; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035600 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035600
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationchr3:24989370..24990672
RNA-Seq ExpressionLag0035600
SyntenyLag0035600
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]3.3e-4528.95Show/hide
Query:  QGDRRRMHWKRWEELCKPKEDGGLNFRDLVSFNQAIIAK--------------KFIKH------------------------------------------
        +G+ R++HW +W  +C PKE GGLNFRDL  FNQA++AK              K +KH                                          
Subjt:  QGDRRRMHWKRWEELCKPKEDGGLNFRDLVSFNQAIIAK--------------KFIKH------------------------------------------

Query:  -------------------------------------NCQWDLEKLDQHLDRVDVDVIKSLPISSH-APNRWIWHYDRKGEYSVRSGYKLCIR---DGRE
                                             +  WD+  +       D D+I S+PISS+   + W+WHYD++G YSVRSGYKL +    +   
Subjt:  -------------------------------------NCQWDLEKLDQHLDRVDVDVIKSLPISSH-APNRWIWHYDRKGEYSVRSGYKLCIR---DGRE

Query:  TSLSYSGVEYSWWINLWKLRVPSKVKHFVWRSFHNSIPTMVNLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEVWKTLF-LAGVGNGWDPMEIKDRW
         S +Y G +   W ++WKL VP+K+K F+WRS H  IPT  NLL   +     C +C +  E++ HA F C RA+++W+TLF      +  D +   + W
Subjt:  TSLSYSGVEYSWWINLWKLRVPSKVKHFVWRSFHNSIPTMVNLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEVWKTLF-LAGVGNGWDPMEIKDRW

Query:  MWLSRTNGPL-LERICVGAWVIWNDKNNLVHNCPIPSVNLRCEWINSYLEEYWQANPKG---------KPCVQTEEDISNTICNGEDFILHTDAAFMGGS
          L+    P  L    +  W IWND+N+L+H   +  V  +CEW+  +L+ + QA             +P VQ     S+         L+TDAA  G S
Subjt:  MWLSRTNGPL-LERICVGAWVIWNDKNNLVHNCPIPSVNLRCEWINSYLEEYWQANPKG---------KPCVQTEEDISNTICNGEDFILHTDAAFMGGS

Query:  CGSGIGLVLRN
          +  G ++R+
Subjt:  CGSGIGLVLRN

XP_030478414.1 uncharacterized protein LOC115695490 [Cannabis sativa]6.8e-4332.65Show/hide
Query:  MGCFRIPKGILSKITTLCSRFWWGSQGDRRRMHWKRWEELCKPKEDGGLNFRDLVSFNQAIIAKK---FIKHNCQWDLEKLDQHLDRVDVDVIKSLPIS-
        M CF++ K ++ +I T+C++FWWGS      ++WK W+ L + K  G  +F+ LV FN   I  K    I ++ QWD +KL       DV  I SLP++ 
Subjt:  MGCFRIPKGILSKITTLCSRFWWGSQGDRRRMHWKRWEELCKPKEDGGLNFRDLVSFNQAIIAKK---FIKHNCQWDLEKLDQHLDRVDVDVIKSLPIS-

Query:  SHAPNRWIWHYDRKGEYSVRSGYKLCIRDGRETSLSYSGVE-YSWWINLWKLRVPSKVKHFVWRSFHNSIPTMVNLLNHHVSVNVVCPLCKEENETMDHA
        +   ++ IWH+D  G Y+V+SGYKL   D  E   + S ++   WW   WK++VPSK++ F+ R+ H+ +P    L   H+S    C LC    ET+ HA
Subjt:  SHAPNRWIWHYDRKGEYSVRSGYKLCIRDGRETSLSYSGVE-YSWWINLWKLRVPSKVKHFVWRSFHNSIPTMVNLLNHHVSVNVVCPLCKEENETMDHA

Query:  LFLCDRAQEVWKTLFLAGVGNGWDPMEIKDRWMWLSRT-NGPLLERICVGAWVIWNDKNNLVHNCPIPSVNLRCEWINSYLEEYWQANPKGKPCVQTEED
        LF C RA++VW+T     V      M++ + ++ +S   +  LLE+     W IW ++    H       ++   +  SYLE+Y  A     P   T   
Subjt:  LFLCDRAQEVWKTLFLAGVGNGWDPMEIKDRWMWLSRT-NGPLLERICVGAWVIWNDKNNLVHNCPIPSVNLRCEWINSYLEEYWQANPKGKPCVQTEED

Query:  ISNTICNGE---------DFILHTDAAFMGGSCGSGIGLVLRN
          ++  N              L+TDAA    +  SG G VL N
Subjt:  ISNTICNGE---------DFILHTDAAFMGGSCGSGIGLVLRN

XP_030479133.1 uncharacterized protein LOC115696372 [Cannabis sativa]7.8e-4727.61Show/hide
Query:  MGCFRIPKGILSKITTLCSRFWWGSQGDRRRMHWKRWEELCKPKEDGGLNFRDLVSFNQAIIAKK-----------------------------------
        M CFR+P  + ++I  + ++FWWGS  D +++HWK+W  LCK K DGG+ FR  V FNQA++AK+                                   
Subjt:  MGCFRIPKGILSKITTLCSRFWWGSQGDRRRMHWKRWEELCKPKEDGGLNFRDLVSFNQAIIAKK-----------------------------------

Query:  ---------------------------------------------------------FIKHNCQWDLEKLDQHLDRVDVDVIKSLPISSHAPN-RWIWHY
                                                                 +I    +W++E L       DVD I  +P+S    N RWIWHY
Subjt:  ---------------------------------------------------------FIKHNCQWDLEKLDQHLDRVDVDVIKSLPISSHAPN-RWIWHY

Query:  DRKGEYSVRSGYKLCIRDGRETSLSYSGVEYSWWINLWKLRVPSKVKHFVWRSFHNSIPTMVNLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEVWK
        +  G+YSV SGY L    G E   S S  + +WW + WKL +PSKVK F W+   +SIP   +L +  +  +  C LC+   E++ HALF C  A+EVWK
Subjt:  DRKGEYSVRSGYKLCIRDGRETSLSYSGVEYSWWINLWKLRVPSKVKHFVWRSFHNSIPTMVNLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEVWK

Query:  TLFLAGVGNGWDPMEIKDRWMWLSRT-NGPLLERICVGAWVIWNDKNNLVHNCPIPSVNLRCEWINSYLEEYWQANPKGKPCVQTEEDISNTIC----NG
            +      D ++  D  M LS        E I    W IW+D+NN +H   + +         +Y+++Y        P        ++         
Subjt:  TLFLAGVGNGWDPMEIKDRWMWLSRT-NGPLLERICVGAWVIWNDKNNLVHNCPIPSVNLRCEWINSYLEEYWQANPKGKPCVQTEEDISNTIC----NG

Query:  EDFILHTDAAFMGGSCGSGIGLVLRNKFDQL
          F L+ DAA        GIG+++RN   Q+
Subjt:  EDFILHTDAAFMGGSCGSGIGLVLRNKFDQL

XP_030483481.1 uncharacterized protein LOC115700065 [Cannabis sativa]6.8e-4326.33Show/hide
Query:  MGCFRIPKGILSKITTLCSRFWWGSQGDRRRMHWKRWEELCKPKEDGGLNFRDLVSFNQAIIAK-------------------KFIKHNC----------
        M CF++P  + +++ T+ S FWWGS  +  ++HW+ W+ LCK K DGG+ FR  + +NQA++AK                   ++  HN           
Subjt:  MGCFRIPKGILSKITTLCSRFWWGSQGDRRRMHWKRWEELCKPKEDGGLNFRDLVSFNQAIIAK-------------------KFIKHNC----------

Query:  ---------------------------------------------------------------QWDLEKLDQHLDRVDVDVIKSLPISSHAPN-RWIWHY
                                                                       QW+ + LD+    +DVD I ++P+S  + N   IWHY
Subjt:  ---------------------------------------------------------------QWDLEKLDQHLDRVDVDVIKSLPISSHAPN-RWIWHY

Query:  DRKGEYSVRSGYK--LCIRDGRETSLSYSGVEYSWWINLWKLRVPSKVKHFVWRSFHNSIPTMVNLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEV
           G Y V SGY     + D   +S S S    +WW   WKL++P K+K F WR FH+++P   +L+  H+  +  C +C++  E++ HALF C  A+ V
Subjt:  DRKGEYSVRSGYK--LCIRDGRETSLSYSGVEYSWWINLWKLRVPSKVKHFVWRSFHNSIPTMVNLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEV

Query:  WKTLFLAGVGNGWDPMEIKDRWMWLSRTNGPL-LERICVGAWVIWNDKNNLVHNCPIPSVNLRCEWINSYLEEYWQANPKGKPCVQTEED------ISNT
        W+        N    M   D  ++LS  +  L +E I    W IW ++N ++H     S  L   +  +YL  Y  A  K +P   T         + ++
Subjt:  WKTLFLAGVGNGWDPMEIKDRWMWLSRTNGPL-LERICVGAWVIWNDKNNLVHNCPIPSVNLRCEWINSYLEEYWQANPKGKPCVQTEED------ISNT

Query:  ICNGED---FILHTDAAFMGGSCGSGIGLVLRN
             D     ++ DAA    +   GIG V+RN
Subjt:  ICNGED---FILHTDAAFMGGSCGSGIGLVLRN

XP_030505962.1 uncharacterized protein LOC115720894 [Cannabis sativa]6.6e-4629.4Show/hide
Query:  MGCFRIPKGILSKITTLCSRFWWGSQGDRRRMHWKRWEELCKPKEDGGLNF-RDLV---------------------------------SFNQAIIAKKF
        M CF++P     ++  + + FWWGS  D+++ HW++W+ LCK K DGG+ + RDL+                                 S +   +   +
Subjt:  MGCFRIPKGILSKITTLCSRFWWGSQGDRRRMHWKRWEELCKPKEDGGLNF-RDLV---------------------------------SFNQAIIAKKF

Query:  IKHNCQWDLEKLDQHLDRVDVDVIKSLPI-SSHAPNRWIWHYDRKGEYSVRSGYKLCIRDGRETSLSYSGVEYSWWINLWKLRVPSKVKHFVWRSFHNSI
        I  + +W+L  L      VD+D I S+P+ SSH  ++WIWH+    EY+V++GY L          + S  ++SWW   W L++PSKVK FVW++FH +I
Subjt:  IKHNCQWDLEKLDQHLDRVDVDVIKSLPI-SSHAPNRWIWHYDRKGEYSVRSGYKLCIRDGRETSLSYSGVEYSWWINLWKLRVPSKVKHFVWRSFHNSI

Query:  PTMVNLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEVWKTLFLAGVGNGWD---PMEIKDRWMWLS--RTNGPLLERICVGAWVIWNDKNNLVHNCP
        PT  +L N  +  +  C LC    E++ HAL LC  A++VW +   AG    +D    M+  D  + LS  +T   + +  C   W +W D+NN +H  P
Subjt:  PTMVNLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEVWKTLFLAGVGNGWD---PMEIKDRWMWLS--RTNGPLLERICVGAWVIWNDKNNLVHNCP

Query:  IPSVNLRCEWINSYLEEYWQANPKGKPCVQTEEDISNTICNGEDFI--------LHTDAAFMGGSCGSGIGLVLRNKFDQL
        + S +    W  S     +  N +    +Q    IS        +I        ++ DAA        G+G+++RN   Q+
Subjt:  IPSVNLRCEWINSYLEEYWQANPKGKPCVQTEEDISNTICNGEDFI--------LHTDAAFMGGSCGSGIGLVLRNKFDQL

TrEMBL top hitse value%identityAlignment
A0A6J1DX30 uncharacterized protein LOC1110248741.6e-4528.95Show/hide
Query:  QGDRRRMHWKRWEELCKPKEDGGLNFRDLVSFNQAIIAK--------------KFIKH------------------------------------------
        +G+ R++HW +W  +C PKE GGLNFRDL  FNQA++AK              K +KH                                          
Subjt:  QGDRRRMHWKRWEELCKPKEDGGLNFRDLVSFNQAIIAK--------------KFIKH------------------------------------------

Query:  -------------------------------------NCQWDLEKLDQHLDRVDVDVIKSLPISSH-APNRWIWHYDRKGEYSVRSGYKLCIR---DGRE
                                             +  WD+  +       D D+I S+PISS+   + W+WHYD++G YSVRSGYKL +    +   
Subjt:  -------------------------------------NCQWDLEKLDQHLDRVDVDVIKSLPISSH-APNRWIWHYDRKGEYSVRSGYKLCIR---DGRE

Query:  TSLSYSGVEYSWWINLWKLRVPSKVKHFVWRSFHNSIPTMVNLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEVWKTLF-LAGVGNGWDPMEIKDRW
         S +Y G +   W ++WKL VP+K+K F+WRS H  IPT  NLL   +     C +C +  E++ HA F C RA+++W+TLF      +  D +   + W
Subjt:  TSLSYSGVEYSWWINLWKLRVPSKVKHFVWRSFHNSIPTMVNLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEVWKTLF-LAGVGNGWDPMEIKDRW

Query:  MWLSRTNGPL-LERICVGAWVIWNDKNNLVHNCPIPSVNLRCEWINSYLEEYWQANPKG---------KPCVQTEEDISNTICNGEDFILHTDAAFMGGS
          L+    P  L    +  W IWND+N+L+H   +  V  +CEW+  +L+ + QA             +P VQ     S+         L+TDAA  G S
Subjt:  MWLSRTNGPL-LERICVGAWVIWNDKNNLVHNCPIPSVNLRCEWINSYLEEYWQANPKG---------KPCVQTEEDISNTICNGEDFILHTDAAFMGGS

Query:  CGSGIGLVLRN
          +  G ++R+
Subjt:  CGSGIGLVLRN

A0A803NI87 Uncharacterized protein3.2e-4629.4Show/hide
Query:  MGCFRIPKGILSKITTLCSRFWWGSQGDRRRMHWKRWEELCKPKEDGGLNF-RDLV---------------------------------SFNQAIIAKKF
        M CF++P     ++  + + FWWGS  D+++ HW++W+ LCK K DGG+ + RDL+                                 S +   +   +
Subjt:  MGCFRIPKGILSKITTLCSRFWWGSQGDRRRMHWKRWEELCKPKEDGGLNF-RDLV---------------------------------SFNQAIIAKKF

Query:  IKHNCQWDLEKLDQHLDRVDVDVIKSLPI-SSHAPNRWIWHYDRKGEYSVRSGYKLCIRDGRETSLSYSGVEYSWWINLWKLRVPSKVKHFVWRSFHNSI
        I  + +W+L  L      VD+D I S+P+ SSH  ++WIWH+    EY+V++GY L          + S  ++SWW   W L++PSKVK FVW++FH +I
Subjt:  IKHNCQWDLEKLDQHLDRVDVDVIKSLPI-SSHAPNRWIWHYDRKGEYSVRSGYKLCIRDGRETSLSYSGVEYSWWINLWKLRVPSKVKHFVWRSFHNSI

Query:  PTMVNLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEVWKTLFLAGVGNGWD---PMEIKDRWMWLS--RTNGPLLERICVGAWVIWNDKNNLVHNCP
        PT  +L N  +  +  C LC    E++ HAL LC  A++VW +   AG    +D    M+  D  + LS  +T   + +  C   W +W D+NN +H  P
Subjt:  PTMVNLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEVWKTLFLAGVGNGWD---PMEIKDRWMWLS--RTNGPLLERICVGAWVIWNDKNNLVHNCP

Query:  IPSVNLRCEWINSYLEEYWQANPKGKPCVQTEEDISNTICNGEDFI--------LHTDAAFMGGSCGSGIGLVLRNKFDQL
        + S +    W  S     +  N +    +Q    IS        +I        ++ DAA        G+G+++RN   Q+
Subjt:  IPSVNLRCEWINSYLEEYWQANPKGKPCVQTEEDISNTICNGEDFI--------LHTDAAFMGGSCGSGIGLVLRNKFDQL

A0A803PIN0 Uncharacterized protein4.9e-4731.38Show/hide
Query:  CFRIPKGILSKITTLCSRFWWGSQGDRRRMHWKRWEELCKPKEDGGLNFRDLVSFNQAIIAK-------------------KFIKHNC------------
        CF++P  + +++ T+ S+FWWGS  +  ++HW+ W+ LCK K DGG+ FR  + +NQA++AK                   ++  HN             
Subjt:  CFRIPKGILSKITTLCSRFWWGSQGDRRRMHWKRWEELCKPKEDGGLNFRDLVSFNQAIIAK-------------------KFIKHNC------------

Query:  -----QWDLEKLDQHLDRVDVDVIKSLPISSHAPN-RWIWHYDRKGEYSVRSGYK--LCIRDGRETSLSYSGVEYSWWINLWKLRVPSKVKHFVWRSFHN
             QW+ + LD++   +DVD I ++P+S    N   IWH+   G Y+V SGY     + D   +S S S    +WW   WKL++P K+K F WR FH+
Subjt:  -----QWDLEKLDQHLDRVDVDVIKSLPISSHAPN-RWIWHYDRKGEYSVRSGYK--LCIRDGRETSLSYSGVEYSWWINLWKLRVPSKVKHFVWRSFHN

Query:  SIPTMVNLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEVWKTLFLAGVGNGWDPMEIKDRWMWLSRTNGPL-LERICVGAWVIWNDKNNLVHNCPIP
        ++P   +L+  H+  +  C +C++  E++ HALF C  A+ VW+        N    M   D  + LS  +  L +E I    W IW ++N ++H     
Subjt:  SIPTMVNLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEVWKTLFLAGVGNGWDPMEIKDRWMWLSRTNGPL-LERICVGAWVIWNDKNNLVHNCPIP

Query:  SVNLRCEWINSYLEEYWQANPKGKP
        SV L   +  +YL  Y  A  K +P
Subjt:  SVNLRCEWINSYLEEYWQANPKGKP

A0A803QAH8 Uncharacterized protein1.2e-4531.25Show/hide
Query:  MGCFRIPKGILSKITTLCSRFWWGSQGDRRRMHWKRWEELCKPKEDGGLNFRDLVSFNQAIIAKK-----------------------------------
        M CF++P     +I +L S FWWGS  D++++HWK+W+ LCK K +GGL FR+ + FNQA++AK+                                   
Subjt:  MGCFRIPKGILSKITTLCSRFWWGSQGDRRRMHWKRWEELCKPKEDGGLNFRDLVSFNQAIIAKK-----------------------------------

Query:  --------------------------FIKHNCQWDLEKLDQHLDRVDVDVIKSLPISSHA-PNRWIWHYDRKGEYSVRSGYKLCIRDGRETSLSYSGVEY
                                  +I    +W++ KL+      DV+ I SLP+S HA  + W+WH  R G+Y V+SGY +      ET +S S    
Subjt:  --------------------------FIKHNCQWDLEKLDQHLDRVDVDVIKSLPISSHA-PNRWIWHYDRKGEYSVRSGYKLCIRDGRETSLSYSGVEY

Query:  SWWINLWKLRVPSKVKHFVWRSFHNSIPTMVNLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEVWKTLFLAGVGNGWDPMEIKDRWMWLSRT-NGPL
        SWW + W+L++P KVK F W++ HN++P    L       +  C LC    E++ HA+F C  A+ VWK +  +        M+I+D    +S       
Subjt:  SWWINLWKLRVPSKVKHFVWRSFHNSIPTMVNLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEVWKTLFLAGVGNGWDPMEIKDRWMWLSRT-NGPL

Query:  LERICVGAWVIWNDKNNLVH
        LE I    W IW+D+NN++H
Subjt:  LERICVGAWVIWNDKNNLVH

A0A803QGT2 Uncharacterized protein3.8e-4727.61Show/hide
Query:  MGCFRIPKGILSKITTLCSRFWWGSQGDRRRMHWKRWEELCKPKEDGGLNFRDLVSFNQAIIAKK-----------------------------------
        M CFR+P  + ++I  + ++FWWGS  D +++HWK+W  LCK K DGG+ FR  V FNQA++AK+                                   
Subjt:  MGCFRIPKGILSKITTLCSRFWWGSQGDRRRMHWKRWEELCKPKEDGGLNFRDLVSFNQAIIAKK-----------------------------------

Query:  ---------------------------------------------------------FIKHNCQWDLEKLDQHLDRVDVDVIKSLPISSHAPN-RWIWHY
                                                                 +I    +W++E L       DVD I  +P+S    N RWIWHY
Subjt:  ---------------------------------------------------------FIKHNCQWDLEKLDQHLDRVDVDVIKSLPISSHAPN-RWIWHY

Query:  DRKGEYSVRSGYKLCIRDGRETSLSYSGVEYSWWINLWKLRVPSKVKHFVWRSFHNSIPTMVNLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEVWK
        +  G+YSV SGY L    G E   S S  + +WW + WKL +PSKVK F W+   +SIP   +L +  +  +  C LC+   E++ HALF C  A+EVWK
Subjt:  DRKGEYSVRSGYKLCIRDGRETSLSYSGVEYSWWINLWKLRVPSKVKHFVWRSFHNSIPTMVNLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEVWK

Query:  TLFLAGVGNGWDPMEIKDRWMWLSRT-NGPLLERICVGAWVIWNDKNNLVHNCPIPSVNLRCEWINSYLEEYWQANPKGKPCVQTEEDISNTIC----NG
            +      D ++  D  M LS        E I    W IW+D+NN +H   + +         +Y+++Y        P        ++         
Subjt:  TLFLAGVGNGWDPMEIKDRWMWLSRT-NGPLLERICVGAWVIWNDKNNLVHNCPIPSVNLRCEWINSYLEEYWQANPKGKPCVQTEEDISNTIC----NG

Query:  EDFILHTDAAFMGGSCGSGIGLVLRNKFDQL
          F L+ DAA        GIG+++RN   Q+
Subjt:  EDFILHTDAAFMGGSCGSGIGLVLRNKFDQL

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657501.6e-1028.48Show/hide
Query:  IIAKKFIKHNCQWDLEKLDQHL---DRVDVDVIKSLPISSHAPNRWIWHYDRKGEYSVRSGYKLCIRD--GRETSLSYSGVEYSWWINLWKLRVPSKVKH
        ++AK        WD  K+D +     R+++  +  L + + A +R  W + + G++SVRS Y++   D   R    S+          LWK+RVP +VK 
Subjt:  IIAKKFIKHNCQWDLEKLDQHL---DRVDVDVIKSLPISSHAPNRWIWHYDRKGEYSVRSGYKLCIRD--GRETSLSYSGVEYSWWINLWKLRVPSKVKH

Query:  FVWRSFHNSIPTMVNLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEVW
        F+W   + ++ T       H+S + VC +CK   E+M H L  C     +W
Subjt:  FVWRSFHNSIPTMVNLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEVW

P93295 Uncharacterized mitochondrial protein AtMg003109.1e-1450Show/hide
Query:  MGCFRIPKGILSKITTLCSRFWWGSQGDRRRMHWKRWEELCKPKE-DGGLNFRDLVSFNQAIIAKK
        M CFR+ K +  K+T+  + FWW S  ++R++ W  W++LCK KE DGGL FRDL  FNQA++AK+
Subjt:  MGCFRIPKGILSKITTLCSRFWWGSQGDRRRMHWKRWEELCKPKE-DGGLNFRDLVSFNQAIIAKK

Arabidopsis top hitse value%identityAlignment
AT2G02650.1 Ribonuclease H-like superfamily protein4.6e-1328.97Show/hide
Query:  LWKLRVPSKVKHFVWRSFHNSIPTMVNLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEVWKTLFLAGVGNGWDP----MEIKDRWMWLSRTNGP-LL
        +WKL V  K+KHF+WR    ++ T   L + ++  + +C  C  E ET+ H +F C   Q VW++  +  +GN W P     +  +R + LS+T     L
Subjt:  LWKLRVPSKVKHFVWRSFHNSIPTMVNLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEVWKTLFLAGVGNGWDP----MEIKDRWMWLSRTNGP-LL

Query:  ERICVG--AWVIWNDKNNLV--HNCPIPSVNLR------CEWINS
        +R       W +W  +N  +    C  P    R       EW+N+
Subjt:  ERICVG--AWVIWNDKNNLV--HNCPIPSVNLR------CEWINS

AT3G09510.1 Ribonuclease H-like superfamily protein1.6e-1832.61Show/hide
Query:  WDLEKLDQHLDRVDVDVIKSLPIS-SHAPNRWIWHYDRKGEYSVRSGYKLCIRDGRET--SLSYSGVEYSWWINLWKLRVPSKVKHFVWRSFHNSIPTMV
        WD  K+ Q +D+ D   I  + ++ S  P++ IW+Y+  GEY+VRSGY L   D      +++           +W L +  K+KHF+WR+   ++ T  
Subjt:  WDLEKLDQHLDRVDVDVIKSLPIS-SHAPNRWIWHYDRKGEYSVRSGYKLCIRDGRET--SLSYSGVEYSWWINLWKLRVPSKVKHFVWRSFHNSIPTMV

Query:  NLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEVWK
         L    + ++  CP C  ENE+++HALF C  A   W+
Subjt:  NLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEVWK

AT3G25270.1 Ribonuclease H-like superfamily protein4.8e-1030.08Show/hide
Query:  LWKLRVPSKVKHFVWRSFHNSIPTMVNLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEVWKT-------LFLAGVGNGWDPMEIKDRWMWLS--RTN
        +WKL+   K+KHF+W+    ++ T  NL   H+  +  C  C +E+ET  H  F C  AQ+VW+        L   G+      ME K   +  S     
Subjt:  LWKLRVPSKVKHFVWRSFHNSIPTMVNLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEVWKT-------LFLAGVGNGWDPMEIKDRWMWLS--RTN

Query:  GPLLERICVG-AWVIWNDKNNLV
         P L  + +   W +W  +N LV
Subjt:  GPLLERICVG-AWVIWNDKNNLV

AT4G29090.1 Ribonuclease H-like superfamily protein4.9e-2321.7Show/hide
Query:  MGCFRIPKGILSKITTLCSRFWWGSQGDRRRMHWKRWEELCKPKEDGGLNFRDLVSFNQAIIAKKFIK--------------------------------
        M CF +PK +  +I ++ + FWW ++ + + MHWK W+ L   K +GG+ F+D+ +FN A++ K+  +                                
Subjt:  MGCFRIPKGILSKITTLCSRFWWGSQGDRRRMHWKRWEELCKPKEDGGLNFRDLVSFNQAIIAKKFIK--------------------------------

Query:  -------HNCQ-------------------WDLEKLDQH-------------------------LDRVD-------VDVIKSL-------------PISS
               H  Q                   W  + LD                            D +D        DVI+ L             P   
Subjt:  -------HNCQ-------------------WDLEKLDQH-------------------------LDRVD-------VDVIKSL-------------PISS

Query:  HAPNRWIWHYDRKGEYSVRSGYKLCIRDGRETSLSYSGVEYSW---WINLWKLRVPSKVKHFVWRSFHNSIPTMVNLLNHHVSVNVVCPLCKEENETMDH
           + + W Y   G+Y+V+SGY +  +   + S      E S    +  +WK +   K++HF+W+   NS+P    L   H+S    C  C    ET++H
Subjt:  HAPNRWIWHYDRKGEYSVRSGYKLCIRDGRETSLSYSGVEYSW---WINLWKLRVPSKVKHFVWRSFHNSIPTMVNLLNHHVSVNVVCPLCKEENETMDH

Query:  ALFLCDRAQEVWKTLFL-AGVGNGW-DPMEIKDRWMWLSRTNGPLLER----ICVGAWVIWNDKNNLVHNCPIPSVNLRCEWINSYLEEYWQANPKGKPC
         LF C  A+  W    +   +G  W D + +   W++      P  E+    +    W +W ++N LV      +           LEE W+   + + C
Subjt:  ALFLCDRAQEVWKTLFL-AGVGNGW-DPMEIKDRWMWLSRTNGPLLER----ICVGAWVIWNDKNNLVHNCPIPSVNLRCEWINSYLEEYWQANPKGKPC

Query:  VQTEEDISNTICN------GEDFILHTDAAFMGGSCGSGIGLVLRNK
          T+  ++ + C        +    +TDA +   +   GIG VLRN+
Subjt:  VQTEEDISNTICN------GEDFILHTDAAFMGGSCGSGIGLVLRNK

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein6.4e-1550Show/hide
Query:  MGCFRIPKGILSKITTLCSRFWWGSQGDRRRMHWKRWEELCKPKE-DGGLNFRDLVSFNQAIIAKK
        M CFR+ K +  K+T+  + FWW S  ++R++ W  W++LCK KE DGGL FRDL  FNQA++AK+
Subjt:  MGCFRIPKGILSKITTLCSRFWWGSQGDRRRMHWKRWEELCKPKE-DGGLNFRDLVSFNQAIIAKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATGTTTCAGGATCCCCAAAGGAATCTTATCAAAGATCACGACCCTTTGTTCCAGATTTTGGTGGGGGTCCCAGGGGGATAGAAGGAGGATGCACTGGAAAAGATG
GGAAGAGCTATGCAAACCAAAGGAGGATGGGGGTTTAAACTTTCGTGATCTGGTTTCTTTCAACCAGGCGATTATTGCTAAGAAGTTTATAAAGCATAACTGCCAATGGG
ACTTGGAGAAACTTGACCAACACCTGGATAGGGTGGATGTTGATGTGATCAAAAGTCTTCCGATAAGTAGTCATGCCCCAAACAGATGGATCTGGCATTATGATAGGAAA
GGGGAGTACTCGGTGAGAAGTGGTTACAAGCTCTGTATAAGGGATGGTCGAGAGACGTCGTTATCATATAGTGGGGTGGAGTATAGTTGGTGGATTAATCTATGGAAATT
GAGAGTTCCTAGTAAGGTGAAACATTTTGTATGGAGATCTTTCCATAATTCAATTCCAACTATGGTTAATCTATTGAATCATCATGTTTCGGTTAATGTGGTTTGTCCTC
TGTGTAAGGAGGAGAATGAAACTATGGATCATGCCCTTTTCTTGTGTGATCGAGCCCAAGAGGTTTGGAAGACCCTTTTTCTGGCAGGGGTTGGGAATGGTTGGGATCCT
ATGGAGATTAAAGATAGATGGATGTGGTTGAGTAGGACAAATGGACCACTCTTAGAGCGTATTTGTGTAGGTGCCTGGGTAATCTGGAATGATAAAAATAATCTAGTGCA
CAATTGTCCAATCCCTTCTGTCAATTTGCGATGTGAATGGATAAATTCCTATTTGGAGGAATATTGGCAGGCAAACCCAAAGGGGAAACCATGTGTGCAAACAGAGGAGG
ACATCTCCAACACTATTTGTAATGGGGAAGATTTCATACTTCATACGGATGCGGCATTCATGGGTGGCTCTTGTGGTAGTGGAATTGGTCTAGTTCTTCGGAATAAATTC
GACCAACTATACAGGCAGCACAATCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGATGTTTCAGGATCCCCAAAGGAATCTTATCAAAGATCACGACCCTTTGTTCCAGATTTTGGTGGGGGTCCCAGGGGGATAGAAGGAGGATGCACTGGAAAAGATG
GGAAGAGCTATGCAAACCAAAGGAGGATGGGGGTTTAAACTTTCGTGATCTGGTTTCTTTCAACCAGGCGATTATTGCTAAGAAGTTTATAAAGCATAACTGCCAATGGG
ACTTGGAGAAACTTGACCAACACCTGGATAGGGTGGATGTTGATGTGATCAAAAGTCTTCCGATAAGTAGTCATGCCCCAAACAGATGGATCTGGCATTATGATAGGAAA
GGGGAGTACTCGGTGAGAAGTGGTTACAAGCTCTGTATAAGGGATGGTCGAGAGACGTCGTTATCATATAGTGGGGTGGAGTATAGTTGGTGGATTAATCTATGGAAATT
GAGAGTTCCTAGTAAGGTGAAACATTTTGTATGGAGATCTTTCCATAATTCAATTCCAACTATGGTTAATCTATTGAATCATCATGTTTCGGTTAATGTGGTTTGTCCTC
TGTGTAAGGAGGAGAATGAAACTATGGATCATGCCCTTTTCTTGTGTGATCGAGCCCAAGAGGTTTGGAAGACCCTTTTTCTGGCAGGGGTTGGGAATGGTTGGGATCCT
ATGGAGATTAAAGATAGATGGATGTGGTTGAGTAGGACAAATGGACCACTCTTAGAGCGTATTTGTGTAGGTGCCTGGGTAATCTGGAATGATAAAAATAATCTAGTGCA
CAATTGTCCAATCCCTTCTGTCAATTTGCGATGTGAATGGATAAATTCCTATTTGGAGGAATATTGGCAGGCAAACCCAAAGGGGAAACCATGTGTGCAAACAGAGGAGG
ACATCTCCAACACTATTTGTAATGGGGAAGATTTCATACTTCATACGGATGCGGCATTCATGGGTGGCTCTTGTGGTAGTGGAATTGGTCTAGTTCTTCGGAATAAATTC
GACCAACTATACAGGCAGCACAATCCTTAG
Protein sequenceShow/hide protein sequence
MGCFRIPKGILSKITTLCSRFWWGSQGDRRRMHWKRWEELCKPKEDGGLNFRDLVSFNQAIIAKKFIKHNCQWDLEKLDQHLDRVDVDVIKSLPISSHAPNRWIWHYDRK
GEYSVRSGYKLCIRDGRETSLSYSGVEYSWWINLWKLRVPSKVKHFVWRSFHNSIPTMVNLLNHHVSVNVVCPLCKEENETMDHALFLCDRAQEVWKTLFLAGVGNGWDP
MEIKDRWMWLSRTNGPLLERICVGAWVIWNDKNNLVHNCPIPSVNLRCEWINSYLEEYWQANPKGKPCVQTEEDISNTICNGEDFILHTDAAFMGGSCGSGIGLVLRNKF
DQLYRQHNP