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Lag0035589 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035589
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:24726134..24726502
RNA-Seq ExpressionLag0035589
SyntenyLag0035589
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]4.5e-2140.54Show/hide
Query:  MVKPTTMEFKYATFWLHFCELPMDLYNLSMAERLGNTIGQFQEYDNGGRGFSWKESLRVHIILDITRPFCRGIKGRLDDPLGSIWTPIKYEKLLEICSYS
        + KP  M+F+  + W+HF +L +   N +MA RLGN IG F++ ++    F W   LRV +  D+ +P  RGIK  LD P+G  W PI+YE+L +   + 
Subjt:  MVKPTTMEFKYATFWLHFCELPMDLYNLSMAERLGNTIGQFQEYDNGGRGFSWKESLRVHIILDITRPFCRGIKGRLDDPLGSIWTPIKYEKLLEICSYS

Query:  GRITHVTKDCT
        GR+ H+ KDC+
Subjt:  GRITHVTKDCT

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]6.3e-2347.12Show/hide
Query:  MEFKYATFWLHFCELPMDLYNLSMAERLGNTIGQFQEYDNGGRGFSWKESLRVHIILDITRPFCRGIKGRLDDPLGSIWTPIKYEKLLEICSYSGRITHV
        +EF    FW+H  +LPM   N +MA RLGN IG F + D   +GFSW  SLR+ +++DIT+P  RGIK  +D P+G  W PI+YE+L + C + G I H 
Subjt:  MEFKYATFWLHFCELPMDLYNLSMAERLGNTIGQFQEYDNGGRGFSWKESLRVHIILDITRPFCRGIKGRLDDPLGSIWTPIKYEKLLEICSYSGRITHV

Query:  TKDC
        + DC
Subjt:  TKDC

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]4.4e-1639.6Show/hide
Query:  MVKPTTMEFKYATFWLHFCELPMDLYNLSMAERLGNTIGQFQEYDNGGRGFSWKESLRVHIILDITRPFCRGIKGRLDDPLGSIWTPIKYEKLLEICSYS
        ++ P+ ++F     W+ F +LP+      MA RLGN +G F+E D       W  +LRV ++LDI++P  RGIK  LD P+G  W PI+YE+L + C + 
Subjt:  MVKPTTMEFKYATFWLHFCELPMDLYNLSMAERLGNTIGQFQEYDNGGRGFSWKESLRVHIILDITRPFCRGIKGRLDDPLGSIWTPIKYEKLLEICSYS

Query:  G
        G
Subjt:  G

XP_028071384.1 uncharacterized protein LOC114273772 [Camellia sinensis]1.8e-1433.03Show/hide
Query:  VKPTTMEFKYATFWLHFCELPMDLYNLSMAERLGNTIGQFQEYDNGGRGFSWKESLRVHIILDITRPFCRGIKGRLDDPLGSIWTPIKYEKLLEICSYSG
        V+P+ ++  +  FW+H C LP+ L N  + + +GN +GQF + D    G +W  ++ + + LD+ +P  RG+K  L   +  IW   KYE+L   C + G
Subjt:  VKPTTMEFKYATFWLHFCELPMDLYNLSMAERLGNTIGQFQEYDNGGRGFSWKESLRVHIILDITRPFCRGIKGRLDDPLGSIWTPIKYEKLLEICSYSG

Query:  RITHVTKDC
        R+ H  ++C
Subjt:  RITHVTKDC

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]1.1e-1433.33Show/hide
Query:  VKPTTMEFKYATFWLHFCELPMDLYNLSMAERLGNTIGQFQEYDNGGRGFSWKESLRVHIILDITRPFCRGIKGRLDDPLGSIWTPIKYEKLLEICSYSG
        V+P+ ++     FW+H C LP+ L N  + E +GN +GQF + D    G  W  ++R+ + LD+ +P  RG+K  L      IW   KYE+L   C + G
Subjt:  VKPTTMEFKYATFWLHFCELPMDLYNLSMAERLGNTIGQFQEYDNGGRGFSWKESLRVHIILDITRPFCRGIKGRLDDPLGSIWTPIKYEKLLEICSYSG

Query:  RITHVTKDCTFTFAEYGSSR
        R+ H  ++C    +    SR
Subjt:  RITHVTKDCTFTFAEYGSSR

TrEMBL top hitse value%identityAlignment
A0A2N9EVR9 F-box domain-containing protein1.3e-1333.02Show/hide
Query:  MEFKYATFWLHFCELPMDLYNLSMAERLGNTIGQFQEYDNGGRGFSWKESLRVHIILDITRPFCRGIKGRLDDPLGSIWTPIKYEKLLEICSYSGRITHV
        ++FKY +FW+    +P+   N   A  LG+++G+      GG      +++R+ + +DIT+P CRG + +L+      W   KYE+L   C + G +TH 
Subjt:  MEFKYATFWLHFCELPMDLYNLSMAERLGNTIGQFQEYDNGGRGFSWKESLRVHIILDITRPFCRGIKGRLDDPLGSIWTPIKYEKLLEICSYSGRITHV

Query:  TKDCTF
         KDC F
Subjt:  TKDCTF

A0A2N9F775 Reverse transcriptase domain-containing protein4.4e-1434.23Show/hide
Query:  FKYATFWLHFCELPMDLYNLSMAERLGNTIGQFQEYDNGGRGFSWKESLRVHIILDITRPFCRGIKGRLDDPLGSIWTPIKYEKLLEICSYSGRITHVTK
        F + +FW+   +LP+ +   +   R+G+T+G  ++ ++ G G S    +R+ +I+DI +P CRG K  L   +G  W   +YE+L   C + GRITH  K
Subjt:  FKYATFWLHFCELPMDLYNLSMAERLGNTIGQFQEYDNGGRGFSWKESLRVHIILDITRPFCRGIKGRLDDPLGSIWTPIKYEKLLEICSYSGRITHVTK

Query:  DCTFTFAEYGS
        DC       GS
Subjt:  DCTFTFAEYGS

A0A6J1BSZ1 uncharacterized protein LOC1110054812.2e-2140.54Show/hide
Query:  MVKPTTMEFKYATFWLHFCELPMDLYNLSMAERLGNTIGQFQEYDNGGRGFSWKESLRVHIILDITRPFCRGIKGRLDDPLGSIWTPIKYEKLLEICSYS
        + KP  M+F+  + W+HF +L +   N +MA RLGN IG F++ ++    F W   LRV +  D+ +P  RGIK  LD P+G  W PI+YE+L +   + 
Subjt:  MVKPTTMEFKYATFWLHFCELPMDLYNLSMAERLGNTIGQFQEYDNGGRGFSWKESLRVHIILDITRPFCRGIKGRLDDPLGSIWTPIKYEKLLEICSYS

Query:  GRITHVTKDCT
        GR+ H+ KDC+
Subjt:  GRITHVTKDCT

A0A6J1DU55 uncharacterized protein LOC1110231353.1e-2347.12Show/hide
Query:  MEFKYATFWLHFCELPMDLYNLSMAERLGNTIGQFQEYDNGGRGFSWKESLRVHIILDITRPFCRGIKGRLDDPLGSIWTPIKYEKLLEICSYSGRITHV
        +EF    FW+H  +LPM   N +MA RLGN IG F + D   +GFSW  SLR+ +++DIT+P  RGIK  +D P+G  W PI+YE+L + C + G I H 
Subjt:  MEFKYATFWLHFCELPMDLYNLSMAERLGNTIGQFQEYDNGGRGFSWKESLRVHIILDITRPFCRGIKGRLDDPLGSIWTPIKYEKLLEICSYSGRITHV

Query:  TKDC
        + DC
Subjt:  TKDC

A0A6J1DX30 uncharacterized protein LOC1110248742.1e-1639.6Show/hide
Query:  MVKPTTMEFKYATFWLHFCELPMDLYNLSMAERLGNTIGQFQEYDNGGRGFSWKESLRVHIILDITRPFCRGIKGRLDDPLGSIWTPIKYEKLLEICSYS
        ++ P+ ++F     W+ F +LP+      MA RLGN +G F+E D       W  +LRV ++LDI++P  RGIK  LD P+G  W PI+YE+L + C + 
Subjt:  MVKPTTMEFKYATFWLHFCELPMDLYNLSMAERLGNTIGQFQEYDNGGRGFSWKESLRVHIILDITRPFCRGIKGRLDDPLGSIWTPIKYEKLLEICSYS

Query:  G
        G
Subjt:  G

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAGCCTACGACCATGGAATTCAAATATGCAACTTTCTGGTTGCATTTTTGTGAACTACCAATGGACCTTTATAACTTATCGATGGCAGAACGCTTGGGCAACAC
AATTGGTCAATTCCAGGAGTATGACAATGGAGGGCGAGGATTCAGCTGGAAGGAGAGTCTTCGAGTGCACATTATTCTTGACATTACAAGGCCCTTTTGTCGTGGTATCA
AGGGTCGGCTTGACGATCCTTTGGGTAGCATTTGGACTCCTATCAAGTATGAGAAGTTGCTGGAAATTTGTTCGTATTCTGGCCGGATCACACATGTTACAAAGGACTGC
ACGTTCACATTTGCAGAGTATGGTTCATCCCGACGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAGCCTACGACCATGGAATTCAAATATGCAACTTTCTGGTTGCATTTTTGTGAACTACCAATGGACCTTTATAACTTATCGATGGCAGAACGCTTGGGCAACAC
AATTGGTCAATTCCAGGAGTATGACAATGGAGGGCGAGGATTCAGCTGGAAGGAGAGTCTTCGAGTGCACATTATTCTTGACATTACAAGGCCCTTTTGTCGTGGTATCA
AGGGTCGGCTTGACGATCCTTTGGGTAGCATTTGGACTCCTATCAAGTATGAGAAGTTGCTGGAAATTTGTTCGTATTCTGGCCGGATCACACATGTTACAAAGGACTGC
ACGTTCACATTTGCAGAGTATGGTTCATCCCGACGATAA
Protein sequenceShow/hide protein sequence
MVKPTTMEFKYATFWLHFCELPMDLYNLSMAERLGNTIGQFQEYDNGGRGFSWKESLRVHIILDITRPFCRGIKGRLDDPLGSIWTPIKYEKLLEICSYSGRITHVTKDC
TFTFAEYGSSRR