAAAAGGATATGAAGCTTGCAGCAGATGAAAATGAAAATGGAAATGGGCAAGGCACTCAGGATCCTCAGATGGCTCTCAAGATGAGCTTTACTCT
CCCTACATCCTCCTATGCTACAATGGCGATTAGAGAATTGCTGAAAACATCAACTTCTGTGAGATCTCTTCTGTCCCTTTTCATTATTAGCTAA
Protein sequenceShow/hide protein sequence
MNGMTETSPLLRCSLVNVALFLSPVRDSISLTETIHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLDNLLKSRSVEITKEEKFSDKSKDEGSLDSAE
QSGCCKKDMKLAADENENGNGQGTQDPQMALKMSFTLPTSSYATMAIRELLKTSTSVRSLLSLFIIS