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Lag0035573 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035573
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr3:24384321..24385246
RNA-Seq ExpressionLag0035573
SyntenyLag0035573
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB63566.1 hypothetical protein L484_026904 [Morus notabilis]9.4e-0737.18Show/hide
Query:  LRRDFLFERGFGDDLPRFLRTGIAKHGWSQFCAKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLFDL
        + R F++ RG     P F+ + IA H W  FC  P      +VR+FYAN +  E     +RG  + ++  AINSL+DL
Subjt:  LRRDFLFERGFGDDLPRFLRTGIAKHGWSQFCAKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLFDL

KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]3.2e-0734.02Show/hide
Query:  FINNFARAKYVEMLRRDFLFERGF------GDDLPRFLRTGIAKHGWSQFCAKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLFDL
        F++  A+  Y  +  R   FE GF        +L   +   + KH W +F   P PVN+ IV+EFY+NI +      +VRG+ + ++P AIN  F L
Subjt:  FINNFARAKYVEMLRRDFLFERGF------GDDLPRFLRTGIAKHGWSQFCAKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLFDL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.1e-0750.82Show/hide
Query:  FLRTGIAKHGWSQFCAKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLFDL
        F+   I +H W QFCA PE     +VREFYAN+ D E     VRGV V WS  AIN++F L
Subjt:  FLRTGIAKHGWSQFCAKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLFDL

PON85987.1 hypothetical protein TorRG33x02_181920, partial [Trema orientale]4.2e-0738.24Show/hide
Query:  ETEEPQLPYNRFINNFARAKYVEMLRRDFLFERGFGDDLPRFLRTGIAKHGWSQFCAKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLF
        ETEE +  Y   I      K      + FL           F+   I +H W QFCA PE     +VREFYAN+ D E     VRGV V W+  AIN++F
Subjt:  ETEEPQLPYNRFINNFARAKYVEMLRRDFLFERGFGDDLPRFLRTGIAKHGWSQFCAKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLF

Query:  DL
         L
Subjt:  DL

PON90635.1 hypothetical protein TorRG33x02_134920 [Trema orientale]1.9e-0739.39Show/hide
Query:  RFINNFARAKYVEMLRRDFL-FERGFGDD------LPRFLRTGIAKHGWSQFCAKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLFDL
        +F +  A A+Y E ++   L  E+GF  +       P F+   I +H W  FCA  E     +VREFYAN+ D E     V+GV V WS  AIN+LF L
Subjt:  RFINNFARAKYVEMLRRDFL-FERGFGDD------LPRFLRTGIAKHGWSQFCAKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLFDL

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)5.4e-0850.82Show/hide
Query:  FLRTGIAKHGWSQFCAKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLFDL
        F+   I +H W QFCA PE     +VREFYAN+ D E     VRGV V WS  AIN++F L
Subjt:  FLRTGIAKHGWSQFCAKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLFDL

A0A2P5EK98 Uncharacterized protein (Fragment)2.0e-0738.24Show/hide
Query:  ETEEPQLPYNRFINNFARAKYVEMLRRDFLFERGFGDDLPRFLRTGIAKHGWSQFCAKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLF
        ETEE +  Y   I      K      + FL           F+   I +H W QFCA PE     +VREFYAN+ D E     VRGV V W+  AIN++F
Subjt:  ETEEPQLPYNRFINNFARAKYVEMLRRDFLFERGFGDDLPRFLRTGIAKHGWSQFCAKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLF

Query:  DL
         L
Subjt:  DL

A0A2P5EYL5 Uncharacterized protein9.1e-0839.39Show/hide
Query:  RFINNFARAKYVEMLRRDFL-FERGFGDD------LPRFLRTGIAKHGWSQFCAKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLFDL
        +F +  A A+Y E ++   L  E+GF  +       P F+   I +H W  FCA  E     +VREFYAN+ D E     V+GV V WS  AIN+LF L
Subjt:  RFINNFARAKYVEMLRRDFL-FERGFGDD------LPRFLRTGIAKHGWSQFCAKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLFDL

A0A6A2ZUE4 Uncharacterized protein1.6e-0734.02Show/hide
Query:  FINNFARAKYVEMLRRDFLFERGF------GDDLPRFLRTGIAKHGWSQFCAKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLFDL
        F++  A+  Y  +  R   FE GF        +L   +   + KH W +F   P PVN+ IV+EFY+NI +      +VRG+ + ++P AIN  F L
Subjt:  FINNFARAKYVEMLRRDFLFERGF------GDDLPRFLRTGIAKHGWSQFCAKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLFDL

W9R159 Uncharacterized protein4.5e-0737.18Show/hide
Query:  LRRDFLFERGFGDDLPRFLRTGIAKHGWSQFCAKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLFDL
        + R F++ RG     P F+ + IA H W  FC  P      +VR+FYAN +  E     +RG  + ++  AINSL+DL
Subjt:  LRRDFLFERGFGDDLPRFLRTGIAKHGWSQFCAKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAINSLFDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAGAAGAGGTACCTGTTACCCCTGAGGTACGGAAAACGAATGCAAAGAAAAAGAAAACGTTGGAGGAAAAGGAAGCTAAAAGAAGAAAAAAGGCAACAGAGGGC
TGAGGATCAAGAAATTGTACAGAAAGTAGTAGAGGATATTGCTGTCGTGGTAGTTGAAGAAGGCAATCCGAAGGAACCTGAAGAACAAAACCCAGAGCATATTGAACCCG
ATAGTCGGATACAGAGGAAGTTCAAGAAGAGCACACAGAGGAAGTTCAAGAAAAGCAGACAGAGAATGCGCGAGAGGGACAGACAGACGTTGTGCAGGAAAAAGGGAATG
AGCAAGAGTAGGAGGATCAAGGAAGACAAGGGCAAAGGTATTGTTGAGGCATCGCCAGAACCAGATGATAGTGAAACAGAGGAGCCACAATTACCGTACAATCGCTTCAT
CAATAACTTTGCTAGAGCAAAGTATGTCGAGATGCTGAGAAGAGACTTTTTGTTTGAACGAGGATTTGGCGATGATCTGCCACGGTTCTTGAGGACTGGAATAGCGAAGC
ATGGCTGGAGTCAATTTTGTGCGAAGCCGGAGCCGGTCAATTCCAACATTGTTCGAGAGTTTTATGCAAATATTGATGATCAAGAGGGATTTCAGGCTATCGTCCGAGGA
GTGCCTGTTGACTGGAGCCCAGGAGCTATCAATTCTCTATTCGACCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAAGAAGAGGTACCTGTTACCCCTGAGGTACGGAAAACGAATGCAAAGAAAAAGAAAACGTTGGAGGAAAAGGAAGCTAAAAGAAGAAAAAAGGCAACAGAGGGC
TGAGGATCAAGAAATTGTACAGAAAGTAGTAGAGGATATTGCTGTCGTGGTAGTTGAAGAAGGCAATCCGAAGGAACCTGAAGAACAAAACCCAGAGCATATTGAACCCG
ATAGTCGGATACAGAGGAAGTTCAAGAAGAGCACACAGAGGAAGTTCAAGAAAAGCAGACAGAGAATGCGCGAGAGGGACAGACAGACGTTGTGCAGGAAAAAGGGAATG
AGCAAGAGTAGGAGGATCAAGGAAGACAAGGGCAAAGGTATTGTTGAGGCATCGCCAGAACCAGATGATAGTGAAACAGAGGAGCCACAATTACCGTACAATCGCTTCAT
CAATAACTTTGCTAGAGCAAAGTATGTCGAGATGCTGAGAAGAGACTTTTTGTTTGAACGAGGATTTGGCGATGATCTGCCACGGTTCTTGAGGACTGGAATAGCGAAGC
ATGGCTGGAGTCAATTTTGTGCGAAGCCGGAGCCGGTCAATTCCAACATTGTTCGAGAGTTTTATGCAAATATTGATGATCAAGAGGGATTTCAGGCTATCGTCCGAGGA
GTGCCTGTTGACTGGAGCCCAGGAGCTATCAATTCTCTATTCGACCTCTAA
Protein sequenceShow/hide protein sequence
MRKKRYLLPLRYGKRMQRKRKRWRKRKLKEEKRQQRAEDQEIVQKVVEDIAVVVVEEGNPKEPEEQNPEHIEPDSRIQRKFKKSTQRKFKKSRQRMRERDRQTLCRKKGM
SKSRRIKEDKGKGIVEASPEPDDSETEEPQLPYNRFINNFARAKYVEMLRRDFLFERGFGDDLPRFLRTGIAKHGWSQFCAKPEPVNSNIVREFYANIDDQEGFQAIVRG
VPVDWSPGAINSLFDL